RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
SEC24C-202ENST00000345254 NUP155O75694 1391 aa12.88□□□□□ -0.35
SEC24C-202ENST00000345254 ANKRD30AQ9BXX3 1397 aa12.88□□□□□ -0.35
SEC24C-202ENST00000345254 DDX10Q13206 875 aaKnown RBP12.88□□□□□ -0.35
SEC24C-202ENST00000345254 RTL5Q5HYW3 569 aaPredicted RBP12.88□□□□□ -0.35
SEC24C-202ENST00000345254 KIF21AQ7Z4S6 1674 aa12.87□□□□□ -0.35
SEC24C-202ENST00000345254 ZNF644Q9H582 1327 aaPredicted RBP12.87□□□□□ -0.35
SEC24C-202ENST00000345254 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
SEC24C-202ENST00000345254 SCAPERQ9BY12 1400 aa12.87□□□□□ -0.35
SEC24C-202ENST00000345254 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
SEC24C-202ENST00000345254 PKD2Q13563 968 aa12.86□□□□□ -0.35
SEC24C-202ENST00000345254 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
SEC24C-202ENST00000345254 HSPA2P54652 639 aa12.84□□□□□ -0.35
SEC24C-202ENST00000345254 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.35
SEC24C-202ENST00000345254 TXNDC2Q86VQ3 553 aa12.83□□□□□ -0.35
SEC24C-202ENST00000345254 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
SEC24C-202ENST00000345254 FOXD1Q16676 465 aa12.83□□□□□ -0.36
SEC24C-202ENST00000345254 DCAF11Q8TEB1 546 aa12.83□□□□□ -0.36
SEC24C-202ENST00000345254 TIMELESSQ9UNS1 1208 aa12.82□□□□□ -0.36
SEC24C-202ENST00000345254 THEMISQ8N1K5 641 aaPredicted RBP12.82□□□□□ -0.36
SEC24C-202ENST00000345254 PROSER2Q86WR7 435 aaPredicted RBP12.82□□□□□ -0.36
SEC24C-202ENST00000345254 ATF3P18847 181 aa12.81□□□□□ -0.36
SEC24C-202ENST00000345254 WDR62O43379 1518 aa12.81□□□□□ -0.36
SEC24C-202ENST00000345254 ARHGAP5Q13017 1502 aa12.81□□□□□ -0.36
SEC24C-202ENST00000345254 ARXQ96QS3 562 aa12.8□□□□□ -0.36
SEC24C-202ENST00000345254 ANKLE2Q86XL3 938 aa12.8□□□□□ -0.36
SEC24C-202ENST00000345254 DAXXQ9UER7 740 aaPredicted RBP12.8□□□□□ -0.36
SEC24C-202ENST00000345254 PLB1Q6P1J6 1458 aa12.79□□□□□ -0.36
SEC24C-202ENST00000345254 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
SEC24C-202ENST00000345254 TOP2BQ02880 1626 aa12.79□□□□□ -0.36
SEC24C-202ENST00000345254 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
SEC24C-202ENST00000345254 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.36
SEC24C-202ENST00000345254 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.37
SEC24C-202ENST00000345254 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
SEC24C-202ENST00000345254 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
SEC24C-202ENST00000345254 NUTM2BA6NNL0 878 aaPredicted RBP12.74□□□□□ -0.37
SEC24C-202ENST00000345254 NUTM2EB1AL46 878 aaPredicted RBP12.74□□□□□ -0.37
SEC24C-202ENST00000345254 NUTM2AQ8IVF1 878 aaPredicted RBP12.74□□□□□ -0.37
SEC24C-202ENST00000345254 SLC26A8Q96RN1 970 aa12.74□□□□□ -0.37
SEC24C-202ENST00000345254 ERICH3Q5RHP9 1530 aa12.73□□□□□ -0.37
SEC24C-202ENST00000345254 CARD11Q9BXL7 1154 aa12.73□□□□□ -0.37
SEC24C-202ENST00000345254 CCER2I3L3R5 266 aa12.73□□□□□ -0.37
SEC24C-202ENST00000345254 BCL11AQ9H165 835 aa12.73□□□□□ -0.37
SEC24C-202ENST00000345254 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
SEC24C-202ENST00000345254 IQGAP2Q13576 1575 aa12.72□□□□□ -0.37
SEC24C-202ENST00000345254 ANP32AP39687 249 aaKnown RBP12.72□□□□□ -0.37
SEC24C-202ENST00000345254 VGFO15240 615 aaPredicted RBP12.7□□□□□ -0.38
SEC24C-202ENST00000345254 ARHGEF11O15085 1522 aa12.7□□□□□ -0.38
SEC24C-202ENST00000345254 TEX14Q8IWB6 1497 aa12.69□□□□□ -0.38
SEC24C-202ENST00000345254 NPHP1O15259 732 aa12.69□□□□□ -0.38
SEC24C-202ENST00000345254 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEC24C-202ENST00000345254 HIRIP3Q9BW71 556 aaPredicted RBP12.69□□□□□ -0.38
SEC24C-202ENST00000345254 DHX57Q6P158 1386 aaKnown RBP12.68□□□□□ -0.38
SEC24C-202ENST00000345254 TRAK1Q9UPV9 953 aa12.68□□□□□ -0.38
SEC24C-202ENST00000345254 DENND4BO75064 1496 aaPredicted RBP12.67□□□□□ -0.38
SEC24C-202ENST00000345254 TNNT2P45379 298 aaPredicted RBP12.67□□□□□ -0.38
SEC24C-202ENST00000345254 KIF15Q9NS87 1388 aa12.67□□□□□ -0.38
SEC24C-202ENST00000345254 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
SEC24C-202ENST00000345254 SETD5Q9C0A6 1442 aa12.66□□□□□ -0.38
SEC24C-202ENST00000345254 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
SEC24C-202ENST00000345254 EVA1CP58658 441 aa12.66□□□□□ -0.38
SEC24C-202ENST00000345254 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
SEC24C-202ENST00000345254 ADGRL1O94910 1474 aa12.65□□□□□ -0.38
SEC24C-202ENST00000345254 RBM33Q96EV2 1170 aaKnown RBP12.65□□□□□ -0.38
SEC24C-202ENST00000345254 TSHZ2Q9NRE2 1034 aa12.65□□□□□ -0.38
SEC24C-202ENST00000345254 SIN3AQ96ST3 1273 aa12.65□□□□□ -0.38
SEC24C-202ENST00000345254 MPHOSPH9Q99550 1183 aa12.65□□□□□ -0.38
SEC24C-202ENST00000345254 PSME1Q06323 249 aa12.64□□□□□ -0.39
SEC24C-202ENST00000345254 EIF4G2P78344 907 aaKnown RBP eCLIP12.63□□□□□ -0.39
SEC24C-202ENST00000345254 TOM1O60784 492 aa12.63□□□□□ -0.39
SEC24C-202ENST00000345254 FBXO31Q5XUX0 539 aaPredicted RBP12.63□□□□□ -0.39
SEC24C-202ENST00000345254 ERICH6BQ5W0A0 696 aa12.63□□□□□ -0.39
SEC24C-202ENST00000345254 KIF21BO75037 1637 aa12.62□□□□□ -0.39
SEC24C-202ENST00000345254 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
SEC24C-202ENST00000345254 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
SEC24C-202ENST00000345254 MYOM3Q5VTT5 1437 aa12.6□□□□□ -0.39
SEC24C-202ENST00000345254 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
SEC24C-202ENST00000345254 FANCAO15360 1455 aa12.6□□□□□ -0.39
SEC24C-202ENST00000345254 MRS2Q9HD23 443 aa12.59□□□□□ -0.39
SEC24C-202ENST00000345254 MINK1Q8N4C8 1332 aaPredicted RBP12.59□□□□□ -0.39
SEC24C-202ENST00000345254 CDK13Q14004 1512 aaKnown RBP12.59□□□□□ -0.39
SEC24C-202ENST00000345254 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
SEC24C-202ENST00000345254 FAM9BQ8IZU0 186 aa12.59□□□□□ -0.39
SEC24C-202ENST00000345254 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
SEC24C-202ENST00000345254 LTV1Q96GA3 475 aaPredicted RBP12.58□□□□□ -0.4
SEC24C-202ENST00000345254 USP35Q9P2H5 1018 aa12.58□□□□□ -0.4
SEC24C-202ENST00000345254 PPP4R2Q9NY27 417 aa12.58□□□□□ -0.4
SEC24C-202ENST00000345254 HDGFL2Q7Z4V5 671 aaPredicted RBP12.58□□□□□ -0.4
SEC24C-202ENST00000345254 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
SEC24C-202ENST00000345254 CASKIN1Q8WXD9 1431 aa12.57□□□□□ -0.4
SEC24C-202ENST00000345254 CCDC136Q96JN2 1154 aa12.56□□□□□ -0.4
SEC24C-202ENST00000345254 SALL2Q9Y467 1007 aaPredicted RBP12.56□□□□□ -0.4
SEC24C-202ENST00000345254 MSH5O43196 834 aa12.56□□□□□ -0.4
SEC24C-202ENST00000345254 KNSTRNQ9Y448 316 aa12.56□□□□□ -0.4
SEC24C-202ENST00000345254 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
SEC24C-202ENST00000345254 WDR7Q9Y4E6 1490 aa12.55□□□□□ -0.4
SEC24C-202ENST00000345254 NUP160Q12769 1436 aa12.55□□□□□ -0.4
SEC24C-202ENST00000345254 CUL7Q14999 1698 aa12.55□□□□□ -0.4
SEC24C-202ENST00000345254 SLC52A1Q9NWF4 448 aa12.55□□□□□ -0.4
SEC24C-202ENST00000345254 ZBTB47Q9UFB7 747 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms