RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 ZFYVE16Q7Z3T8 1539 aa28.99■■■□□ 2.23
USF2-202ENST00000343550 POGZQ7Z3K3 1410 aa28.99■■■□□ 2.23
USF2-202ENST00000343550 KIF14Q15058 1648 aa28.98■■■□□ 2.23
USF2-202ENST00000343550 MADDQ8WXG6 1647 aa28.97■■■□□ 2.23
USF2-202ENST00000343550 MYO5CQ9NQX4 1742 aa28.95■■■□□ 2.23
USF2-202ENST00000343550 CASKIN1Q8WXD9 1431 aa28.94■■■□□ 2.22
USF2-202ENST00000343550 ILDR1Q86SU0 546 aaPredicted RBP28.94■■■□□ 2.22
USF2-202ENST00000343550 LRRIQ1Q96JM4 1722 aa28.93■■■□□ 2.22
USF2-202ENST00000343550 CEP162Q5TB80 1403 aa28.91■■■□□ 2.22
USF2-202ENST00000343550 ARHGAP5Q13017 1502 aa28.89■■■□□ 2.22
USF2-202ENST00000343550 PCF11O94913 1555 aaKnown RBP28.89■■■□□ 2.21
USF2-202ENST00000343550 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.21
USF2-202ENST00000343550 SIGLEC1Q9BZZ2 1709 aa28.86■■■□□ 2.21
USF2-202ENST00000343550 MLECQ14165 292 aa28.85■■■□□ 2.21
USF2-202ENST00000343550 AFAP1Q8N556 730 aa28.85■■■□□ 2.21
USF2-202ENST00000343550 ATP10AO60312 1499 aa28.85■■■□□ 2.21
USF2-202ENST00000343550 RIMS1Q86UR5 1692 aaKnown RBP28.85■■■□□ 2.21
USF2-202ENST00000343550 ZNF518AQ6AHZ1 1483 aa28.84■■■□□ 2.21
USF2-202ENST00000343550 C9orf84Q5VXU9 1444 aa28.81■■■□□ 2.2
USF2-202ENST00000343550 FYCO1Q9BQS8 1478 aa28.81■■■□□ 2.2
USF2-202ENST00000343550 PLPPR3Q6T4P5 718 aa28.8■■■□□ 2.2
USF2-202ENST00000343550 LMTK3Q96Q04 1460 aa28.78■■■□□ 2.2
USF2-202ENST00000343550 MYT1LQ9UL68 1186 aa28.78■■■□□ 2.2
USF2-202ENST00000343550 CDC42BPBQ9Y5S2 1711 aa28.77■■■□□ 2.2
USF2-202ENST00000343550 KDM5CP41229 1560 aa28.76■■■□□ 2.2
USF2-202ENST00000343550 PREX2Q70Z35 1606 aa28.73■■■□□ 2.19
USF2-202ENST00000343550 ARHGEF12Q9NZN5 1544 aa28.71■■■□□ 2.19
USF2-202ENST00000343550 TRAPPC8Q9Y2L5 1435 aa28.7■■■□□ 2.19
USF2-202ENST00000343550 MLH3Q9UHC1 1453 aa28.69■■■□□ 2.18
USF2-202ENST00000343550 FER1L4A9Z1Z3 1794 aa28.69■■■□□ 2.18
USF2-202ENST00000343550 ABCC1P33527 1531 aa28.69■■■□□ 2.18
USF2-202ENST00000343550 HSPA2P54652 639 aa28.67■■■□□ 2.18
USF2-202ENST00000343550 ZNF777Q9ULD5 760 aaPredicted RBP28.65■■■□□ 2.18
USF2-202ENST00000343550 DIP2CQ9Y2E4 1556 aa28.65■■■□□ 2.18
USF2-202ENST00000343550 CDC42BPAQ5VT25 1732 aa28.64■■■□□ 2.18
USF2-202ENST00000343550 CEBPAP49715 358 aaPredicted RBP28.62■■■□□ 2.17
USF2-202ENST00000343550 GPATCH8Q9UKJ3 1502 aaKnown RBP28.62■■■□□ 2.17
USF2-202ENST00000343550 REREQ9P2R6 1566 aa28.61■■■□□ 2.17
USF2-202ENST00000343550 ITSN2Q9NZM3 1697 aa28.61■■■□□ 2.17
USF2-202ENST00000343550 ABCA6Q8N139 1617 aa28.6■■■□□ 2.17
USF2-202ENST00000343550 MTUS2Q5JR59 1369 aa28.57■■■□□ 2.16
USF2-202ENST00000343550 VPS8Q8N3P4 1428 aa28.57■■■□□ 2.16
USF2-202ENST00000343550 CFDP1Q9UEE9 299 aaPredicted RBP28.57■■■□□ 2.16
USF2-202ENST00000343550 HNRNPMP52272 730 aaKnown RBP eCLIP28.56■■■□□ 2.168e-10■■■■□ 23.4
USF2-202ENST00000343550 SAMD9LQ8IVG5 1584 aa28.55■■■□□ 2.16
USF2-202ENST00000343550 CCNB3Q8WWL7 1395 aa28.55■■■□□ 2.16
USF2-202ENST00000343550 AGLP35573 1532 aa28.54■■■□□ 2.16
USF2-202ENST00000343550 FBXO41Q8TF61 875 aa28.53■■■□□ 2.16
USF2-202ENST00000343550 KIDINS220Q9ULH0 1771 aa28.53■■■□□ 2.16
USF2-202ENST00000343550 SYCP2Q9BX26 1530 aa28.51■■■□□ 2.15
USF2-202ENST00000343550 SPAG9O60271 1321 aaKnown RBP28.51■■■□□ 2.15
USF2-202ENST00000343550 ESF1Q9H501 851 aaKnown RBP28.5■■■□□ 2.15
USF2-202ENST00000343550 KIAA1107Q9UPP5 1409 aa28.5■■■□□ 2.15
USF2-202ENST00000343550 PLEKHH2Q8IVE3 1493 aa28.48■■■□□ 2.15
USF2-202ENST00000343550 PREX1Q8TCU6 1659 aa28.45■■■□□ 2.15
USF2-202ENST00000343550 UHRF1BP1Q6BDS2 1440 aa28.42■■■□□ 2.14
USF2-202ENST00000343550 EHBP1L1Q8N3D4 1523 aa28.41■■■□□ 2.14
USF2-202ENST00000343550 ZNF644Q9H582 1327 aaPredicted RBP28.4■■■□□ 2.14
USF2-202ENST00000343550 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
USF2-202ENST00000343550 SETD1BQ9UPS6 1966 aaKnown RBP28.39■■■□□ 2.14
USF2-202ENST00000343550 ATP7AQ04656 1500 aa28.39■■■□□ 2.13
USF2-202ENST00000343550 TIAM1Q13009 1591 aa28.38■■■□□ 2.13
USF2-202ENST00000343550 C3P01024 1663 aa28.38■■■□□ 2.13
USF2-202ENST00000343550 INO80Q9ULG1 1556 aaPredicted RBP28.35■■■□□ 2.13
USF2-202ENST00000343550 A2MP01023 1474 aa28.34■■■□□ 2.13
USF2-202ENST00000343550 DMRT2Q9Y5R5 561 aa28.33■■■□□ 2.13
USF2-202ENST00000343550 MAP3K1Q13233 1512 aa28.32■■■□□ 2.12
USF2-202ENST00000343550 MBD5Q9P267 1494 aa28.32■■■□□ 2.12
USF2-202ENST00000343550 SUPT6HQ7KZ85 1726 aaKnown RBP28.32■■■□□ 2.12
USF2-202ENST00000343550 ZMYM3Q14202 1370 aa28.3■■■□□ 2.12
USF2-202ENST00000343550 KANK4Q5T7N3 995 aaPredicted RBP28.3■■■□□ 2.12
USF2-202ENST00000343550 CERKQ8TCT0 537 aa28.3■■■□□ 2.12
USF2-202ENST00000343550 PLXNC1O60486 1568 aa28.3■■■□□ 2.12
USF2-202ENST00000343550 LRRC9Q6ZRR7 1453 aa28.29■■■□□ 2.12
USF2-202ENST00000343550 APLP2Q06481 763 aa28.28■■■□□ 2.12
USF2-202ENST00000343550 GGT6Q6P531 493 aa28.28■■■□□ 2.12
USF2-202ENST00000343550 NCOA2Q15596 1464 aa28.27■■■□□ 2.12
USF2-202ENST00000343550 STRCQ7RTU9 1775 aa28.27■■■□□ 2.12
USF2-202ENST00000343550 RTEL1-TNFRSF6BF6WH68 1400 aa28.25■■■□□ 2.11
USF2-202ENST00000343550 NPATQ14207 1427 aa28.25■■■□□ 2.11
USF2-202ENST00000343550 MROH2AA6NES4 1674 aa28.24■■■□□ 2.11
USF2-202ENST00000343550 PPP6R1Q9UPN7 881 aa28.23■■■□□ 2.11
USF2-202ENST00000343550 ADGBQ8N7X0 1667 aa28.21■■■□□ 2.11
USF2-202ENST00000343550 RSPH4AQ5TD94 716 aa28.21■■■□□ 2.11
USF2-202ENST00000343550 DHX29Q7Z478 1369 aaKnown RBP28.19■■■□□ 2.1
USF2-202ENST00000343550 CLTCQ00610 1675 aaKnown RBP28.18■■■□□ 2.1
USF2-202ENST00000343550 CAMSAP2Q08AD1 1489 aa28.18■■■□□ 2.1
USF2-202ENST00000343550 PTPRTO14522 1441 aa28.17■■■□□ 2.1
USF2-202ENST00000343550 CCDC141Q6ZP82 1450 aa28.17■■■□□ 2.1
USF2-202ENST00000343550 NCOA1Q15788 1441 aa28.14■■■□□ 2.1
USF2-202ENST00000343550 PTPRKQ15262 1439 aa28.13■■■□□ 2.09
USF2-202ENST00000343550 KIF3BO15066 747 aa28.12■■■□□ 2.09
USF2-202ENST00000343550 TSPY4P0CV99 314 aa28.1■■■□□ 2.09
USF2-202ENST00000343550 TSPY10P0CW01 314 aa28.1■■■□□ 2.09
USF2-202ENST00000343550 CAMSAP1Q5T5Y3 1602 aa28.08■■■□□ 2.09
USF2-202ENST00000343550 ARHGEF5Q12774 1597 aa28.06■■■□□ 2.08
USF2-202ENST00000343550 NCKAP5LQ9HCH0 1330 aa28.05■■■□□ 2.08
USF2-202ENST00000343550 MYO3AQ8NEV4 1616 aa28.02■■■□□ 2.08
USF2-202ENST00000343550 WASHC2CQ9Y4E1 1318 aa28.01■■■□□ 2.07
USF2-202ENST00000343550 MYOM3Q5VTT5 1437 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms