RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 RTF1Q92541 710 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-202ENST00000355451 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
NUDCD3-202ENST00000355451 FRAT1Q92837 279 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-202ENST00000355451 PAF1Q8N7H5 531 aa14.61□□□□□ -0.07
NUDCD3-202ENST00000355451 VSIG10Q8N0Z9 540 aa14.61□□□□□ -0.07
NUDCD3-202ENST00000355451 CDCA8Q53HL2 280 aa14.6□□□□□ -0.07
NUDCD3-202ENST00000355451 PPP4R2Q9NY27 417 aa14.6□□□□□ -0.07
NUDCD3-202ENST00000355451 PES1O00541 588 aaKnown RBP14.6□□□□□ -0.07
NUDCD3-202ENST00000355451 RAD21O60216 631 aa14.6□□□□□ -0.07
NUDCD3-202ENST00000355451 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
NUDCD3-202ENST00000355451 MLECQ14165 292 aa14.59□□□□□ -0.07
NUDCD3-202ENST00000355451 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-202ENST00000355451 MEX3CQ5U5Q3 659 aaKnown RBP14.57□□□□□ -0.08
NUDCD3-202ENST00000355451 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
NUDCD3-202ENST00000355451 HTATSF1O43719 755 aaKnown RBP14.56□□□□□ -0.08
NUDCD3-202ENST00000355451 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
NUDCD3-202ENST00000355451 TPM3P06753 285 aa14.55□□□□□ -0.08
NUDCD3-202ENST00000355451 ABCC9O60706 1549 aa14.54□□□□□ -0.08
NUDCD3-202ENST00000355451 HSCBQ8IWL3 235 aa14.54□□□□□ -0.08
NUDCD3-202ENST00000355451 TOMM22Q9NS69 142 aa14.53□□□□□ -0.08
NUDCD3-202ENST00000355451 MS4A1P11836 297 aa14.53□□□□□ -0.08
NUDCD3-202ENST00000355451 RGS3P49796 1198 aa14.52□□□□□ -0.09
NUDCD3-202ENST00000355451 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
NUDCD3-202ENST00000355451 SRPK2P78362 688 aaKnown RBP14.51□□□□□ -0.09
NUDCD3-202ENST00000355451 TPD52L1Q16890 204 aaPredicted RBP14.51□□□□□ -0.09
NUDCD3-202ENST00000355451 TSR1Q2NL82 804 aaKnown RBP14.51□□□□□ -0.09
NUDCD3-202ENST00000355451 APBB1O00213 710 aa14.51□□□□□ -0.09
NUDCD3-202ENST00000355451 ARID3AQ99856 593 aa14.5□□□□□ -0.09
NUDCD3-202ENST00000355451 GPATCH3Q96I76 525 aa14.5□□□□□ -0.09
NUDCD3-202ENST00000355451 CCDC43Q96MW1 224 aaKnown RBP14.5□□□□□ -0.09
NUDCD3-202ENST00000355451 ACIN1Q9UKV3 1341 aaKnown RBP14.49□□□□□ -0.09
NUDCD3-202ENST00000355451 PPM1FP49593 454 aaPredicted RBP14.49□□□□□ -0.09
NUDCD3-202ENST00000355451 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
NUDCD3-202ENST00000355451 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
NUDCD3-202ENST00000355451 CCAR1Q8IX12 1150 aaKnown RBP14.47□□□□□ -0.09
NUDCD3-202ENST00000355451 TPM2P07951 284 aa14.47□□□□□ -0.09
NUDCD3-202ENST00000355451 ODF2Q5BJF6 829 aa14.47□□□□□ -0.09
NUDCD3-202ENST00000355451 NOL10Q9BSC4 688 aaKnown RBP14.47□□□□□ -0.09
NUDCD3-202ENST00000355451 SPRYD3Q8NCJ5 442 aa14.47□□□□□ -0.09
NUDCD3-202ENST00000355451 RTN4Q9NQC3 1192 aaKnown RBP14.46□□□□□ -0.09
NUDCD3-202ENST00000355451 AMOTL1Q8IY63 956 aa14.45□□□□□ -0.1
NUDCD3-202ENST00000355451 CFAP44Q96MT7 982 aa14.45□□□□□ -0.1
NUDCD3-202ENST00000355451 WWC2Q6AWC2 1192 aa14.45□□□□□ -0.1
NUDCD3-202ENST00000355451 SAMD1Q6SPF0 538 aaPredicted RBP14.45□□□□□ -0.1
NUDCD3-202ENST00000355451 AK7Q96M32 723 aa14.44□□□□□ -0.1
NUDCD3-202ENST00000355451 MTUS2Q5JR59 1369 aa14.43□□□□□ -0.1
NUDCD3-202ENST00000355451 CCDC97Q96F63 343 aaPredicted RBP14.42□□□□□ -0.1
NUDCD3-202ENST00000355451 AKAP17AQ02040 695 aaKnown RBP14.41□□□□□ -0.1
NUDCD3-202ENST00000355451 CCDC70Q6NSX1 233 aa14.41□□□□□ -0.1
NUDCD3-202ENST00000355451 WDR70Q9NW82 654 aa14.41□□□□□ -0.1
NUDCD3-202ENST00000355451 CT47A1Q5JQC4 288 aaPredicted RBP14.4□□□□□ -0.1
NUDCD3-202ENST00000355451 HIRIP3Q9BW71 556 aaPredicted RBP14.39□□□□□ -0.11
NUDCD3-202ENST00000355451 EVA1CP58658 441 aa14.39□□□□□ -0.11
NUDCD3-202ENST00000355451 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 SAFB2Q14151 953 aaKnown RBP eCLIP14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 PCMTD1Q96MG8 357 aaPredicted RBP14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 SF3A1Q15459 793 aaKnown RBP14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 TMEM132AQ24JP5 1023 aa14.38□□□□□ -0.11
NUDCD3-202ENST00000355451 ZFYVE27Q5T4F4 411 aa14.37□□□□□ -0.11
NUDCD3-202ENST00000355451 TRIM6-TRIM34B2RNG4 842 aa14.37□□□□□ -0.11
NUDCD3-202ENST00000355451 DHX16O60231 1041 aaKnown RBP14.37□□□□□ -0.11
NUDCD3-202ENST00000355451 CCAR2Q8N163 923 aaKnown RBP14.37□□□□□ -0.11
NUDCD3-202ENST00000355451 RRP7BPQ9NSQ0 103 aa14.36□□□□□ -0.11
NUDCD3-202ENST00000355451 TPM1P09493 284 aa14.36□□□□□ -0.11
NUDCD3-202ENST00000355451 CC2D1BQ5T0F9 858 aaKnown RBP14.34□□□□□ -0.11
NUDCD3-202ENST00000355451 PPP1R1BQ9UD71 204 aaPredicted RBP14.34□□□□□ -0.11
NUDCD3-202ENST00000355451 SPAG9O60271 1321 aaKnown RBP14.34□□□□□ -0.11
NUDCD3-202ENST00000355451 CSPP1Q1MSJ5 1256 aa14.34□□□□□ -0.11
NUDCD3-202ENST00000355451 VPS37DQ86XT2 251 aa14.34□□□□□ -0.11
NUDCD3-202ENST00000355451 CHMP4AQ9BY43 222 aa14.33□□□□□ -0.12
NUDCD3-202ENST00000355451 FOXD1Q16676 465 aa14.32□□□□□ -0.12
NUDCD3-202ENST00000355451 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
NUDCD3-202ENST00000355451 STK26Q9P289 416 aa14.31□□□□□ -0.12
NUDCD3-202ENST00000355451 KAT6BQ8WYB5 2073 aa14.31□□□□□ -0.12
NUDCD3-202ENST00000355451 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
NUDCD3-202ENST00000355451 KIF3AQ9Y496 699 aa14.3□□□□□ -0.12
NUDCD3-202ENST00000355451 KANK1Q14678 1352 aa14.29□□□□□ -0.12
NUDCD3-202ENST00000355451 HMMRO75330 724 aa14.29□□□□□ -0.12
NUDCD3-202ENST00000355451 STK31Q9BXU1 1019 aa14.29□□□□□ -0.12
NUDCD3-202ENST00000355451 SYNE3Q6ZMZ3 975 aa14.29□□□□□ -0.12
NUDCD3-202ENST00000355451 IPO7O95373 1038 aaKnown RBP14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 H3BQV1 296 aa14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 CCDC47Q96A33 483 aaKnown RBP14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 HSP90AB2PQ58FF8 381 aa14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 GBP4Q96PP9 640 aa14.28□□□□□ -0.12
NUDCD3-202ENST00000355451 PTMSP20962 102 aa14.27□□□□□ -0.12
NUDCD3-202ENST00000355451 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.12
NUDCD3-202ENST00000355451 SYTL4Q96C24 671 aaPredicted RBP14.26□□□□□ -0.13
NUDCD3-202ENST00000355451 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
NUDCD3-202ENST00000355451 IPO8O15397 1037 aaKnown RBP14.26□□□□□ -0.13
NUDCD3-202ENST00000355451 CALD1Q05682 793 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 KIF16BQ96L93 1317 aa14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 APPP05067 770 aa14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 EPS15P42566 896 aa14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 SF3B2Q13435 895 aaKnown RBP14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 MORC1Q86VD1 984 aa14.25□□□□□ -0.13
NUDCD3-202ENST00000355451 GPS2Q13227 327 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms