RNA–Protein interactions for RNA: ENST00000349718.8

CMTM7-202, Transcript of CKLF like MARVEL transmembrane domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene CMTM7, Length 1,214 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM7-202ENST00000349718 CEP162Q5TB80 1403 aa31.84■■■□□ 2.69
CMTM7-202ENST00000349718 CDC42BPBQ9Y5S2 1711 aa31.83■■■□□ 2.69
CMTM7-202ENST00000349718 POGZQ7Z3K3 1410 aa31.81■■■□□ 2.68
CMTM7-202ENST00000349718 PREX2Q70Z35 1606 aa31.79■■■□□ 2.68
CMTM7-202ENST00000349718 ZFYVE16Q7Z3T8 1539 aa31.79■■■□□ 2.68
CMTM7-202ENST00000349718 MAGI2Q86UL8 1455 aa31.78■■■□□ 2.68
CMTM7-202ENST00000349718 ARID4BQ4LE39 1312 aaPredicted RBP31.76■■■□□ 2.68
CMTM7-202ENST00000349718 BCORL1Q5H9F3 1711 aa31.75■■■□□ 2.67
CMTM7-202ENST00000349718 CDC42BPAQ5VT25 1732 aa31.75■■■□□ 2.67
CMTM7-202ENST00000349718 ADAMTSL3P82987 1691 aa31.75■■■□□ 2.67
CMTM7-202ENST00000349718 YEATS2Q9ULM3 1422 aa31.71■■■□□ 2.67
CMTM7-202ENST00000349718 ZNF518AQ6AHZ1 1483 aa31.7■■■□□ 2.66
CMTM7-202ENST00000349718 LOC105371045A0A1W2PR82 267 aa31.67■■■□□ 2.66
CMTM7-202ENST00000349718 MTUS2Q5JR59 1369 aa31.66■■■□□ 2.66
CMTM7-202ENST00000349718 MADDQ8WXG6 1647 aa31.64■■■□□ 2.66
CMTM7-202ENST00000349718 ABCC1P33527 1531 aa31.64■■■□□ 2.66
CMTM7-202ENST00000349718 KDM5CP41229 1560 aa31.64■■■□□ 2.65
CMTM7-202ENST00000349718 ITSN2Q9NZM3 1697 aa31.64■■■□□ 2.65
CMTM7-202ENST00000349718 SIGLEC1Q9BZZ2 1709 aa31.61■■■□□ 2.65
CMTM7-202ENST00000349718 ATP10AO60312 1499 aa31.6■■■□□ 2.65
CMTM7-202ENST00000349718 PTPRMP28827 1452 aa31.6■■■□□ 2.65
CMTM7-202ENST00000349718 AFAP1Q8N556 730 aa31.6■■■□□ 2.65
CMTM7-202ENST00000349718 HECW2Q9P2P5 1572 aa31.6■■■□□ 2.65
CMTM7-202ENST00000349718 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
CMTM7-202ENST00000349718 GPATCH8Q9UKJ3 1502 aaKnown RBP31.59■■■□□ 2.65
CMTM7-202ENST00000349718 MYT1LQ9UL68 1186 aa31.58■■■□□ 2.65
CMTM7-202ENST00000349718 C9orf84Q5VXU9 1444 aa31.58■■■□□ 2.65
CMTM7-202ENST00000349718 RIMS1Q86UR5 1692 aaKnown RBP31.57■■■□□ 2.64
CMTM7-202ENST00000349718 ARHGEF12Q9NZN5 1544 aa31.55■■■□□ 2.64
CMTM7-202ENST00000349718 ZNF777Q9ULD5 760 aaPredicted RBP31.55■■■□□ 2.64
CMTM7-202ENST00000349718 SAMD9LQ8IVG5 1584 aa31.55■■■□□ 2.64
CMTM7-202ENST00000349718 CCNB3Q8WWL7 1395 aa31.55■■■□□ 2.64
CMTM7-202ENST00000349718 TRAPPC8Q9Y2L5 1435 aa31.53■■■□□ 2.64
CMTM7-202ENST00000349718 MLH3Q9UHC1 1453 aa31.52■■■□□ 2.64
CMTM7-202ENST00000349718 CFDP1Q9UEE9 299 aaPredicted RBP31.5■■■□□ 2.63
CMTM7-202ENST00000349718 DIP2CQ9Y2E4 1556 aa31.5■■■□□ 2.63
CMTM7-202ENST00000349718 VPS8Q8N3P4 1428 aa31.49■■■□□ 2.63
CMTM7-202ENST00000349718 FER1L4A9Z1Z3 1794 aa31.49■■■□□ 2.63
CMTM7-202ENST00000349718 MLECQ14165 292 aa31.48■■■□□ 2.63
CMTM7-202ENST00000349718 ABCA6Q8N139 1617 aa31.48■■■□□ 2.63
CMTM7-202ENST00000349718 SYCP2Q9BX26 1530 aa31.47■■■□□ 2.63
CMTM7-202ENST00000349718 TIAM1Q13009 1591 aa31.47■■■□□ 2.63
CMTM7-202ENST00000349718 PLEKHH2Q8IVE3 1493 aa31.46■■■□□ 2.63
CMTM7-202ENST00000349718 SUPT6HQ7KZ85 1726 aaKnown RBP31.45■■■□□ 2.63
CMTM7-202ENST00000349718 REREQ9P2R6 1566 aa31.45■■■□□ 2.63
CMTM7-202ENST00000349718 KIDINS220Q9ULH0 1771 aa31.44■■■□□ 2.62
CMTM7-202ENST00000349718 KIAA1107Q9UPP5 1409 aa31.41■■■□□ 2.62
CMTM7-202ENST00000349718 HNRNPMP52272 730 aaKnown RBP eCLIP31.4■■■□□ 2.62
CMTM7-202ENST00000349718 NCOA2Q15596 1464 aa31.36■■■□□ 2.61
CMTM7-202ENST00000349718 SPAG9O60271 1321 aaKnown RBP31.35■■■□□ 2.61
CMTM7-202ENST00000349718 PLPPR3Q6T4P5 718 aa31.33■■■□□ 2.61
CMTM7-202ENST00000349718 AGLP35573 1532 aa31.33■■■□□ 2.61
CMTM7-202ENST00000349718 ATP7AQ04656 1500 aa31.31■■■□□ 2.6
CMTM7-202ENST00000349718 LRRC9Q6ZRR7 1453 aa31.31■■■□□ 2.6
CMTM7-202ENST00000349718 INO80Q9ULG1 1556 aaPredicted RBP31.3■■■□□ 2.6
CMTM7-202ENST00000349718 MAP3K1Q13233 1512 aa31.29■■■□□ 2.6
CMTM7-202ENST00000349718 ZNF644Q9H582 1327 aaPredicted RBP31.28■■■□□ 2.6
CMTM7-202ENST00000349718 LMTK3Q96Q04 1460 aa31.23■■■□□ 2.59
CMTM7-202ENST00000349718 MBD5Q9P267 1494 aa31.23■■■□□ 2.59
CMTM7-202ENST00000349718 CAMSAP2Q08AD1 1489 aa31.21■■■□□ 2.59
CMTM7-202ENST00000349718 ADGBQ8N7X0 1667 aa31.21■■■□□ 2.59
CMTM7-202ENST00000349718 ESF1Q9H501 851 aaKnown RBP31.2■■■□□ 2.59
CMTM7-202ENST00000349718 A2MP01023 1474 aa31.17■■■□□ 2.58
CMTM7-202ENST00000349718 APLP2Q06481 763 aa31.16■■■□□ 2.58
CMTM7-202ENST00000349718 KANK4Q5T7N3 995 aaPredicted RBP31.16■■■□□ 2.58
CMTM7-202ENST00000349718 PLXNC1O60486 1568 aa31.16■■■□□ 2.58
CMTM7-202ENST00000349718 CCDC141Q6ZP82 1450 aa31.15■■■□□ 2.58
CMTM7-202ENST00000349718 PREX1Q8TCU6 1659 aa31.15■■■□□ 2.58
CMTM7-202ENST00000349718 C3P01024 1663 aa31.14■■■□□ 2.58
CMTM7-202ENST00000349718 CEBPAP49715 358 aaPredicted RBP31.14■■■□□ 2.58
CMTM7-202ENST00000349718 RSPH4AQ5TD94 716 aa31.14■■■□□ 2.58
CMTM7-202ENST00000349718 RTEL1-TNFRSF6BF6WH68 1400 aa31.14■■■□□ 2.58
CMTM7-202ENST00000349718 SETD1BQ9UPS6 1966 aaKnown RBP31.13■■■□□ 2.57
CMTM7-202ENST00000349718 CNTLNQ9NXG0 1405 aa31.12■■■□□ 2.57
CMTM7-202ENST00000349718 ARHGEF5Q12774 1597 aa31.1■■■□□ 2.57
CMTM7-202ENST00000349718 MROH2AA6NES4 1674 aa31.07■■■□□ 2.56
CMTM7-202ENST00000349718 MYOM3Q5VTT5 1437 aa31.06■■■□□ 2.56
CMTM7-202ENST00000349718 HSPA2P54652 639 aa31.05■■■□□ 2.56
CMTM7-202ENST00000349718 MIA2Q96PC5 1412 aa31.04■■■□□ 2.56
CMTM7-202ENST00000349718 CLTCQ00610 1675 aaKnown RBP31.03■■■□□ 2.56
CMTM7-202ENST00000349718 TSPY4P0CV99 314 aa31.02■■■□□ 2.56
CMTM7-202ENST00000349718 TSPY10P0CW01 314 aa31.02■■■□□ 2.56
CMTM7-202ENST00000349718 GGT6Q6P531 493 aa31■■■□□ 2.55
CMTM7-202ENST00000349718 DHX29Q7Z478 1369 aaKnown RBP31■■■□□ 2.55
CMTM7-202ENST00000349718 UHRF1BP1Q6BDS2 1440 aa30.99■■■□□ 2.55
CMTM7-202ENST00000349718 PPP6R1Q9UPN7 881 aa30.95■■■□□ 2.55
CMTM7-202ENST00000349718 MAST1Q9Y2H9 1570 aa30.95■■■□□ 2.54
CMTM7-202ENST00000349718 ZMYM3Q14202 1370 aa30.94■■■□□ 2.54
CMTM7-202ENST00000349718 PTPN23Q9H3S7 1636 aa30.9■■■□□ 2.54
CMTM7-202ENST00000349718 NPATQ14207 1427 aa30.9■■■□□ 2.54
CMTM7-202ENST00000349718 KIF3BO15066 747 aa30.89■■■□□ 2.54
CMTM7-202ENST00000349718 CROCC2H7BZ55 1655 aa30.84■■■□□ 2.53
CMTM7-202ENST00000349718 FAM135AQ9P2D6 1515 aa30.83■■■□□ 2.53
CMTM7-202ENST00000349718 FGD6Q6ZV73 1430 aa30.82■■■□□ 2.52
CMTM7-202ENST00000349718 STRCQ7RTU9 1775 aa30.82■■■□□ 2.52
CMTM7-202ENST00000349718 ILDR1Q86SU0 546 aaPredicted RBP30.81■■■□□ 2.52
CMTM7-202ENST00000349718 KDM5DQ9BY66 1539 aa30.8■■■□□ 2.52
CMTM7-202ENST00000349718 PTPRKQ15262 1439 aa30.8■■■□□ 2.52
CMTM7-202ENST00000349718 EIF2AK4Q9P2K8 1649 aaKnown RBP30.79■■■□□ 2.52
CMTM7-202ENST00000349718 TCOF1Q13428 1488 aaKnown RBP30.78■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms