RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
CNTNAP3B-202ENST00000341990 ABCC5O15440 1437 aa27.72■■■□□ 2.03
CNTNAP3B-202ENST00000341990 ANKRD30BQ9BXX2 1392 aa27.71■■■□□ 2.03
CNTNAP3B-202ENST00000341990 CNTLNQ9NXG0 1405 aa27.71■■■□□ 2.03
CNTNAP3B-202ENST00000341990 DISP1Q96F81 1524 aa27.7■■■□□ 2.02
CNTNAP3B-202ENST00000341990 NUP153P49790 1475 aaKnown RBP27.69■■■□□ 2.02
CNTNAP3B-202ENST00000341990 RBM19Q9Y4C8 960 aaKnown RBP27.69■■■□□ 2.02
CNTNAP3B-202ENST00000341990 ROCK1Q13464 1354 aa27.67■■■□□ 2.02
CNTNAP3B-202ENST00000341990 CCDC7Q96M83 1385 aa27.67■■■□□ 2.02
CNTNAP3B-202ENST00000341990 KIAA0556O60303 1618 aa27.67■■■□□ 2.02
CNTNAP3B-202ENST00000341990 RPRD2Q5VT52 1461 aaKnown RBP27.67■■■□□ 2.02
CNTNAP3B-202ENST00000341990 ANP32EQ9BTT0 268 aa27.66■■■□□ 2.02
CNTNAP3B-202ENST00000341990 SLC4A1APQ9BWU0 796 aaKnown RBP27.66■■■□□ 2.02
CNTNAP3B-202ENST00000341990 NCOA1Q15788 1441 aa27.66■■■□□ 2.02
CNTNAP3B-202ENST00000341990 DNMT1P26358 1616 aaKnown RBP27.65■■■□□ 2.02
CNTNAP3B-202ENST00000341990 TEX14Q8IWB6 1497 aa27.65■■■□□ 2.02
CNTNAP3B-202ENST00000341990 KIAA0586Q9BVV6 1533 aa27.63■■■□□ 2.01
CNTNAP3B-202ENST00000341990 PRKRIP1Q9H875 184 aaPredicted RBP27.62■■■□□ 2.01
CNTNAP3B-202ENST00000341990 FAM9BQ8IZU0 186 aa27.59■■■□□ 2.01
CNTNAP3B-202ENST00000341990 RAPGEF6Q8TEU7 1601 aa27.58■■■□□ 2.01
CNTNAP3B-202ENST00000341990 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
CNTNAP3B-202ENST00000341990 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
CNTNAP3B-202ENST00000341990 KIF7Q2M1P5 1343 aa27.56■■■□□ 2
CNTNAP3B-202ENST00000341990 MRS2Q9HD23 443 aa27.55■■■□□ 2
CNTNAP3B-202ENST00000341990 CDK11AQ9UQ88 783 aaPredicted RBP27.54■■■□□ 2
CNTNAP3B-202ENST00000341990 SPATA31E1Q6ZUB1 1445 aa27.54■■■□□ 2
CNTNAP3B-202ENST00000341990 GRIN2AQ12879 1464 aa27.54■■■□□ 2
CNTNAP3B-202ENST00000341990 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
CNTNAP3B-202ENST00000341990 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
CNTNAP3B-202ENST00000341990 PZPP20742 1482 aa27.52■■■□□ 2
CNTNAP3B-202ENST00000341990 CAMSAP2Q08AD1 1489 aa27.51■■□□□ 1.99
CNTNAP3B-202ENST00000341990 PLB1Q6P1J6 1458 aa27.49■■□□□ 1.99
CNTNAP3B-202ENST00000341990 TROQ12816 1431 aaPredicted RBP27.48■■□□□ 1.99
CNTNAP3B-202ENST00000341990 EIF4G3O43432 1585 aaKnown RBP27.47■■□□□ 1.99
CNTNAP3B-202ENST00000341990 CNGB1Q14028 1251 aaPredicted RBP27.47■■□□□ 1.99
CNTNAP3B-202ENST00000341990 ZNF326Q5BKZ1 582 aaKnown RBP27.46■■□□□ 1.99
CNTNAP3B-202ENST00000341990 KIF14Q15058 1648 aa27.44■■□□□ 1.98
CNTNAP3B-202ENST00000341990 GPATCH8Q9UKJ3 1502 aaKnown RBP27.44■■□□□ 1.98
CNTNAP3B-202ENST00000341990 FBLN2P98095 1184 aa27.41■■□□□ 1.98
CNTNAP3B-202ENST00000341990 POLR3GLQ9BT43 218 aa27.4■■□□□ 1.98
CNTNAP3B-202ENST00000341990 PKD2Q13563 968 aa27.4■■□□□ 1.98
CNTNAP3B-202ENST00000341990 CHMP7Q8WUX9 453 aaPredicted RBP27.4■■□□□ 1.98
CNTNAP3B-202ENST00000341990 ZBED9Q6R2W3 1325 aa27.39■■□□□ 1.98
CNTNAP3B-202ENST00000341990 CEP170Q5SW79 1584 aa27.38■■□□□ 1.97
CNTNAP3B-202ENST00000341990 POLR1AO95602 1720 aaPredicted RBP27.37■■□□□ 1.97
CNTNAP3B-202ENST00000341990 KIAA1107Q9UPP5 1409 aa27.37■■□□□ 1.97
CNTNAP3B-202ENST00000341990 MBD5Q9P267 1494 aa27.37■■□□□ 1.97
CNTNAP3B-202ENST00000341990 USP47Q96K76 1375 aa27.35■■□□□ 1.97
CNTNAP3B-202ENST00000341990 ADGBQ8N7X0 1667 aa27.35■■□□□ 1.97
CNTNAP3B-202ENST00000341990 ITSN2Q9NZM3 1697 aa27.35■■□□□ 1.97
CNTNAP3B-202ENST00000341990 MSH5O43196 834 aa27.34■■□□□ 1.97
CNTNAP3B-202ENST00000341990 BCORL1Q5H9F3 1711 aa27.33■■□□□ 1.97
CNTNAP3B-202ENST00000341990 DHX29Q7Z478 1369 aaKnown RBP27.33■■□□□ 1.97
CNTNAP3B-202ENST00000341990 PPP4R2Q9NY27 417 aa27.32■■□□□ 1.96
CNTNAP3B-202ENST00000341990 ADGRL2O95490 1459 aa27.32■■□□□ 1.96
CNTNAP3B-202ENST00000341990 ANKRD30AQ9BXX3 1397 aa27.31■■□□□ 1.96
CNTNAP3B-202ENST00000341990 CROCC2H7BZ55 1655 aa27.3■■□□□ 1.96
CNTNAP3B-202ENST00000341990 ANKRD50Q9ULJ7 1429 aa27.29■■□□□ 1.96
CNTNAP3B-202ENST00000341990 B4GALNT3Q6L9W6 998 aa27.29■■□□□ 1.96
CNTNAP3B-202ENST00000341990 JPH4Q96JJ6 628 aa27.29■■□□□ 1.96
CNTNAP3B-202ENST00000341990 SENP3-EIF4A1A0A087X0R7 540 aa27.28■■□□□ 1.96
CNTNAP3B-202ENST00000341990 MAGI1Q96QZ7 1491 aaPredicted RBP27.28■■□□□ 1.96
CNTNAP3B-202ENST00000341990 ADCY10Q96PN6 1610 aa27.28■■□□□ 1.96
CNTNAP3B-202ENST00000341990 ERICH6BQ5W0A0 696 aa27.27■■□□□ 1.96
CNTNAP3B-202ENST00000341990 SYNJ2O15056 1496 aa27.27■■□□□ 1.96
CNTNAP3B-202ENST00000341990 NUP155O75694 1391 aa27.24■■□□□ 1.95
CNTNAP3B-202ENST00000341990 ERCC6Q03468 1493 aa27.23■■□□□ 1.95
CNTNAP3B-202ENST00000341990 CARMIL2Q6F5E8 1435 aa27.22■■□□□ 1.95
CNTNAP3B-202ENST00000341990 KDM5CP41229 1560 aa27.22■■□□□ 1.95
CNTNAP3B-202ENST00000341990 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
CNTNAP3B-202ENST00000341990 C9orf84Q5VXU9 1444 aa27.2■■□□□ 1.94
CNTNAP3B-202ENST00000341990 CDC42BPAQ5VT25 1732 aa27.19■■□□□ 1.94
CNTNAP3B-202ENST00000341990 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
CNTNAP3B-202ENST00000341990 FANCIQ9NVI1 1328 aa27.17■■□□□ 1.94
CNTNAP3B-202ENST00000341990 CARD11Q9BXL7 1154 aa27.17■■□□□ 1.94
CNTNAP3B-202ENST00000341990 NUP160Q12769 1436 aa27.17■■□□□ 1.94
CNTNAP3B-202ENST00000341990 ABCC10Q5T3U5 1492 aa27.16■■□□□ 1.94
CNTNAP3B-202ENST00000341990 ATP10BO94823 1461 aa27.16■■□□□ 1.94
CNTNAP3B-202ENST00000341990 HNRNPMP52272 730 aaKnown RBP eCLIP27.14■■□□□ 1.94
CNTNAP3B-202ENST00000341990 UHRF1BP1Q6BDS2 1440 aa27.13■■□□□ 1.93
CNTNAP3B-202ENST00000341990 RALGAPBQ86X10 1494 aa27.13■■□□□ 1.93
CNTNAP3B-202ENST00000341990 SMG6Q86US8 1419 aaKnown RBP27.11■■□□□ 1.93
CNTNAP3B-202ENST00000341990 ABCA8O94911 1581 aa27.11■■□□□ 1.93
CNTNAP3B-202ENST00000341990 TSPY4P0CV99 314 aa27.11■■□□□ 1.93
CNTNAP3B-202ENST00000341990 TSPY10P0CW01 314 aa27.11■■□□□ 1.93
CNTNAP3B-202ENST00000341990 ST20-MTHFSA0A0A6YYL1 179 aa27.1■■□□□ 1.93
CNTNAP3B-202ENST00000341990 SHANK2Q9UPX8 1470 aa27.09■■□□□ 1.93
CNTNAP3B-202ENST00000341990 KIF15Q9NS87 1388 aa27.09■■□□□ 1.93
CNTNAP3B-202ENST00000341990 DCAF11Q8TEB1 546 aa27.09■■□□□ 1.93
CNTNAP3B-202ENST00000341990 ARID4BQ4LE39 1312 aaPredicted RBP27.08■■□□□ 1.93
CNTNAP3B-202ENST00000341990 PNISRQ8TF01 805 aaKnown RBP27.08■■□□□ 1.93
CNTNAP3B-202ENST00000341990 NUDCQ9Y266 331 aa27.07■■□□□ 1.92
CNTNAP3B-202ENST00000341990 TMC1Q8TDI8 760 aa27.06■■□□□ 1.92
CNTNAP3B-202ENST00000341990 ARHGEF12Q9NZN5 1544 aa27.04■■□□□ 1.92
CNTNAP3B-202ENST00000341990 ROCK2O75116 1388 aaKnown RBP27.02■■□□□ 1.92
CNTNAP3B-202ENST00000341990 KDM5DQ9BY66 1539 aa27.02■■□□□ 1.92
CNTNAP3B-202ENST00000341990 PTPRGP23470 1445 aa27■■□□□ 1.91
CNTNAP3B-202ENST00000341990 RNF123Q5XPI4 1314 aa26.97■■□□□ 1.91
CNTNAP3B-202ENST00000341990 ERICH6Q7L0X2 663 aa26.95■■□□□ 1.91
CNTNAP3B-202ENST00000341990 FAM135AQ9P2D6 1515 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms