RNA–Protein interactions for RNA: ENST00000343106.9

UBE2D3-203, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS P4 TSL 2 BASIC

Gene UBE2D3, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-203ENST00000343106 CDK11AQ9UQ88 783 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-203ENST00000343106 MIA2Q96PC5 1412 aa13.72□□□□□ -0.21
UBE2D3-203ENST00000343106 CFDP1Q9UEE9 299 aaPredicted RBP13.71□□□□□ -0.22
UBE2D3-203ENST00000343106 CHMP7Q8WUX9 453 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-203ENST00000343106 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
UBE2D3-203ENST00000343106 ABCC5O15440 1437 aa13.69□□□□□ -0.22
UBE2D3-203ENST00000343106 DAPK1P53355 1430 aa13.69□□□□□ -0.22
UBE2D3-203ENST00000343106 ANKRD30BQ9BXX2 1392 aa13.68□□□□□ -0.22
UBE2D3-203ENST00000343106 ADAMTS12P58397 1594 aa13.68□□□□□ -0.22
UBE2D3-203ENST00000343106 WDR62O43379 1518 aa13.68□□□□□ -0.22
UBE2D3-203ENST00000343106 MRS2Q9HD23 443 aa13.67□□□□□ -0.22
UBE2D3-203ENST00000343106 PRG4Q92954 1404 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-203ENST00000343106 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
UBE2D3-203ENST00000343106 RBM19Q9Y4C8 960 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-203ENST00000343106 CCDC7Q96M83 1385 aa13.65□□□□□ -0.22
UBE2D3-203ENST00000343106 AKNAQ7Z591 1439 aa13.65□□□□□ -0.22
UBE2D3-203ENST00000343106 DISP1Q96F81 1524 aa13.65□□□□□ -0.22
UBE2D3-203ENST00000343106 PBRM1Q86U86 1689 aa13.65□□□□□ -0.22
UBE2D3-203ENST00000343106 NUP153P49790 1475 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-203ENST00000343106 SENP3-EIF4A1A0A087X0R7 540 aa13.64□□□□□ -0.23
UBE2D3-203ENST00000343106 KIAA0586Q9BVV6 1533 aa13.64□□□□□ -0.23
UBE2D3-203ENST00000343106 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
UBE2D3-203ENST00000343106 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
UBE2D3-203ENST00000343106 ROCK1Q13464 1354 aa13.63□□□□□ -0.23
UBE2D3-203ENST00000343106 PKD2Q13563 968 aa13.63□□□□□ -0.23
UBE2D3-203ENST00000343106 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
UBE2D3-203ENST00000343106 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
UBE2D3-203ENST00000343106 RPRD2Q5VT52 1461 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-203ENST00000343106 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
UBE2D3-203ENST00000343106 JPH4Q96JJ6 628 aa13.6□□□□□ -0.23
UBE2D3-203ENST00000343106 NCOA1Q15788 1441 aa13.6□□□□□ -0.23
UBE2D3-203ENST00000343106 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
UBE2D3-203ENST00000343106 GRIN2AQ12879 1464 aa13.59□□□□□ -0.23
UBE2D3-203ENST00000343106 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
UBE2D3-203ENST00000343106 KIAA0556O60303 1618 aa13.58□□□□□ -0.24
UBE2D3-203ENST00000343106 PLEKHD1A6NEE1 506 aa13.57□□□□□ -0.24
UBE2D3-203ENST00000343106 TROQ12816 1431 aaPredicted RBP13.56□□□□□ -0.24
UBE2D3-203ENST00000343106 ERCC6Q03468 1493 aa13.56□□□□□ -0.24
UBE2D3-203ENST00000343106 TEX14Q8IWB6 1497 aa13.55□□□□□ -0.24
UBE2D3-203ENST00000343106 CAMSAP2Q08AD1 1489 aa13.55□□□□□ -0.24
UBE2D3-203ENST00000343106 GPATCH8Q9UKJ3 1502 aaKnown RBP13.55□□□□□ -0.24
UBE2D3-203ENST00000343106 HNRNPMP52272 730 aaKnown RBP eCLIP13.54□□□□□ -0.244e-13■■■■■ 32.7
UBE2D3-203ENST00000343106 PZPP20742 1482 aa13.54□□□□□ -0.24
UBE2D3-203ENST00000343106 SPATA31E1Q6ZUB1 1445 aa13.54□□□□□ -0.24
UBE2D3-203ENST00000343106 RAPGEF6Q8TEU7 1601 aa13.53□□□□□ -0.24
UBE2D3-203ENST00000343106 NUP155O75694 1391 aa13.53□□□□□ -0.24
UBE2D3-203ENST00000343106 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
UBE2D3-203ENST00000343106 DNMT1P26358 1616 aaKnown RBP13.53□□□□□ -0.24
UBE2D3-203ENST00000343106 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
UBE2D3-203ENST00000343106 TSPY4P0CV99 314 aa13.52□□□□□ -0.24
UBE2D3-203ENST00000343106 TSPY10P0CW01 314 aa13.52□□□□□ -0.24
UBE2D3-203ENST00000343106 USP47Q96K76 1375 aa13.52□□□□□ -0.25
UBE2D3-203ENST00000343106 CARD11Q9BXL7 1154 aa13.51□□□□□ -0.25
UBE2D3-203ENST00000343106 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
UBE2D3-203ENST00000343106 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
UBE2D3-203ENST00000343106 CARMIL2Q6F5E8 1435 aa13.5□□□□□ -0.25
UBE2D3-203ENST00000343106 PPP4R2Q9NY27 417 aa13.5□□□□□ -0.25
UBE2D3-203ENST00000343106 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
UBE2D3-203ENST00000343106 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
UBE2D3-203ENST00000343106 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
UBE2D3-203ENST00000343106 KIF14Q15058 1648 aa13.47□□□□□ -0.25
UBE2D3-203ENST00000343106 ST20-MTHFSA0A0A6YYL1 179 aa13.47□□□□□ -0.25
UBE2D3-203ENST00000343106 MSH5O43196 834 aa13.47□□□□□ -0.25
UBE2D3-203ENST00000343106 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
UBE2D3-203ENST00000343106 SYNJ2O15056 1496 aa13.47□□□□□ -0.25
UBE2D3-203ENST00000343106 RGL3Q3MIN7 710 aa13.46□□□□□ -0.25
UBE2D3-203ENST00000343106 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
UBE2D3-203ENST00000343106 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.26
UBE2D3-203ENST00000343106 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBE2D3-203ENST00000343106 MAGI1Q96QZ7 1491 aaPredicted RBP13.44□□□□□ -0.26
UBE2D3-203ENST00000343106 C9orf84Q5VXU9 1444 aa13.43□□□□□ -0.26
UBE2D3-203ENST00000343106 ATP10BO94823 1461 aa13.43□□□□□ -0.26
UBE2D3-203ENST00000343106 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
UBE2D3-203ENST00000343106 ERICH6BQ5W0A0 696 aa13.42□□□□□ -0.26
UBE2D3-203ENST00000343106 KIF15Q9NS87 1388 aa13.42□□□□□ -0.26
UBE2D3-203ENST00000343106 ADGRL2O95490 1459 aa13.41□□□□□ -0.26
UBE2D3-203ENST00000343106 PNISRQ8TF01 805 aaKnown RBP13.4□□□□□ -0.26
UBE2D3-203ENST00000343106 MBD5Q9P267 1494 aa13.4□□□□□ -0.26
UBE2D3-203ENST00000343106 NUP160Q12769 1436 aa13.39□□□□□ -0.27
UBE2D3-203ENST00000343106 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
UBE2D3-203ENST00000343106 PTPRGP23470 1445 aa13.38□□□□□ -0.27
UBE2D3-203ENST00000343106 ROCK2O75116 1388 aaKnown RBP13.38□□□□□ -0.27
UBE2D3-203ENST00000343106 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
UBE2D3-203ENST00000343106 ERICH6Q7L0X2 663 aa13.37□□□□□ -0.27
UBE2D3-203ENST00000343106 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
UBE2D3-203ENST00000343106 ABCC10Q5T3U5 1492 aa13.36□□□□□ -0.27
UBE2D3-203ENST00000343106 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
UBE2D3-203ENST00000343106 FANCIQ9NVI1 1328 aa13.35□□□□□ -0.27
UBE2D3-203ENST00000343106 ITSN2Q9NZM3 1697 aa13.35□□□□□ -0.27
UBE2D3-203ENST00000343106 CCDC136Q96JN2 1154 aa13.35□□□□□ -0.27
UBE2D3-203ENST00000343106 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
UBE2D3-203ENST00000343106 UHRF1BP1Q6BDS2 1440 aa13.33□□□□□ -0.28
UBE2D3-203ENST00000343106 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
UBE2D3-203ENST00000343106 CC2D1BQ5T0F9 858 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-203ENST00000343106 ADGBQ8N7X0 1667 aa13.31□□□□□ -0.28
UBE2D3-203ENST00000343106 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
UBE2D3-203ENST00000343106 ABCA8O94911 1581 aa13.31□□□□□ -0.28
UBE2D3-203ENST00000343106 KDM5CP41229 1560 aa13.31□□□□□ -0.28
UBE2D3-203ENST00000343106 ADCY10Q96PN6 1610 aa13.3□□□□□ -0.28
UBE2D3-203ENST00000343106 RALBP1Q15311 655 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms