RNA–Protein interactions for RNA: ENST00000339362.9

NEO1-202, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene NEO1, Length 7,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-202ENST00000339362 PTMSP20962 102 aa20.86■□□□□ 0.93
NEO1-202ENST00000339362 PLEKHD1A6NEE1 506 aa20.85■□□□□ 0.93
NEO1-202ENST00000339362 DEKP35659 375 aaKnown RBP20.84■□□□□ 0.93
NEO1-202ENST00000339362 TPM4P67936 248 aa20.84■□□□□ 0.93
NEO1-202ENST00000339362 SOX12O15370 315 aa20.84■□□□□ 0.93
NEO1-202ENST00000339362 VPS53Q5VIR6 699 aa20.84■□□□□ 0.93
NEO1-202ENST00000339362 RASSF8Q8NHQ8 419 aa20.84■□□□□ 0.93
NEO1-202ENST00000339362 KNSTRNQ9Y448 316 aa20.83■□□□□ 0.92
NEO1-202ENST00000339362 U2SURPO15042 1029 aaKnown RBP20.82■□□□□ 0.92
NEO1-202ENST00000339362 SIN3AQ96ST3 1273 aa20.81■□□□□ 0.92
NEO1-202ENST00000339362 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
NEO1-202ENST00000339362 ZNF330Q9Y3S2 320 aaPredicted RBP20.8■□□□□ 0.92
NEO1-202ENST00000339362 CFDP1Q9UEE9 299 aaPredicted RBP20.79■□□□□ 0.92
NEO1-202ENST00000339362 PES1O00541 588 aaKnown RBP20.78■□□□□ 0.92
NEO1-202ENST00000339362 KCNH8Q96L42 1107 aa20.78■□□□□ 0.92
NEO1-202ENST00000339362 CARD11Q9BXL7 1154 aa20.78■□□□□ 0.92
NEO1-202ENST00000339362 KIAA1211Q6ZU35 1233 aa20.77■□□□□ 0.92
NEO1-202ENST00000339362 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
NEO1-202ENST00000339362 NUDCQ9Y266 331 aa20.75■□□□□ 0.91
NEO1-202ENST00000339362 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
NEO1-202ENST00000339362 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
NEO1-202ENST00000339362 CCNB3Q8WWL7 1395 aa20.74■□□□□ 0.91
NEO1-202ENST00000339362 TPM3P06753 285 aa20.73■□□□□ 0.91
NEO1-202ENST00000339362 CDCA8Q53HL2 280 aa20.73■□□□□ 0.91
NEO1-202ENST00000339362 CCAR2Q8N163 923 aaKnown RBP20.73■□□□□ 0.91
NEO1-202ENST00000339362 CHMP4BQ9H444 224 aaKnown RBP20.73■□□□□ 0.91
NEO1-202ENST00000339362 USP35Q9P2H5 1018 aa20.72■□□□□ 0.91
NEO1-202ENST00000339362 PPP4R2Q9NY27 417 aa20.71■□□□□ 0.91
NEO1-202ENST00000339362 G3V3G9 751 aa20.71■□□□□ 0.91
NEO1-202ENST00000339362 DCAF8Q5TAQ9 597 aa20.71■□□□□ 0.91
NEO1-202ENST00000339362 CECR2Q9BXF3 1484 aa20.71■□□□□ 0.91
NEO1-202ENST00000339362 SOGA1O94964 1423 aa20.71■□□□□ 0.91
NEO1-202ENST00000339362 CC2D1BQ5T0F9 858 aaKnown RBP20.7■□□□□ 0.91
NEO1-202ENST00000339362 MARCH6O60337 910 aa20.7■□□□□ 0.9
NEO1-202ENST00000339362 POGKQ9P215 609 aa20.7■□□□□ 0.9
NEO1-202ENST00000339362 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
NEO1-202ENST00000339362 FHAD1B1AJZ9 1412 aa20.67■□□□□ 0.9
NEO1-202ENST00000339362 HTATSF1O43719 755 aaKnown RBP20.67■□□□□ 0.9
NEO1-202ENST00000339362 GBP4Q96PP9 640 aa20.65■□□□□ 0.9
NEO1-202ENST00000339362 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
NEO1-202ENST00000339362 MS4A1P11836 297 aa20.63■□□□□ 0.89
NEO1-202ENST00000339362 NOL8Q76FK4 1167 aaKnown RBP20.63■□□□□ 0.89
NEO1-202ENST00000339362 TPD52L1Q16890 204 aaPredicted RBP20.63■□□□□ 0.89
NEO1-202ENST00000339362 SYAP1Q96A49 352 aaPredicted RBP20.63■□□□□ 0.89
NEO1-202ENST00000339362 GORABQ5T7V8 394 aa20.62■□□□□ 0.89
NEO1-202ENST00000339362 SLKQ9H2G2 1235 aaPredicted RBP20.62■□□□□ 0.89
NEO1-202ENST00000339362 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
NEO1-202ENST00000339362 CCDC34Q96HJ3 373 aa20.59■□□□□ 0.89
NEO1-202ENST00000339362 TIMELESSQ9UNS1 1208 aa20.59■□□□□ 0.89
NEO1-202ENST00000339362 ZNF771Q7L3S4 317 aaPredicted RBP20.59■□□□□ 0.89
NEO1-202ENST00000339362 VPS8Q8N3P4 1428 aa20.59■□□□□ 0.89
NEO1-202ENST00000339362 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.89
NEO1-202ENST00000339362 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.89
NEO1-202ENST00000339362 CARMIL1Q5VZK9 1371 aa20.57■□□□□ 0.88
NEO1-202ENST00000339362 RTF1Q92541 710 aaKnown RBP20.57■□□□□ 0.88
NEO1-202ENST00000339362 SETD5Q9C0A6 1442 aa20.57■□□□□ 0.88
NEO1-202ENST00000339362 TOMM22Q9NS69 142 aa20.56■□□□□ 0.88
NEO1-202ENST00000339362 CUX2O14529 1486 aa20.56■□□□□ 0.88
NEO1-202ENST00000339362 TSR1Q2NL82 804 aaKnown RBP20.56■□□□□ 0.88
NEO1-202ENST00000339362 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.56■□□□□ 0.88
NEO1-202ENST00000339362 CCER2I3L3R5 266 aa20.55■□□□□ 0.88
NEO1-202ENST00000339362 TRIM6-TRIM34B2RNG4 842 aa20.53■□□□□ 0.88
NEO1-202ENST00000339362 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
NEO1-202ENST00000339362 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
NEO1-202ENST00000339362 APPP05067 770 aa20.52■□□□□ 0.87
NEO1-202ENST00000339362 GOLGA6L3A6NEY3 463 aa20.51■□□□□ 0.87
NEO1-202ENST00000339362 HSP90AA2PQ14568 343 aaPredicted RBP20.51■□□□□ 0.87
NEO1-202ENST00000339362 CCDC9Q9Y3X0 531 aaKnown RBP20.51■□□□□ 0.87
NEO1-202ENST00000339362 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
NEO1-202ENST00000339362 CCDC88BA6NC98 1476 aa20.5■□□□□ 0.87
NEO1-202ENST00000339362 SF3A1Q15459 793 aaKnown RBP20.5■□□□□ 0.87
NEO1-202ENST00000339362 CCDC70Q6NSX1 233 aa20.5■□□□□ 0.87
NEO1-202ENST00000339362 TCEAL9Q9UHQ7 104 aa20.5■□□□□ 0.87
NEO1-202ENST00000339362 ZNF592Q92610 1267 aa20.49■□□□□ 0.87
NEO1-202ENST00000339362 RAD21O60216 631 aa20.49■□□□□ 0.87
NEO1-202ENST00000339362 PCMTD1Q96MG8 357 aaPredicted RBP20.49■□□□□ 0.87
NEO1-202ENST00000339362 MROH2BQ7Z745 1585 aa20.49■□□□□ 0.87
NEO1-202ENST00000339362 FRAT2O75474 233 aaPredicted RBP20.49■□□□□ 0.87
NEO1-202ENST00000339362 CFAP44Q96MT7 982 aa20.48■□□□□ 0.87
NEO1-202ENST00000339362 DCAF11Q8TEB1 546 aa20.47■□□□□ 0.87
NEO1-202ENST00000339362 CALD1Q05682 793 aaKnown RBP20.47■□□□□ 0.87
NEO1-202ENST00000339362 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
NEO1-202ENST00000339362 HSPA5P11021 654 aaKnown RBP20.46■□□□□ 0.87
NEO1-202ENST00000339362 TMF1P82094 1093 aa20.46■□□□□ 0.87
NEO1-202ENST00000339362 KANK4Q5T7N3 995 aaPredicted RBP20.46■□□□□ 0.87
NEO1-202ENST00000339362 TPM2P07951 284 aa20.46■□□□□ 0.87
NEO1-202ENST00000339362 CSPP1Q1MSJ5 1256 aa20.46■□□□□ 0.87
NEO1-202ENST00000339362 GPS2Q13227 327 aa20.45■□□□□ 0.86
NEO1-202ENST00000339362 MFAP1P55081 439 aaKnown RBP20.45■□□□□ 0.86
NEO1-202ENST00000339362 PAK3O75914 559 aaPredicted RBP20.45■□□□□ 0.86
NEO1-202ENST00000339362 CSB-PGBD3P0DP91 1061 aa20.45■□□□□ 0.86
NEO1-202ENST00000339362 PLCD4Q9BRC7 762 aa20.44■□□□□ 0.86
NEO1-202ENST00000339362 MAP7D2Q96T17 732 aa20.44■□□□□ 0.86
NEO1-202ENST00000339362 SAFB2Q14151 953 aaKnown RBP eCLIP20.43■□□□□ 0.86
NEO1-202ENST00000339362 GPATCH3Q96I76 525 aa20.43■□□□□ 0.86
NEO1-202ENST00000339362 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
NEO1-202ENST00000339362 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
NEO1-202ENST00000339362 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
NEO1-202ENST00000339362 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.42■□□□□ 0.86
NEO1-202ENST00000339362 ITPRIPQ8IWB1 547 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms