RNA–Protein interactions for RNA: ENST00000342222.6

IKBKB-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 2

Gene IKBKB, Length 3,952 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-201ENST00000342222 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
IKBKB-201ENST00000342222 ERICH6BQ5W0A0 696 aa16.26■□□□□ 0.19
IKBKB-201ENST00000342222 DCAF11Q8TEB1 546 aa16.26■□□□□ 0.19
IKBKB-201ENST00000342222 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.196e-6■■■■□ 25.1
IKBKB-201ENST00000342222 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
IKBKB-201ENST00000342222 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
IKBKB-201ENST00000342222 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
IKBKB-201ENST00000342222 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
IKBKB-201ENST00000342222 MSH5O43196 834 aa16.23■□□□□ 0.19
IKBKB-201ENST00000342222 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
IKBKB-201ENST00000342222 NUDCQ9Y266 331 aa16.21■□□□□ 0.19
IKBKB-201ENST00000342222 FANCIQ9NVI1 1328 aa16.2■□□□□ 0.18
IKBKB-201ENST00000342222 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
IKBKB-201ENST00000342222 EHBP1L1Q8N3D4 1523 aa16.2■□□□□ 0.18
IKBKB-201ENST00000342222 NUP155O75694 1391 aa16.19■□□□□ 0.18
IKBKB-201ENST00000342222 SUPT6HQ7KZ85 1726 aaKnown RBP16.19■□□□□ 0.18
IKBKB-201ENST00000342222 USP47Q96K76 1375 aa16.18■□□□□ 0.18
IKBKB-201ENST00000342222 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
IKBKB-201ENST00000342222 CC2D1BQ5T0F9 858 aaKnown RBP16.18■□□□□ 0.18
IKBKB-201ENST00000342222 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
IKBKB-201ENST00000342222 DEKP35659 375 aaKnown RBP16.16■□□□□ 0.18
IKBKB-201ENST00000342222 CUL7Q14999 1698 aa16.15■□□□□ 0.18
IKBKB-201ENST00000342222 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
IKBKB-201ENST00000342222 URB2Q14146 1524 aaKnown RBP16.13■□□□□ 0.17
IKBKB-201ENST00000342222 AKNAQ7Z591 1439 aa16.13■□□□□ 0.17
IKBKB-201ENST00000342222 ANKRD30AQ9BXX3 1397 aa16.12■□□□□ 0.17
IKBKB-201ENST00000342222 LAS1LQ9Y4W2 734 aaKnown RBP16.11■□□□□ 0.17
IKBKB-201ENST00000342222 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
IKBKB-201ENST00000342222 HNRNPMP52272 730 aaKnown RBP eCLIP16.11■□□□□ 0.173e-7■■■■□ 24.6
IKBKB-201ENST00000342222 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
IKBKB-201ENST00000342222 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
IKBKB-201ENST00000342222 RCAN3Q9UKA8 241 aa16.08■□□□□ 0.17
IKBKB-201ENST00000342222 ROCK2O75116 1388 aaKnown RBP16.08■□□□□ 0.17
IKBKB-201ENST00000342222 MIA2Q96PC5 1412 aa16.08■□□□□ 0.16
IKBKB-201ENST00000342222 ANKRD30BQ9BXX2 1392 aa16.08■□□□□ 0.16
IKBKB-201ENST00000342222 WDR43Q15061 677 aaKnown RBP eCLIP16.07■□□□□ 0.16
IKBKB-201ENST00000342222 DAPK1P53355 1430 aa16.07■□□□□ 0.16
IKBKB-201ENST00000342222 NCOA1Q15788 1441 aa16.06■□□□□ 0.16
IKBKB-201ENST00000342222 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
IKBKB-201ENST00000342222 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
IKBKB-201ENST00000342222 HECW1Q76N89 1606 aa16.05■□□□□ 0.16
IKBKB-201ENST00000342222 PRG4Q92954 1404 aaPredicted RBP16.04■□□□□ 0.16
IKBKB-201ENST00000342222 CANXP27824 592 aaKnown RBP16.04■□□□□ 0.16
IKBKB-201ENST00000342222 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
IKBKB-201ENST00000342222 UGGT2Q9NYU1 1516 aa16.03■□□□□ 0.16
IKBKB-201ENST00000342222 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
IKBKB-201ENST00000342222 RALBP1Q15311 655 aa16.03■□□□□ 0.16
IKBKB-201ENST00000342222 IPO9Q96P70 1041 aaKnown RBP16.03■□□□□ 0.16
IKBKB-201ENST00000342222 KTN1Q86UP2 1357 aaKnown RBP16.03■□□□□ 0.16
IKBKB-201ENST00000342222 PLIN1O60240 522 aa16.02■□□□□ 0.16
IKBKB-201ENST00000342222 KIF15Q9NS87 1388 aa16.02■□□□□ 0.16
IKBKB-201ENST00000342222 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.15
IKBKB-201ENST00000342222 ABCC5O15440 1437 aa16.01■□□□□ 0.15
IKBKB-201ENST00000342222 NLRP13Q86W25 1043 aa16.01■□□□□ 0.15
IKBKB-201ENST00000342222 ERCC6Q03468 1493 aa16■□□□□ 0.15
IKBKB-201ENST00000342222 THOC2Q8NI27 1593 aaKnown RBP16■□□□□ 0.15
IKBKB-201ENST00000342222 RPRD2Q5VT52 1461 aaKnown RBP16■□□□□ 0.15
IKBKB-201ENST00000342222 ANKRD50Q9ULJ7 1429 aa16■□□□□ 0.15
IKBKB-201ENST00000342222 NEFMP07197 916 aa16■□□□□ 0.15
IKBKB-201ENST00000342222 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
IKBKB-201ENST00000342222 KNSTRNQ9Y448 316 aa16■□□□□ 0.15
IKBKB-201ENST00000342222 IQGAP2Q13576 1575 aa15.99■□□□□ 0.15
IKBKB-201ENST00000342222 CARMIL2Q6F5E8 1435 aa15.99■□□□□ 0.15
IKBKB-201ENST00000342222 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
IKBKB-201ENST00000342222 CHGAP10645 457 aaKnown RBP15.97■□□□□ 0.15
IKBKB-201ENST00000342222 MAGI3Q5TCQ9 1506 aa15.96■□□□□ 0.15
IKBKB-201ENST00000342222 KIAA1107Q9UPP5 1409 aa15.96■□□□□ 0.15
IKBKB-201ENST00000342222 RGS3P49796 1198 aa15.96■□□□□ 0.15
IKBKB-201ENST00000342222 TMF1P82094 1093 aa15.96■□□□□ 0.15
IKBKB-201ENST00000342222 RTN4Q9NQC3 1192 aaKnown RBP15.96■□□□□ 0.15
IKBKB-201ENST00000342222 ROCK1Q13464 1354 aa15.96■□□□□ 0.15
IKBKB-201ENST00000342222 LAMC3Q9Y6N6 1575 aa15.95■□□□□ 0.14
IKBKB-201ENST00000342222 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
IKBKB-201ENST00000342222 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
IKBKB-201ENST00000342222 PANK3Q9H999 370 aa15.94■□□□□ 0.14
IKBKB-201ENST00000342222 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.94■□□□□ 0.14
IKBKB-201ENST00000342222 TCERG1O14776 1098 aaKnown RBP15.93■□□□□ 0.14
IKBKB-201ENST00000342222 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
IKBKB-201ENST00000342222 TROQ12816 1431 aaPredicted RBP15.92■□□□□ 0.14
IKBKB-201ENST00000342222 KDM6BO15054 1643 aa15.92■□□□□ 0.14
IKBKB-201ENST00000342222 PDE4AP27815 886 aa15.92■□□□□ 0.14
IKBKB-201ENST00000342222 TCOF1Q13428 1488 aaKnown RBP15.91■□□□□ 0.14
IKBKB-201ENST00000342222 CCDC144AA2RUR9 1427 aa15.91■□□□□ 0.14
IKBKB-201ENST00000342222 NEUROD2Q15784 382 aa15.89■□□□□ 0.13
IKBKB-201ENST00000342222 SENP3Q9H4L4 574 aaPredicted RBP15.89■□□□□ 0.13
IKBKB-201ENST00000342222 ARID4BQ4LE39 1312 aaPredicted RBP15.89■□□□□ 0.13
IKBKB-201ENST00000342222 SAMD9Q5K651 1589 aa15.89■□□□□ 0.13
IKBKB-201ENST00000342222 CRBNQ96SW2 442 aa15.89■□□□□ 0.13
IKBKB-201ENST00000342222 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
IKBKB-201ENST00000342222 CAMSAP2Q08AD1 1489 aa15.88■□□□□ 0.13
IKBKB-201ENST00000342222 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
IKBKB-201ENST00000342222 PDE3BQ13370 1112 aa15.87■□□□□ 0.13
IKBKB-201ENST00000342222 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
IKBKB-201ENST00000342222 TNNT2P45379 298 aaPredicted RBP15.87■□□□□ 0.13
IKBKB-201ENST00000342222 DDRGK1Q96HY6 314 aa15.87■□□□□ 0.13
IKBKB-201ENST00000342222 SKAP1Q86WV1 359 aa15.85■□□□□ 0.13
IKBKB-201ENST00000342222 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
IKBKB-201ENST00000342222 KIAA0586Q9BVV6 1533 aa15.85■□□□□ 0.13
IKBKB-201ENST00000342222 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
IKBKB-201ENST00000342222 C9orf84Q5VXU9 1444 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms