RNA–Protein interactions for RNA: ENST00000355666.5

TTC3-202, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TTC3, Length 7,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-202ENST00000355666 EFCAB2Q5VUJ9 269 aa13.63□□□□□ -0.23
TTC3-202ENST00000355666 KDM2AQ9Y2K7 1162 aa13.62□□□□□ -0.23
TTC3-202ENST00000355666 KIAA0556O60303 1618 aa13.62□□□□□ -0.23
TTC3-202ENST00000355666 PKD2Q13563 968 aa13.62□□□□□ -0.23
TTC3-202ENST00000355666 NUP155O75694 1391 aa13.62□□□□□ -0.23
TTC3-202ENST00000355666 RAPGEF6Q8TEU7 1601 aa13.61□□□□□ -0.23
TTC3-202ENST00000355666 HNRNPMP52272 730 aaKnown RBP eCLIP13.61□□□□□ -0.233e-7■■■■□ 21.6
TTC3-202ENST00000355666 FOXD1Q16676 465 aa13.6□□□□□ -0.23
TTC3-202ENST00000355666 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
TTC3-202ENST00000355666 ZNF644Q9H582 1327 aaPredicted RBP13.59□□□□□ -0.23
TTC3-202ENST00000355666 DAPK1P53355 1430 aa13.59□□□□□ -0.23
TTC3-202ENST00000355666 NAIPQ13075 1403 aa13.58□□□□□ -0.24
TTC3-202ENST00000355666 ROCK1Q13464 1354 aa13.58□□□□□ -0.24
TTC3-202ENST00000355666 PLB1Q6P1J6 1458 aa13.57□□□□□ -0.24
TTC3-202ENST00000355666 KANK1Q14678 1352 aa13.56□□□□□ -0.24
TTC3-202ENST00000355666 HSPA5P11021 654 aaKnown RBP13.56□□□□□ -0.24
TTC3-202ENST00000355666 L3MBTL2Q969R5 705 aa13.56□□□□□ -0.24
TTC3-202ENST00000355666 CARD11Q9BXL7 1154 aa13.55□□□□□ -0.24
TTC3-202ENST00000355666 KIF14Q15058 1648 aa13.55□□□□□ -0.24
TTC3-202ENST00000355666 CCER2I3L3R5 266 aa13.54□□□□□ -0.24
TTC3-202ENST00000355666 NUP153P49790 1475 aaKnown RBP13.54□□□□□ -0.24
TTC3-202ENST00000355666 AKNAQ7Z591 1439 aa13.53□□□□□ -0.24
TTC3-202ENST00000355666 ANKRD50Q9ULJ7 1429 aa13.53□□□□□ -0.24
TTC3-202ENST00000355666 NUP160Q12769 1436 aa13.52□□□□□ -0.24
TTC3-202ENST00000355666 DISP1Q96F81 1524 aa13.52□□□□□ -0.25
TTC3-202ENST00000355666 CAMSAP2Q08AD1 1489 aa13.52□□□□□ -0.25
TTC3-202ENST00000355666 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
TTC3-202ENST00000355666 HNRNPUQ00839 825 aaKnown RBP eCLIP13.52□□□□□ -0.25
TTC3-202ENST00000355666 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
TTC3-202ENST00000355666 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
TTC3-202ENST00000355666 KIF15Q9NS87 1388 aa13.51□□□□□ -0.25
TTC3-202ENST00000355666 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
TTC3-202ENST00000355666 PLEKHH2Q8IVE3 1493 aa13.5□□□□□ -0.25
TTC3-202ENST00000355666 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
TTC3-202ENST00000355666 ITSN2Q9NZM3 1697 aa13.5□□□□□ -0.25
TTC3-202ENST00000355666 CHGAP10645 457 aaKnown RBP13.5□□□□□ -0.25
TTC3-202ENST00000355666 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
TTC3-202ENST00000355666 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
TTC3-202ENST00000355666 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
TTC3-202ENST00000355666 ABCC5O15440 1437 aa13.49□□□□□ -0.25
TTC3-202ENST00000355666 FAM9BQ8IZU0 186 aa13.47□□□□□ -0.25
TTC3-202ENST00000355666 MAPKBP1O60336 1514 aa13.47□□□□□ -0.25
TTC3-202ENST00000355666 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
TTC3-202ENST00000355666 ARHGEF11O15085 1522 aa13.45□□□□□ -0.26
TTC3-202ENST00000355666 PTPRKQ15262 1439 aa13.45□□□□□ -0.26
TTC3-202ENST00000355666 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
TTC3-202ENST00000355666 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
TTC3-202ENST00000355666 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
TTC3-202ENST00000355666 CDCA8Q53HL2 280 aa13.43□□□□□ -0.26
TTC3-202ENST00000355666 ESF1Q9H501 851 aaKnown RBP13.43□□□□□ -0.26
TTC3-202ENST00000355666 BCANQ96GW7 911 aa13.43□□□□□ -0.26
TTC3-202ENST00000355666 KIAA1107Q9UPP5 1409 aa13.42□□□□□ -0.26
TTC3-202ENST00000355666 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
TTC3-202ENST00000355666 CCDC141Q6ZP82 1450 aa13.41□□□□□ -0.26
TTC3-202ENST00000355666 ATP10BO94823 1461 aa13.41□□□□□ -0.26
TTC3-202ENST00000355666 FKBP8Q14318 412 aa13.4□□□□□ -0.26
TTC3-202ENST00000355666 STAG3Q9UJ98 1225 aa13.4□□□□□ -0.26
TTC3-202ENST00000355666 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
TTC3-202ENST00000355666 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
TTC3-202ENST00000355666 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
TTC3-202ENST00000355666 DNMT1P26358 1616 aaKnown RBP13.38□□□□□ -0.27
TTC3-202ENST00000355666 SLC24A1O60721 1099 aa13.38□□□□□ -0.27
TTC3-202ENST00000355666 KIF3BO15066 747 aa13.37□□□□□ -0.27
TTC3-202ENST00000355666 TMF1P82094 1093 aa13.36□□□□□ -0.27
TTC3-202ENST00000355666 USP47Q96K76 1375 aa13.35□□□□□ -0.27
TTC3-202ENST00000355666 ANKRD30BQ9BXX2 1392 aa13.35□□□□□ -0.27
TTC3-202ENST00000355666 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
TTC3-202ENST00000355666 SHANK2Q9UPX8 1470 aa13.33□□□□□ -0.28
TTC3-202ENST00000355666 ARID4BQ4LE39 1312 aaPredicted RBP13.32□□□□□ -0.28
TTC3-202ENST00000355666 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
TTC3-202ENST00000355666 EIF3AQ14152 1382 aaKnown RBP13.31□□□□□ -0.28
TTC3-202ENST00000355666 GGT6Q6P531 493 aa13.3□□□□□ -0.28
TTC3-202ENST00000355666 ABCC2Q92887 1545 aa13.3□□□□□ -0.28
TTC3-202ENST00000355666 RPRD2Q5VT52 1461 aaKnown RBP13.3□□□□□ -0.28
TTC3-202ENST00000355666 ABCA8O94911 1581 aa13.3□□□□□ -0.28
TTC3-202ENST00000355666 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
TTC3-202ENST00000355666 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
TTC3-202ENST00000355666 CNTLNQ9NXG0 1405 aa13.29□□□□□ -0.28
TTC3-202ENST00000355666 STAC3Q96MF2 364 aa13.29□□□□□ -0.28
TTC3-202ENST00000355666 RALBP1Q15311 655 aa13.28□□□□□ -0.28
TTC3-202ENST00000355666 KTN1Q86UP2 1357 aaKnown RBP13.27□□□□□ -0.28
TTC3-202ENST00000355666 ADGRL2O95490 1459 aa13.27□□□□□ -0.28
TTC3-202ENST00000355666 AFAP1Q8N556 730 aa13.27□□□□□ -0.29
TTC3-202ENST00000355666 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
TTC3-202ENST00000355666 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
TTC3-202ENST00000355666 WASHC2AQ641Q2 1341 aa13.26□□□□□ -0.29
TTC3-202ENST00000355666 CHD1O14646 1710 aa13.26□□□□□ -0.29
TTC3-202ENST00000355666 PLCH2O75038 1416 aa13.25□□□□□ -0.29
TTC3-202ENST00000355666 NBPF8Q3BBV2 869 aa13.25□□□□□ -0.29
TTC3-202ENST00000355666 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
TTC3-202ENST00000355666 WASHC2CQ9Y4E1 1318 aa13.25□□□□□ -0.29
TTC3-202ENST00000355666 PRKRIP1Q9H875 184 aaPredicted RBP13.24□□□□□ -0.29
TTC3-202ENST00000355666 SYCP2Q9BX26 1530 aa13.23□□□□□ -0.29
TTC3-202ENST00000355666 SUPT16HQ9Y5B9 1047 aaKnown RBP13.23□□□□□ -0.29
TTC3-202ENST00000355666 LRRIQ1Q96JM4 1722 aa13.22□□□□□ -0.29
TTC3-202ENST00000355666 SCAPERQ9BY12 1400 aa13.22□□□□□ -0.29
TTC3-202ENST00000355666 ADCY10Q96PN6 1610 aa13.22□□□□□ -0.29
TTC3-202ENST00000355666 ABCC10Q5T3U5 1492 aa13.21□□□□□ -0.29
TTC3-202ENST00000355666 NEFMP07197 916 aa13.21□□□□□ -0.3
TTC3-202ENST00000355666 DUOX2Q9NRD8 1548 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms