RNA–Protein interactions for RNA: ENST00000343420.6

CD55-202, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-202ENST00000343420 POGZQ7Z3K3 1410 aa27.26■■□□□ 1.95
CD55-202ENST00000343420 MAGI2Q86UL8 1455 aa27.25■■□□□ 1.95
CD55-202ENST00000343420 CDC42BPBQ9Y5S2 1711 aa27.25■■□□□ 1.95
CD55-202ENST00000343420 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
CD55-202ENST00000343420 ZFYVE16Q7Z3T8 1539 aa27.23■■□□□ 1.95
CD55-202ENST00000343420 ADAMTSL3P82987 1691 aa27.23■■□□□ 1.95
CD55-202ENST00000343420 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
CD55-202ENST00000343420 BCORL1Q5H9F3 1711 aa27.21■■□□□ 1.95
CD55-202ENST00000343420 ARID4BQ4LE39 1312 aaPredicted RBP27.21■■□□□ 1.95
CD55-202ENST00000343420 YEATS2Q9ULM3 1422 aa27.18■■□□□ 1.94
CD55-202ENST00000343420 CDC42BPAQ5VT25 1732 aa27.18■■□□□ 1.94
CD55-202ENST00000343420 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
CD55-202ENST00000343420 KDM5CP41229 1560 aa27.12■■□□□ 1.93
CD55-202ENST00000343420 LOC105371045A0A1W2PR82 267 aa27.11■■□□□ 1.93
CD55-202ENST00000343420 MADDQ8WXG6 1647 aa27.11■■□□□ 1.93
CD55-202ENST00000343420 PTPRMP28827 1452 aa27.11■■□□□ 1.93
CD55-202ENST00000343420 ABCC1P33527 1531 aa27.11■■□□□ 1.93
CD55-202ENST00000343420 SIGLEC1Q9BZZ2 1709 aa27.1■■□□□ 1.93
CD55-202ENST00000343420 AFAP1Q8N556 730 aa27.1■■□□□ 1.93
CD55-202ENST00000343420 ATP10AO60312 1499 aa27.09■■□□□ 1.93
CD55-202ENST00000343420 MTUS2Q5JR59 1369 aa27.09■■□□□ 1.93
CD55-202ENST00000343420 ITSN2Q9NZM3 1697 aa27.08■■□□□ 1.93
CD55-202ENST00000343420 HECW2Q9P2P5 1572 aa27.08■■□□□ 1.93
CD55-202ENST00000343420 GPATCH8Q9UKJ3 1502 aaKnown RBP27.07■■□□□ 1.92
CD55-202ENST00000343420 C9orf84Q5VXU9 1444 aa27.06■■□□□ 1.92
CD55-202ENST00000343420 ARHGEF12Q9NZN5 1544 aa27.06■■□□□ 1.92
CD55-202ENST00000343420 RIMS1Q86UR5 1692 aaKnown RBP27.04■■□□□ 1.92
CD55-202ENST00000343420 TRAPPC8Q9Y2L5 1435 aa27.03■■□□□ 1.92
CD55-202ENST00000343420 EHBP1L1Q8N3D4 1523 aa27.02■■□□□ 1.92
CD55-202ENST00000343420 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
CD55-202ENST00000343420 MYT1LQ9UL68 1186 aa27.02■■□□□ 1.92
CD55-202ENST00000343420 SAMD9LQ8IVG5 1584 aa27.01■■□□□ 1.92
CD55-202ENST00000343420 CCNB3Q8WWL7 1395 aa27.01■■□□□ 1.91
CD55-202ENST00000343420 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.91
CD55-202ENST00000343420 DIP2CQ9Y2E4 1556 aa26.99■■□□□ 1.91
CD55-202ENST00000343420 CFDP1Q9UEE9 299 aaPredicted RBP26.98■■□□□ 1.91
CD55-202ENST00000343420 MLECQ14165 292 aa26.97■■□□□ 1.91
CD55-202ENST00000343420 FER1L4A9Z1Z3 1794 aa26.97■■□□□ 1.91
CD55-202ENST00000343420 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
CD55-202ENST00000343420 SYCP2Q9BX26 1530 aa26.95■■□□□ 1.91
CD55-202ENST00000343420 VPS8Q8N3P4 1428 aa26.95■■□□□ 1.9
CD55-202ENST00000343420 REREQ9P2R6 1566 aa26.95■■□□□ 1.9
CD55-202ENST00000343420 PLEKHH2Q8IVE3 1493 aa26.94■■□□□ 1.9
CD55-202ENST00000343420 TIAM1Q13009 1591 aa26.94■■□□□ 1.9
CD55-202ENST00000343420 KIDINS220Q9ULH0 1771 aa26.94■■□□□ 1.9
CD55-202ENST00000343420 KIAA1107Q9UPP5 1409 aa26.93■■□□□ 1.9
CD55-202ENST00000343420 HNRNPMP52272 730 aaKnown RBP eCLIP26.91■■□□□ 1.9
CD55-202ENST00000343420 SUPT6HQ7KZ85 1726 aaKnown RBP26.89■■□□□ 1.9
CD55-202ENST00000343420 SPAG9O60271 1321 aaKnown RBP26.86■■□□□ 1.89
CD55-202ENST00000343420 AGLP35573 1532 aa26.85■■□□□ 1.89
CD55-202ENST00000343420 NCOA2Q15596 1464 aa26.85■■□□□ 1.89
CD55-202ENST00000343420 PLPPR3Q6T4P5 718 aa26.83■■□□□ 1.89
CD55-202ENST00000343420 ATP7AQ04656 1500 aa26.81■■□□□ 1.88
CD55-202ENST00000343420 ZNF644Q9H582 1327 aaPredicted RBP26.81■■□□□ 1.88
CD55-202ENST00000343420 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
CD55-202ENST00000343420 INO80Q9ULG1 1556 aaPredicted RBP26.8■■□□□ 1.88
CD55-202ENST00000343420 LMTK3Q96Q04 1460 aa26.8■■□□□ 1.88
CD55-202ENST00000343420 MAP3K1Q13233 1512 aa26.8■■□□□ 1.88
CD55-202ENST00000343420 MBD5Q9P267 1494 aa26.78■■□□□ 1.88
CD55-202ENST00000343420 CAMSAP2Q08AD1 1489 aa26.72■■□□□ 1.87
CD55-202ENST00000343420 SETD1BQ9UPS6 1966 aaKnown RBP26.71■■□□□ 1.87
CD55-202ENST00000343420 CEBPAP49715 358 aaPredicted RBP26.71■■□□□ 1.87
CD55-202ENST00000343420 ESF1Q9H501 851 aaKnown RBP26.71■■□□□ 1.87
CD55-202ENST00000343420 PLXNC1O60486 1568 aa26.71■■□□□ 1.87
CD55-202ENST00000343420 ADGBQ8N7X0 1667 aa26.7■■□□□ 1.87
CD55-202ENST00000343420 A2MP01023 1474 aa26.7■■□□□ 1.87
CD55-202ENST00000343420 KANK4Q5T7N3 995 aaPredicted RBP26.7■■□□□ 1.86
CD55-202ENST00000343420 RTEL1-TNFRSF6BF6WH68 1400 aa26.69■■□□□ 1.86
CD55-202ENST00000343420 RSPH4AQ5TD94 716 aa26.68■■□□□ 1.86
CD55-202ENST00000343420 PREX1Q8TCU6 1659 aa26.68■■□□□ 1.86
CD55-202ENST00000343420 C3P01024 1663 aa26.67■■□□□ 1.86
CD55-202ENST00000343420 CCDC141Q6ZP82 1450 aa26.67■■□□□ 1.86
CD55-202ENST00000343420 CNTLNQ9NXG0 1405 aa26.66■■□□□ 1.86
CD55-202ENST00000343420 ARHGEF5Q12774 1597 aa26.63■■□□□ 1.85
CD55-202ENST00000343420 HSPA2P54652 639 aa26.63■■□□□ 1.85
CD55-202ENST00000343420 APLP2Q06481 763 aa26.63■■□□□ 1.85
CD55-202ENST00000343420 MROH2AA6NES4 1674 aa26.61■■□□□ 1.85
CD55-202ENST00000343420 MYOM3Q5VTT5 1437 aa26.59■■□□□ 1.85
CD55-202ENST00000343420 MIA2Q96PC5 1412 aa26.58■■□□□ 1.85
CD55-202ENST00000343420 DHX29Q7Z478 1369 aaKnown RBP26.58■■□□□ 1.84
CD55-202ENST00000343420 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
CD55-202ENST00000343420 TSPY4P0CV99 314 aa26.56■■□□□ 1.84
CD55-202ENST00000343420 TSPY10P0CW01 314 aa26.56■■□□□ 1.84
CD55-202ENST00000343420 GGT6Q6P531 493 aa26.56■■□□□ 1.84
CD55-202ENST00000343420 CLTCQ00610 1675 aaKnown RBP26.56■■□□□ 1.84
CD55-202ENST00000343420 PPP6R1Q9UPN7 881 aa26.54■■□□□ 1.84
CD55-202ENST00000343420 ZMYM3Q14202 1370 aa26.54■■□□□ 1.84
CD55-202ENST00000343420 MAST1Q9Y2H9 1570 aa26.5■■□□□ 1.83
CD55-202ENST00000343420 NPATQ14207 1427 aa26.49■■□□□ 1.83
CD55-202ENST00000343420 ILDR1Q86SU0 546 aaPredicted RBP26.47■■□□□ 1.83
CD55-202ENST00000343420 KIF3BO15066 747 aa26.46■■□□□ 1.83
CD55-202ENST00000343420 STRCQ7RTU9 1775 aa26.43■■□□□ 1.82
CD55-202ENST00000343420 PTPN23Q9H3S7 1636 aa26.43■■□□□ 1.82
CD55-202ENST00000343420 FAM135AQ9P2D6 1515 aa26.41■■□□□ 1.82
CD55-202ENST00000343420 PTPRKQ15262 1439 aa26.4■■□□□ 1.82
CD55-202ENST00000343420 FGD6Q6ZV73 1430 aa26.39■■□□□ 1.81
CD55-202ENST00000343420 KDM5DQ9BY66 1539 aa26.38■■□□□ 1.81
CD55-202ENST00000343420 CROCC2H7BZ55 1655 aa26.38■■□□□ 1.81
CD55-202ENST00000343420 DMRT2Q9Y5R5 561 aa26.37■■□□□ 1.81
CD55-202ENST00000343420 TCOF1Q13428 1488 aaKnown RBP26.36■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms