RNA–Protein interactions for RNA: ENST00000348124.5

TRAF6-201, Transcript of TNF receptor associated factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF6, Length 2,558 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF6-201ENST00000348124 KIF7Q2M1P5 1343 aa20.76■□□□□ 0.91
TRAF6-201ENST00000348124 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
TRAF6-201ENST00000348124 ABCA10Q8WWZ4 1543 aa20.75■□□□□ 0.91
TRAF6-201ENST00000348124 FOXD1Q16676 465 aa20.74■□□□□ 0.91
TRAF6-201ENST00000348124 RNF123Q5XPI4 1314 aa20.74■□□□□ 0.91
TRAF6-201ENST00000348124 ANO8Q9HCE9 1232 aaPredicted RBP20.74■□□□□ 0.91
TRAF6-201ENST00000348124 SUPT6HQ7KZ85 1726 aaKnown RBP20.73■□□□□ 0.91
TRAF6-201ENST00000348124 CTTNBP2Q8WZ74 1663 aa20.73■□□□□ 0.91
TRAF6-201ENST00000348124 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
TRAF6-201ENST00000348124 LRRIQ1Q96JM4 1722 aa20.71■□□□□ 0.91
TRAF6-201ENST00000348124 KDM6BO15054 1643 aa20.7■□□□□ 0.9
TRAF6-201ENST00000348124 EHBP1L1Q8N3D4 1523 aa20.7■□□□□ 0.9
TRAF6-201ENST00000348124 CNGB1Q14028 1251 aaPredicted RBP20.7■□□□□ 0.9
TRAF6-201ENST00000348124 GCC2Q8IWJ2 1684 aa20.7■□□□□ 0.9
TRAF6-201ENST00000348124 GRIN2BQ13224 1484 aa20.69■□□□□ 0.9
TRAF6-201ENST00000348124 UGGT2Q9NYU1 1516 aa20.68■□□□□ 0.9
TRAF6-201ENST00000348124 CUL7Q14999 1698 aa20.67■□□□□ 0.9
TRAF6-201ENST00000348124 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
TRAF6-201ENST00000348124 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
TRAF6-201ENST00000348124 TCOF1Q13428 1488 aaKnown RBP20.65■□□□□ 0.9
TRAF6-201ENST00000348124 ABCA5Q8WWZ7 1642 aa20.64■□□□□ 0.9
TRAF6-201ENST00000348124 IL27Q8NEV9 243 aa20.64■□□□□ 0.9
TRAF6-201ENST00000348124 ARHGEF11O15085 1522 aa20.64■□□□□ 0.89
TRAF6-201ENST00000348124 SALL2Q9Y467 1007 aaPredicted RBP20.63■□□□□ 0.89
TRAF6-201ENST00000348124 SAMD9Q5K651 1589 aa20.62■□□□□ 0.89
TRAF6-201ENST00000348124 THOC2Q8NI27 1593 aaKnown RBP20.62■□□□□ 0.89
TRAF6-201ENST00000348124 GAPVD1Q14C86 1478 aa20.62■□□□□ 0.89
TRAF6-201ENST00000348124 DHX29Q7Z478 1369 aaKnown RBP20.62■□□□□ 0.89
TRAF6-201ENST00000348124 ANKRD30BQ9BXX2 1392 aa20.62■□□□□ 0.89
TRAF6-201ENST00000348124 NPM2Q86SE8 214 aaKnown RBP20.62■□□□□ 0.89
TRAF6-201ENST00000348124 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
TRAF6-201ENST00000348124 TEX14Q8IWB6 1497 aa20.61■□□□□ 0.89
TRAF6-201ENST00000348124 MAGI3Q5TCQ9 1506 aa20.61■□□□□ 0.89
TRAF6-201ENST00000348124 WDR62O43379 1518 aa20.61■□□□□ 0.89
TRAF6-201ENST00000348124 POLR3GLQ9BT43 218 aa20.59■□□□□ 0.89
TRAF6-201ENST00000348124 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
TRAF6-201ENST00000348124 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
TRAF6-201ENST00000348124 ZNF608Q9ULD9 1512 aaPredicted RBP20.57■□□□□ 0.88
TRAF6-201ENST00000348124 RTN4Q9NQC3 1192 aaKnown RBP20.56■□□□□ 0.88
TRAF6-201ENST00000348124 LAS1LQ9Y4W2 734 aaKnown RBP20.56■□□□□ 0.88
TRAF6-201ENST00000348124 NEFMP07197 916 aa20.55■□□□□ 0.88
TRAF6-201ENST00000348124 PNISRQ8TF01 805 aaKnown RBP20.54■□□□□ 0.88
TRAF6-201ENST00000348124 MIA2Q96PC5 1412 aa20.53■□□□□ 0.88
TRAF6-201ENST00000348124 TCERG1O14776 1098 aaKnown RBP20.52■□□□□ 0.88
TRAF6-201ENST00000348124 IFT140Q96RY7 1462 aa20.52■□□□□ 0.88
TRAF6-201ENST00000348124 TMC1Q8TDI8 760 aa20.52■□□□□ 0.88
TRAF6-201ENST00000348124 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
TRAF6-201ENST00000348124 PDE4AP27815 886 aa20.5■□□□□ 0.87
TRAF6-201ENST00000348124 USP35Q9P2H5 1018 aa20.5■□□□□ 0.87
TRAF6-201ENST00000348124 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
TRAF6-201ENST00000348124 RRP1P56182 461 aaKnown RBP20.49■□□□□ 0.87
TRAF6-201ENST00000348124 USP47Q96K76 1375 aa20.48■□□□□ 0.87
TRAF6-201ENST00000348124 ZNF326Q5BKZ1 582 aaKnown RBP20.46■□□□□ 0.87
TRAF6-201ENST00000348124 BACH2Q9BYV9 841 aa20.46■□□□□ 0.87
TRAF6-201ENST00000348124 BCORL1Q5H9F3 1711 aa20.45■□□□□ 0.86
TRAF6-201ENST00000348124 ROCK1Q13464 1354 aa20.44■□□□□ 0.86
TRAF6-201ENST00000348124 PPM1GO15355 546 aaPredicted RBP20.43■□□□□ 0.86
TRAF6-201ENST00000348124 WASHC2CQ9Y4E1 1318 aa20.43■□□□□ 0.86
TRAF6-201ENST00000348124 DAPK1P53355 1430 aa20.42■□□□□ 0.86
TRAF6-201ENST00000348124 ARID3CA6NKF2 412 aa20.42■□□□□ 0.86
TRAF6-201ENST00000348124 MS4A1P11836 297 aa20.42■□□□□ 0.86
TRAF6-201ENST00000348124 RCAN3Q9UKA8 241 aa20.42■□□□□ 0.86
TRAF6-201ENST00000348124 EPRSP07814 1512 aaKnown RBP20.42■□□□□ 0.86
TRAF6-201ENST00000348124 ARID4BQ4LE39 1312 aaPredicted RBP20.42■□□□□ 0.86
TRAF6-201ENST00000348124 LRPPRCP42704 1394 aaKnown RBP20.41■□□□□ 0.86
TRAF6-201ENST00000348124 FBLN2P98095 1184 aa20.41■□□□□ 0.86
TRAF6-201ENST00000348124 CDK13Q14004 1512 aaKnown RBP20.39■□□□□ 0.86
TRAF6-201ENST00000348124 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.39■□□□□ 0.85
TRAF6-201ENST00000348124 MBD5Q9P267 1494 aa20.39■□□□□ 0.85
TRAF6-201ENST00000348124 ABCC5O15440 1437 aa20.38■□□□□ 0.85
TRAF6-201ENST00000348124 ROCK2O75116 1388 aaKnown RBP20.38■□□□□ 0.85
TRAF6-201ENST00000348124 KIF15Q9NS87 1388 aa20.37■□□□□ 0.85
TRAF6-201ENST00000348124 BRD4O60885 1362 aaPredicted RBP20.36■□□□□ 0.85
TRAF6-201ENST00000348124 MYBBP1AQ9BQG0 1328 aaKnown RBP20.35■□□□□ 0.85
TRAF6-201ENST00000348124 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
TRAF6-201ENST00000348124 KDM5CP41229 1560 aa20.34■□□□□ 0.85
TRAF6-201ENST00000348124 PZPP20742 1482 aa20.34■□□□□ 0.85
TRAF6-201ENST00000348124 EIF4G3O43432 1585 aaKnown RBP20.34■□□□□ 0.85
TRAF6-201ENST00000348124 PBRM1Q86U86 1689 aa20.34■□□□□ 0.85
TRAF6-201ENST00000348124 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
TRAF6-201ENST00000348124 DDRGK1Q96HY6 314 aa20.32■□□□□ 0.84
TRAF6-201ENST00000348124 DNMT1P26358 1616 aaKnown RBP20.32■□□□□ 0.84
TRAF6-201ENST00000348124 RALBP1Q15311 655 aa20.32■□□□□ 0.84
TRAF6-201ENST00000348124 BRPF3Q9ULD4 1205 aa20.32■□□□□ 0.84
TRAF6-201ENST00000348124 KIF14Q15058 1648 aa20.31■□□□□ 0.84
TRAF6-201ENST00000348124 GSE1Q14687 1217 aa20.3■□□□□ 0.84
TRAF6-201ENST00000348124 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
TRAF6-201ENST00000348124 SKAP1Q86WV1 359 aa20.29■□□□□ 0.84
TRAF6-201ENST00000348124 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
TRAF6-201ENST00000348124 KIAA1107Q9UPP5 1409 aa20.29■□□□□ 0.84
TRAF6-201ENST00000348124 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
TRAF6-201ENST00000348124 ADAMTS12P58397 1594 aa20.27■□□□□ 0.84
TRAF6-201ENST00000348124 PKD2Q13563 968 aa20.27■□□□□ 0.83
TRAF6-201ENST00000348124 PLIN1O60240 522 aa20.26■□□□□ 0.83
TRAF6-201ENST00000348124 NFKBIBQ15653 356 aa20.26■□□□□ 0.83
TRAF6-201ENST00000348124 CDCA7LQ96GN5 454 aa20.26■□□□□ 0.83
TRAF6-201ENST00000348124 ST20-MTHFSA0A0A6YYL1 179 aa20.24■□□□□ 0.83
TRAF6-201ENST00000348124 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
TRAF6-201ENST00000348124 CRBNQ96SW2 442 aa20.23■□□□□ 0.83
TRAF6-201ENST00000348124 SLC4A3P48751 1232 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms