RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 C16orf71Q8IYS4 520 aaPredicted RBP6.64□□□□□ -1.35
CKAP5-202ENST00000354558 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
CKAP5-202ENST00000354558 BAZ1BQ9UIG0 1483 aaKnown RBP6.64□□□□□ -1.35
CKAP5-202ENST00000354558 FAM69CQ0P6D2 419 aa6.64□□□□□ -1.35
CKAP5-202ENST00000354558 WASHC2AQ641Q2 1341 aa6.64□□□□□ -1.35
CKAP5-202ENST00000354558 MARCH6O60337 910 aa6.63□□□□□ -1.35
CKAP5-202ENST00000354558 TRIM44Q96DX7 344 aaPredicted RBP6.62□□□□□ -1.35
CKAP5-202ENST00000354558 CECR2Q9BXF3 1484 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 WWC1Q8IX03 1113 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 CARMIL2Q6F5E8 1435 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 AMPHP49418 695 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 RBM33Q96EV2 1170 aaKnown RBP6.61□□□□□ -1.35
CKAP5-202ENST00000354558 HRCP23327 699 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 FBXO3Q9UK99 471 aa6.61□□□□□ -1.35
CKAP5-202ENST00000354558 AMOTL1Q8IY63 956 aa6.6□□□□□ -1.35
CKAP5-202ENST00000354558 KIAA2012Q0VF49 1180 aa6.6□□□□□ -1.35
CKAP5-202ENST00000354558 CCNB3Q8WWL7 1395 aa6.6□□□□□ -1.35
CKAP5-202ENST00000354558 WASHC2CQ9Y4E1 1318 aa6.6□□□□□ -1.35
CKAP5-202ENST00000354558 PSME1Q06323 249 aa6.59□□□□□ -1.35
CKAP5-202ENST00000354558 SPDYE4A6NLX3 237 aa6.59□□□□□ -1.36
CKAP5-202ENST00000354558 C1orf141Q5JVX7 400 aa6.59□□□□□ -1.36
CKAP5-202ENST00000354558 WDR70Q9NW82 654 aa6.59□□□□□ -1.36
CKAP5-202ENST00000354558 TOMM22Q9NS69 142 aa6.58□□□□□ -1.36
CKAP5-202ENST00000354558 CARD11Q9BXL7 1154 aa6.58□□□□□ -1.36
CKAP5-202ENST00000354558 MAP3K9P80192 1104 aa6.58□□□□□ -1.36
CKAP5-202ENST00000354558 VPS37DQ86XT2 251 aa6.58□□□□□ -1.36
CKAP5-202ENST00000354558 PDS5BQ9NTI5 1447 aa6.57□□□□□ -1.36
CKAP5-202ENST00000354558 DDRGK1Q96HY6 314 aa6.57□□□□□ -1.36
CKAP5-202ENST00000354558 RASSF8Q8NHQ8 419 aa6.57□□□□□ -1.36
CKAP5-202ENST00000354558 GOLGA6L6A8MZA4 724 aa6.57□□□□□ -1.36
CKAP5-202ENST00000354558 HNRNPUQ00839 825 aaKnown RBP eCLIP6.57□□□□□ -1.36
CKAP5-202ENST00000354558 SPAG9O60271 1321 aaKnown RBP6.57□□□□□ -1.36
CKAP5-202ENST00000354558 PPM1FP49593 454 aaPredicted RBP6.57□□□□□ -1.36
CKAP5-202ENST00000354558 GRM1Q13255 1194 aa6.56□□□□□ -1.36
CKAP5-202ENST00000354558 WDHD1O75717 1129 aaPredicted RBP6.56□□□□□ -1.36
CKAP5-202ENST00000354558 CC2D1BQ5T0F9 858 aaKnown RBP6.56□□□□□ -1.36
CKAP5-202ENST00000354558 MORC1Q86VD1 984 aa6.56□□□□□ -1.36
CKAP5-202ENST00000354558 TTC5Q8N0Z6 440 aa6.56□□□□□ -1.36
CKAP5-202ENST00000354558 EFCAB2Q5VUJ9 269 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 NGEFQ8N5V2 710 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 KIF3BO15066 747 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 USP35Q9P2H5 1018 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 WWC2Q6AWC2 1192 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 CHMP4BQ9H444 224 aaKnown RBP6.55□□□□□ -1.36
CKAP5-202ENST00000354558 EIF5BO60841 1220 aaKnown RBP6.55□□□□□ -1.36
CKAP5-202ENST00000354558 CHAF1AQ13111 956 aaPredicted RBP6.55□□□□□ -1.36
CKAP5-202ENST00000354558 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
CKAP5-202ENST00000354558 ZCCHC6Q5VYS8 1495 aaKnown RBP6.55□□□□□ -1.36
CKAP5-202ENST00000354558 NOC3LQ8WTT2 800 aaKnown RBP6.54□□□□□ -1.36
CKAP5-202ENST00000354558 FRAT1Q92837 279 aaPredicted RBP6.54□□□□□ -1.36
CKAP5-202ENST00000354558 STRN4Q9NRL3 753 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 CCDC43Q96MW1 224 aaKnown RBP6.53□□□□□ -1.36
CKAP5-202ENST00000354558 DHX16O60231 1041 aaKnown RBP6.53□□□□□ -1.36
CKAP5-202ENST00000354558 TMEM132AQ24JP5 1023 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 TMEM87AQ8NBN3 555 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 APBB1O00213 710 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 MYCNP04198 464 aaPredicted RBP6.53□□□□□ -1.36
CKAP5-202ENST00000354558 IBSPP21815 317 aaPredicted RBP6.53□□□□□ -1.36
CKAP5-202ENST00000354558 TTLL12Q14166 644 aaPredicted RBP6.53□□□□□ -1.36
CKAP5-202ENST00000354558 CCDC180Q9P1Z9 1646 aa6.53□□□□□ -1.36
CKAP5-202ENST00000354558 GOLGA6L22H0YM25 854 aa6.52□□□□□ -1.36
CKAP5-202ENST00000354558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.52□□□□□ -1.36
CKAP5-202ENST00000354558 SENP3-EIF4A1A0A087X0R7 540 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 SLC4A3P48751 1232 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 PDE3BQ13370 1112 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 PAF1Q8N7H5 531 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 GPATCH3Q96I76 525 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 GOLGA6L4A6NEF3 574 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 PLCB2Q00722 1185 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 PPP4R2Q9NY27 417 aa6.52□□□□□ -1.37
CKAP5-202ENST00000354558 HSP90B1P14625 803 aaKnown RBP6.52□□□□□ -1.37
CKAP5-202ENST00000354558 DDX10Q13206 875 aaKnown RBP6.52□□□□□ -1.37
CKAP5-202ENST00000354558 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 PTMAP06454 111 aaKnown RBP6.51□□□□□ -1.37
CKAP5-202ENST00000354558 TMF1P82094 1093 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 PROSER2Q86WR7 435 aaPredicted RBP6.51□□□□□ -1.37
CKAP5-202ENST00000354558 VSIG10Q8N0Z9 540 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 CCDC136Q96JN2 1154 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 CHMP4AQ9BY43 222 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 MCCP23508 829 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 L1TD1Q5T7N2 865 aaKnown RBP6.51□□□□□ -1.37
CKAP5-202ENST00000354558 DCAF11Q8TEB1 546 aa6.51□□□□□ -1.37
CKAP5-202ENST00000354558 SMARCA2P51531 1590 aa6.5□□□□□ -1.37
CKAP5-202ENST00000354558 KIAA1211Q6ZU35 1233 aa6.5□□□□□ -1.37
CKAP5-202ENST00000354558 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.5□□□□□ -1.375e-7■■■■■ 78.6
CKAP5-202ENST00000354558 ACIN1Q9UKV3 1341 aaKnown RBP6.5□□□□□ -1.37
CKAP5-202ENST00000354558 IKQ13123 557 aaPredicted RBP6.5□□□□□ -1.37
CKAP5-202ENST00000354558 CREBRFQ8IUR6 639 aa6.5□□□□□ -1.37
CKAP5-202ENST00000354558 R3HCC1Q9Y3T6 440 aaKnown RBP6.5□□□□□ -1.37
CKAP5-202ENST00000354558 PLCD3Q8N3E9 789 aa6.49□□□□□ -1.37
CKAP5-202ENST00000354558 KIF27Q86VH2 1401 aa6.49□□□□□ -1.37
CKAP5-202ENST00000354558 HIRIP3Q9BW71 556 aaPredicted RBP6.49□□□□□ -1.37
CKAP5-202ENST00000354558 RBM5P52756 815 aaKnown RBP eCLIP6.49□□□□□ -1.37
CKAP5-202ENST00000354558 FAM177BA6PVY3 158 aa6.48□□□□□ -1.37
CKAP5-202ENST00000354558 BECN1Q14457 450 aa6.48□□□□□ -1.37
CKAP5-202ENST00000354558 MS4A1P11836 297 aa6.48□□□□□ -1.37
CKAP5-202ENST00000354558 CALD1Q05682 793 aaKnown RBP6.48□□□□□ -1.37
CKAP5-202ENST00000354558 TERF2IPQ9NYB0 399 aa6.48□□□□□ -1.37
CKAP5-202ENST00000354558 CLEC11AQ9Y240 323 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms