RNA–Protein interactions for RNA: ENST00000350771.7

H2AFV-204, Transcript of H2A histone family member V, humanhuman

TSL 2 BASIC

Gene H2AFV, Length 687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-204ENST00000350771 CDC42BPAQ5VT25 1732 aa41.01■■■■■ 4.16
H2AFV-204ENST00000350771 FRMPD1Q5SYB0 1578 aa40.97■■■■■ 4.15
H2AFV-204ENST00000350771 EFCAB2Q5VUJ9 269 aa40.97■■■■■ 4.15
H2AFV-204ENST00000350771 ARHGAP5Q13017 1502 aa40.97■■■■■ 4.15
H2AFV-204ENST00000350771 GPATCH8Q9UKJ3 1502 aaKnown RBP40.93■■■■■ 4.14
H2AFV-204ENST00000350771 RICTORQ6R327 1708 aa40.93■■■■■ 4.14
H2AFV-204ENST00000350771 LRRC9Q6ZRR7 1453 aa40.93■■■■■ 4.14
H2AFV-204ENST00000350771 DENND4BO75064 1496 aaPredicted RBP40.92■■■■■ 4.14
H2AFV-204ENST00000350771 SUPT6HQ7KZ85 1726 aaKnown RBP40.88■■■■■ 4.13
H2AFV-204ENST00000350771 RAPGEF3O95398 923 aa40.87■■■■■ 4.13
H2AFV-204ENST00000350771 SCAPERQ9BY12 1400 aa40.84■■■■■ 4.13
H2AFV-204ENST00000350771 CCNB3Q8WWL7 1395 aa40.83■■■■■ 4.13
H2AFV-204ENST00000350771 NCOA2Q15596 1464 aa40.83■■■■■ 4.13
H2AFV-204ENST00000350771 POGZQ7Z3K3 1410 aa40.82■■■■■ 4.12
H2AFV-204ENST00000350771 ZMYM4Q5VZL5 1548 aa40.82■■■■■ 4.12
H2AFV-204ENST00000350771 ABCC1P33527 1531 aa40.8■■■■■ 4.12
H2AFV-204ENST00000350771 ITSN2Q9NZM3 1697 aa40.79■■■■■ 4.12
H2AFV-204ENST00000350771 KANK4Q5T7N3 995 aaPredicted RBP40.77■■■■■ 4.12
H2AFV-204ENST00000350771 SAMD9LQ8IVG5 1584 aa40.74■■■■■ 4.11
H2AFV-204ENST00000350771 ARHGEF12Q9NZN5 1544 aa40.71■■■■■ 4.11
H2AFV-204ENST00000350771 ZNF518AQ6AHZ1 1483 aa40.7■■■■■ 4.11
H2AFV-204ENST00000350771 KDM5CP41229 1560 aa40.69■■■■■ 4.11
H2AFV-204ENST00000350771 APLP2Q06481 763 aa40.69■■■■■ 4.1
H2AFV-204ENST00000350771 CFDP1Q9UEE9 299 aaPredicted RBP40.69■■■■■ 4.1
H2AFV-204ENST00000350771 MAGI2Q86UL8 1455 aa40.69■■■■■ 4.1
H2AFV-204ENST00000350771 ARHGEF40Q8TER5 1519 aa40.67■■■■■ 4.1
H2AFV-204ENST00000350771 PLEKHH2Q8IVE3 1493 aa40.65■■■■■ 4.1
H2AFV-204ENST00000350771 KIAA1107Q9UPP5 1409 aa40.65■■■■■ 4.1
H2AFV-204ENST00000350771 TRAPPC8Q9Y2L5 1435 aa40.6■■■■■ 4.09
H2AFV-204ENST00000350771 SYCP2Q9BX26 1530 aa40.6■■■■■ 4.09
H2AFV-204ENST00000350771 ZFYVE16Q7Z3T8 1539 aa40.59■■■■■ 4.09
H2AFV-204ENST00000350771 ZNF777Q9ULD5 760 aaPredicted RBP40.57■■■■■ 4.09
H2AFV-204ENST00000350771 AFAP1Q8N556 730 aa40.56■■■■■ 4.08
H2AFV-204ENST00000350771 ADAMTSL3P82987 1691 aa40.54■■■■■ 4.08
H2AFV-204ENST00000350771 YEATS2Q9ULM3 1422 aa40.54■■■■■ 4.08
H2AFV-204ENST00000350771 HECW2Q9P2P5 1572 aa40.53■■■■■ 4.08
H2AFV-204ENST00000350771 MLH3Q9UHC1 1453 aa40.53■■■■■ 4.08
H2AFV-204ENST00000350771 MYOM3Q5VTT5 1437 aa40.51■■■■■ 4.08
H2AFV-204ENST00000350771 ARID4BQ4LE39 1312 aaPredicted RBP40.51■■■■■ 4.08
H2AFV-204ENST00000350771 BCORL1Q5H9F3 1711 aa40.5■■■■■ 4.07
H2AFV-204ENST00000350771 ZNF644Q9H582 1327 aaPredicted RBP40.49■■■■■ 4.07
H2AFV-204ENST00000350771 MBD5Q9P267 1494 aa40.49■■■■■ 4.07
H2AFV-204ENST00000350771 MIA2Q96PC5 1412 aa40.48■■■■■ 4.07
H2AFV-204ENST00000350771 CAMSAP2Q08AD1 1489 aa40.47■■■■■ 4.07
H2AFV-204ENST00000350771 HNRNPMP52272 730 aaKnown RBP eCLIP40.45■■■■■ 4.073e-6■□□□□ 11
H2AFV-204ENST00000350771 KIDINS220Q9ULH0 1771 aa40.43■■■■■ 4.06
H2AFV-204ENST00000350771 ATP10AO60312 1499 aa40.41■■■■■ 4.06
H2AFV-204ENST00000350771 DIP2CQ9Y2E4 1556 aa40.4■■■■■ 4.06
H2AFV-204ENST00000350771 PTPRMP28827 1452 aa40.4■■■■■ 4.06
H2AFV-204ENST00000350771 ABCA6Q8N139 1617 aa40.38■■■■■ 4.06
H2AFV-204ENST00000350771 SIGLEC1Q9BZZ2 1709 aa40.38■■■■■ 4.05
H2AFV-204ENST00000350771 INO80Q9ULG1 1556 aaPredicted RBP40.37■■■■■ 4.05
H2AFV-204ENST00000350771 ARHGEF5Q12774 1597 aa40.36■■■■■ 4.05
H2AFV-204ENST00000350771 REREQ9P2R6 1566 aa40.36■■■■■ 4.05
H2AFV-204ENST00000350771 C9orf84Q5VXU9 1444 aa40.36■■■■■ 4.05
H2AFV-204ENST00000350771 MADDQ8WXG6 1647 aa40.35■■■■■ 4.05
H2AFV-204ENST00000350771 CCDC141Q6ZP82 1450 aa40.32■■■■■ 4.05
H2AFV-204ENST00000350771 SPAG9O60271 1321 aaKnown RBP40.32■■■■■ 4.04
H2AFV-204ENST00000350771 ATP7AQ04656 1500 aa40.32■■■■■ 4.04
H2AFV-204ENST00000350771 RSPH4AQ5TD94 716 aa40.3■■■■■ 4.04
H2AFV-204ENST00000350771 FGD6Q6ZV73 1430 aa40.28■■■■■ 4.04
H2AFV-204ENST00000350771 PTPN23Q9H3S7 1636 aa40.26■■■■■ 4.04
H2AFV-204ENST00000350771 RTEL1-TNFRSF6BF6WH68 1400 aa40.25■■■■■ 4.03
H2AFV-204ENST00000350771 TCOF1Q13428 1488 aaKnown RBP40.25■■■■■ 4.03
H2AFV-204ENST00000350771 RIMS1Q86UR5 1692 aaKnown RBP40.24■■■■■ 4.03
H2AFV-204ENST00000350771 MYT1LQ9UL68 1186 aa40.22■■■■■ 4.03
H2AFV-204ENST00000350771 AGLP35573 1532 aa40.2■■■■■ 4.03
H2AFV-204ENST00000350771 MAST1Q9Y2H9 1570 aa40.15■■■■■ 4.02
H2AFV-204ENST00000350771 ADGBQ8N7X0 1667 aa40.15■■■■■ 4.02
H2AFV-204ENST00000350771 PLXNC1O60486 1568 aa40.14■■■■■ 4.02
H2AFV-204ENST00000350771 FER1L4A9Z1Z3 1794 aa40.11■■■■■ 4.01
H2AFV-204ENST00000350771 A2MP01023 1474 aa40.09■■■■■ 4.01
H2AFV-204ENST00000350771 MLECQ14165 292 aa40.08■■■■■ 4.01
H2AFV-204ENST00000350771 DNMT1P26358 1616 aaKnown RBP40.07■■■■■ 4.01
H2AFV-204ENST00000350771 CROCC2H7BZ55 1655 aa40.07■■■■■ 4
H2AFV-204ENST00000350771 TSPY4P0CV99 314 aa40.06■■■■■ 4
H2AFV-204ENST00000350771 TSPY10P0CW01 314 aa40.06■■■■■ 4
H2AFV-204ENST00000350771 SHANK2Q9UPX8 1470 aa40.06■■■■■ 4
H2AFV-204ENST00000350771 ABCC5O15440 1437 aa40.05■■■■■ 4
H2AFV-204ENST00000350771 DAPK1P53355 1430 aa40■■■■□ 3.99
H2AFV-204ENST00000350771 DHX29Q7Z478 1369 aaKnown RBP39.97■■■■□ 3.99
H2AFV-204ENST00000350771 PPARGC1BQ86YN6 1023 aaKnown RBP39.97■■■■□ 3.99
H2AFV-204ENST00000350771 LMTK3Q96Q04 1460 aa39.96■■■■□ 3.99
H2AFV-204ENST00000350771 PLPPR3Q6T4P5 718 aa39.93■■■■□ 3.98
H2AFV-204ENST00000350771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.88■■■■□ 3.971e-30■■■□□ 14.6
H2AFV-204ENST00000350771 ILDR1Q86SU0 546 aaPredicted RBP39.86■■■■□ 3.97
H2AFV-204ENST00000350771 FAM50AQ14320 339 aaKnown RBP39.85■■■■□ 3.97
H2AFV-204ENST00000350771 RRBP1Q9P2E9 1410 aaKnown RBP39.82■■■■□ 3.96
H2AFV-204ENST00000350771 ADGRL2O95490 1459 aa39.81■■■■□ 3.96
H2AFV-204ENST00000350771 DUOX2Q9NRD8 1548 aa39.81■■■■□ 3.96
H2AFV-204ENST00000350771 EIF2AK4Q9P2K8 1649 aaKnown RBP39.8■■■■□ 3.96
H2AFV-204ENST00000350771 SETD1BQ9UPS6 1966 aaKnown RBP39.79■■■■□ 3.96
H2AFV-204ENST00000350771 CNTLNQ9NXG0 1405 aa39.77■■■■□ 3.96
H2AFV-204ENST00000350771 KIF15Q9NS87 1388 aa39.76■■■■□ 3.96
H2AFV-204ENST00000350771 NCOA1Q15788 1441 aa39.75■■■■□ 3.95
H2AFV-204ENST00000350771 PPP6R1Q9UPN7 881 aa39.74■■■■□ 3.95
H2AFV-204ENST00000350771 MROH2AA6NES4 1674 aa39.73■■■■□ 3.95
H2AFV-204ENST00000350771 PREX1Q8TCU6 1659 aa39.73■■■■□ 3.95
H2AFV-204ENST00000350771 ANKRD30AQ9BXX3 1397 aa39.73■■■■□ 3.95
H2AFV-204ENST00000350771 RNF17Q9BXT8 1623 aaKnown RBP39.73■■■■□ 3.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms