RNA–Protein interactions for RNA: ENST00000349736.9

CSNK2A1-202, Transcript of casein kinase 2 alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK2A1, Length 4,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-202ENST00000349736 BIVM-ERCC5R4GMW8 1640 aa12.81□□□□□ -0.36
CSNK2A1-202ENST00000349736 WASHC2AQ641Q2 1341 aa12.81□□□□□ -0.36
CSNK2A1-202ENST00000349736 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
CSNK2A1-202ENST00000349736 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
CSNK2A1-202ENST00000349736 PTPRGP23470 1445 aa12.81□□□□□ -0.36
CSNK2A1-202ENST00000349736 PRDM2Q13029 1718 aa12.8□□□□□ -0.36
CSNK2A1-202ENST00000349736 AFAP1Q8N556 730 aa12.8□□□□□ -0.36
CSNK2A1-202ENST00000349736 SNAPC4Q5SXM2 1469 aa12.79□□□□□ -0.36
CSNK2A1-202ENST00000349736 KIF3BO15066 747 aa12.79□□□□□ -0.36
CSNK2A1-202ENST00000349736 CCDC136Q96JN2 1154 aa12.78□□□□□ -0.36
CSNK2A1-202ENST00000349736 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
CSNK2A1-202ENST00000349736 PLB1Q6P1J6 1458 aa12.77□□□□□ -0.37
CSNK2A1-202ENST00000349736 ANKRD30AQ9BXX3 1397 aa12.76□□□□□ -0.37
CSNK2A1-202ENST00000349736 FYCO1Q9BQS8 1478 aa12.76□□□□□ -0.37
CSNK2A1-202ENST00000349736 NAIPQ13075 1403 aa12.75□□□□□ -0.37
CSNK2A1-202ENST00000349736 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
CSNK2A1-202ENST00000349736 UACAQ9BZF9 1416 aa12.74□□□□□ -0.37
CSNK2A1-202ENST00000349736 PRKRIP1Q9H875 184 aaPredicted RBP12.74□□□□□ -0.37
CSNK2A1-202ENST00000349736 MRC2Q9UBG0 1479 aa12.73□□□□□ -0.37
CSNK2A1-202ENST00000349736 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
CSNK2A1-202ENST00000349736 STK26Q9P289 416 aa12.73□□□□□ -0.37
CSNK2A1-202ENST00000349736 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
CSNK2A1-202ENST00000349736 KIF7Q2M1P5 1343 aa12.72□□□□□ -0.37
CSNK2A1-202ENST00000349736 ROCK2O75116 1388 aaKnown RBP12.72□□□□□ -0.37
CSNK2A1-202ENST00000349736 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.37
CSNK2A1-202ENST00000349736 CANXP27824 592 aaKnown RBP12.71□□□□□ -0.37
CSNK2A1-202ENST00000349736 CYB5RLQ6IPT4 315 aa12.71□□□□□ -0.37
CSNK2A1-202ENST00000349736 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.38
CSNK2A1-202ENST00000349736 PPM1GO15355 546 aaPredicted RBP12.71□□□□□ -0.38
CSNK2A1-202ENST00000349736 SLC24A1O60721 1099 aa12.7□□□□□ -0.38
CSNK2A1-202ENST00000349736 EPRSP07814 1512 aaKnown RBP12.7□□□□□ -0.38
CSNK2A1-202ENST00000349736 KNSTRNQ9Y448 316 aa12.7□□□□□ -0.38
CSNK2A1-202ENST00000349736 SPAG9O60271 1321 aaKnown RBP12.68□□□□□ -0.38
CSNK2A1-202ENST00000349736 NBR1Q14596 966 aa12.68□□□□□ -0.38
CSNK2A1-202ENST00000349736 HFM1A2PYH4 1435 aa12.68□□□□□ -0.38
CSNK2A1-202ENST00000349736 USP47Q96K76 1375 aa12.67□□□□□ -0.38
CSNK2A1-202ENST00000349736 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
CSNK2A1-202ENST00000349736 MAPKBP1O60336 1514 aa12.66□□□□□ -0.38
CSNK2A1-202ENST00000349736 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
CSNK2A1-202ENST00000349736 ESF1Q9H501 851 aaKnown RBP12.66□□□□□ -0.38
CSNK2A1-202ENST00000349736 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
CSNK2A1-202ENST00000349736 PANK3Q9H999 370 aa12.65□□□□□ -0.38
CSNK2A1-202ENST00000349736 TRAK1Q9UPV9 953 aa12.65□□□□□ -0.38
CSNK2A1-202ENST00000349736 PLIN1O60240 522 aa12.65□□□□□ -0.39
CSNK2A1-202ENST00000349736 LAMC3Q9Y6N6 1575 aa12.64□□□□□ -0.39
CSNK2A1-202ENST00000349736 RBM19Q9Y4C8 960 aaKnown RBP12.64□□□□□ -0.39
CSNK2A1-202ENST00000349736 DAXXQ9UER7 740 aaPredicted RBP12.63□□□□□ -0.39
CSNK2A1-202ENST00000349736 SOX12O15370 315 aa12.63□□□□□ -0.39
CSNK2A1-202ENST00000349736 ARID4BQ4LE39 1312 aaPredicted RBP12.63□□□□□ -0.39
CSNK2A1-202ENST00000349736 IFT140Q96RY7 1462 aa12.63□□□□□ -0.39
CSNK2A1-202ENST00000349736 ARHGEF11O15085 1522 aa12.62□□□□□ -0.39
CSNK2A1-202ENST00000349736 TMF1P82094 1093 aa12.62□□□□□ -0.39
CSNK2A1-202ENST00000349736 CCDC7Q96M83 1385 aa12.62□□□□□ -0.39
CSNK2A1-202ENST00000349736 THOC2Q8NI27 1593 aaKnown RBP12.62□□□□□ -0.39
CSNK2A1-202ENST00000349736 EFCAB5A4FU69 1503 aa12.62□□□□□ -0.39
CSNK2A1-202ENST00000349736 DAPK1P53355 1430 aa12.61□□□□□ -0.39
CSNK2A1-202ENST00000349736 ABCC5O15440 1437 aa12.61□□□□□ -0.39
CSNK2A1-202ENST00000349736 NUTM2FA1L443 756 aa12.6□□□□□ -0.39
CSNK2A1-202ENST00000349736 TMEM132EQ6IEE7 984 aa12.6□□□□□ -0.39
CSNK2A1-202ENST00000349736 IQGAP2Q13576 1575 aa12.6□□□□□ -0.39
CSNK2A1-202ENST00000349736 KIAA0586Q9BVV6 1533 aa12.59□□□□□ -0.39
CSNK2A1-202ENST00000349736 CCDC144AA2RUR9 1427 aa12.58□□□□□ -0.4
CSNK2A1-202ENST00000349736 TROQ12816 1431 aaPredicted RBP12.58□□□□□ -0.4
CSNK2A1-202ENST00000349736 GRIN2AQ12879 1464 aa12.58□□□□□ -0.4
CSNK2A1-202ENST00000349736 FRAT1Q92837 279 aaPredicted RBP12.57□□□□□ -0.4
CSNK2A1-202ENST00000349736 PPP4R2Q9NY27 417 aa12.57□□□□□ -0.4
CSNK2A1-202ENST00000349736 RRP7AQ9Y3A4 280 aaKnown RBP12.57□□□□□ -0.4
CSNK2A1-202ENST00000349736 RAPGEF3O95398 923 aa12.57□□□□□ -0.4
CSNK2A1-202ENST00000349736 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
CSNK2A1-202ENST00000349736 CFAP70Q5T0N1 1121 aa12.56□□□□□ -0.4
CSNK2A1-202ENST00000349736 U2SURPO15042 1029 aaKnown RBP12.56□□□□□ -0.4
CSNK2A1-202ENST00000349736 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
CSNK2A1-202ENST00000349736 KIF21AQ7Z4S6 1674 aa12.56□□□□□ -0.4
CSNK2A1-202ENST00000349736 RGS3P49796 1198 aa12.56□□□□□ -0.4
CSNK2A1-202ENST00000349736 EHBP1L1Q8N3D4 1523 aa12.55□□□□□ -0.4
CSNK2A1-202ENST00000349736 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
CSNK2A1-202ENST00000349736 POGKQ9P215 609 aa12.55□□□□□ -0.4
CSNK2A1-202ENST00000349736 PTPN23Q9H3S7 1636 aa12.54□□□□□ -0.4
CSNK2A1-202ENST00000349736 ANKRD30BQ9BXX2 1392 aa12.54□□□□□ -0.4
CSNK2A1-202ENST00000349736 LAS1LQ9Y4W2 734 aaKnown RBP12.54□□□□□ -0.4
CSNK2A1-202ENST00000349736 C9orf84Q5VXU9 1444 aa12.54□□□□□ -0.4
CSNK2A1-202ENST00000349736 ZBTB7CA1YPR0 619 aa12.53□□□□□ -0.4
CSNK2A1-202ENST00000349736 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
CSNK2A1-202ENST00000349736 ANP32AP39687 249 aaKnown RBP12.52□□□□□ -0.41
CSNK2A1-202ENST00000349736 MAGI3Q5TCQ9 1506 aa12.52□□□□□ -0.41
CSNK2A1-202ENST00000349736 MYT1Q01538 1121 aa12.52□□□□□ -0.41
CSNK2A1-202ENST00000349736 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.41
CSNK2A1-202ENST00000349736 NUP153P49790 1475 aaKnown RBP12.52□□□□□ -0.41
CSNK2A1-202ENST00000349736 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
CSNK2A1-202ENST00000349736 CUL7Q14999 1698 aa12.51□□□□□ -0.41
CSNK2A1-202ENST00000349736 SKAP1Q86WV1 359 aa12.51□□□□□ -0.41
CSNK2A1-202ENST00000349736 NCOA1Q15788 1441 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 BCL2L13Q9BXK5 485 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 EXOC6Q8TAG9 804 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 RCAN3Q9UKA8 241 aa12.5□□□□□ -0.41
CSNK2A1-202ENST00000349736 SCAPERQ9BY12 1400 aa12.49□□□□□ -0.41
CSNK2A1-202ENST00000349736 RSPH4AQ5TD94 716 aa12.49□□□□□ -0.41
CSNK2A1-202ENST00000349736 MORC1Q86VD1 984 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms