RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 YEATS2Q9ULM3 1422 aa31.57■■■□□ 2.65
ITGA4-202ENST00000339307 LRRIQ1Q96JM4 1722 aa31.57■■■□□ 2.64
ITGA4-202ENST00000339307 MADDQ8WXG6 1647 aa31.56■■■□□ 2.64
ITGA4-202ENST00000339307 ZMYM4Q5VZL5 1548 aa31.55■■■□□ 2.64
ITGA4-202ENST00000339307 MLECQ14165 292 aa31.55■■■□□ 2.64
ITGA4-202ENST00000339307 ARHGAP5Q13017 1502 aa31.55■■■□□ 2.64
ITGA4-202ENST00000339307 POGZQ7Z3K3 1410 aa31.54■■■□□ 2.64
ITGA4-202ENST00000339307 MYT1LQ9UL68 1186 aa31.54■■■□□ 2.64
ITGA4-202ENST00000339307 PCF11O94913 1555 aaKnown RBP31.54■■■□□ 2.64
ITGA4-202ENST00000339307 CASKIN1Q8WXD9 1431 aa31.53■■■□□ 2.64
ITGA4-202ENST00000339307 MAGI2Q86UL8 1455 aa31.52■■■□□ 2.64
ITGA4-202ENST00000339307 CCDC18Q5T9S5 1454 aa31.5■■■□□ 2.63
ITGA4-202ENST00000339307 RIMS1Q86UR5 1692 aaKnown RBP31.48■■■□□ 2.63
ITGA4-202ENST00000339307 AFAP1Q8N556 730 aa31.45■■■□□ 2.63
ITGA4-202ENST00000339307 ILDR1Q86SU0 546 aaPredicted RBP31.44■■■□□ 2.62
ITGA4-202ENST00000339307 ATP10AO60312 1499 aa31.41■■■□□ 2.62
ITGA4-202ENST00000339307 SIGLEC1Q9BZZ2 1709 aa31.41■■■□□ 2.62
ITGA4-202ENST00000339307 ZNF518AQ6AHZ1 1483 aa31.4■■■□□ 2.62
ITGA4-202ENST00000339307 FYCO1Q9BQS8 1478 aa31.4■■■□□ 2.62
ITGA4-202ENST00000339307 CDC42BPBQ9Y5S2 1711 aa31.37■■■□□ 2.61
ITGA4-202ENST00000339307 C9orf84Q5VXU9 1444 aa31.37■■■□□ 2.61
ITGA4-202ENST00000339307 ZNF777Q9ULD5 760 aaPredicted RBP31.34■■■□□ 2.61
ITGA4-202ENST00000339307 PREX2Q70Z35 1606 aa31.32■■■□□ 2.61
ITGA4-202ENST00000339307 FER1L4A9Z1Z3 1794 aa31.3■■■□□ 2.6
ITGA4-202ENST00000339307 KDM5CP41229 1560 aa31.28■■■□□ 2.6
ITGA4-202ENST00000339307 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
ITGA4-202ENST00000339307 TRAPPC8Q9Y2L5 1435 aa31.25■■■□□ 2.59
ITGA4-202ENST00000339307 HSPA2P54652 639 aa31.25■■■□□ 2.59
ITGA4-202ENST00000339307 CDC42BPAQ5VT25 1732 aa31.25■■■□□ 2.59
ITGA4-202ENST00000339307 ABCC1P33527 1531 aa31.24■■■□□ 2.59
ITGA4-202ENST00000339307 ARHGEF12Q9NZN5 1544 aa31.24■■■□□ 2.59
ITGA4-202ENST00000339307 ITSN2Q9NZM3 1697 aa31.21■■■□□ 2.59
ITGA4-202ENST00000339307 MTUS2Q5JR59 1369 aa31.2■■■□□ 2.59
ITGA4-202ENST00000339307 DIP2CQ9Y2E4 1556 aa31.2■■■□□ 2.59
ITGA4-202ENST00000339307 CEBPAP49715 358 aaPredicted RBP31.2■■■□□ 2.59
ITGA4-202ENST00000339307 MLH3Q9UHC1 1453 aa31.19■■■□□ 2.58
ITGA4-202ENST00000339307 CFDP1Q9UEE9 299 aaPredicted RBP31.17■■■□□ 2.58
ITGA4-202ENST00000339307 CCNB3Q8WWL7 1395 aa31.17■■■□□ 2.58
ITGA4-202ENST00000339307 GPATCH8Q9UKJ3 1502 aaKnown RBP31.16■■■□□ 2.58
ITGA4-202ENST00000339307 HNRNPMP52272 730 aaKnown RBP eCLIP31.16■■■□□ 2.58
ITGA4-202ENST00000339307 ESF1Q9H501 851 aaKnown RBP31.16■■■□□ 2.58
ITGA4-202ENST00000339307 ABCA6Q8N139 1617 aa31.16■■■□□ 2.58
ITGA4-202ENST00000339307 CEP162Q5TB80 1403 aa31.14■■■□□ 2.58
ITGA4-202ENST00000339307 SAMD9LQ8IVG5 1584 aa31.12■■■□□ 2.57
ITGA4-202ENST00000339307 SYCP2Q9BX26 1530 aa31.1■■■□□ 2.57
ITGA4-202ENST00000339307 SPAG9O60271 1321 aaKnown RBP31.1■■■□□ 2.57
ITGA4-202ENST00000339307 REREQ9P2R6 1566 aa31.09■■■□□ 2.57
ITGA4-202ENST00000339307 KIDINS220Q9ULH0 1771 aa31.07■■■□□ 2.57
ITGA4-202ENST00000339307 PLEKHH2Q8IVE3 1493 aa31.02■■■□□ 2.56
ITGA4-202ENST00000339307 AGLP35573 1532 aa31.01■■■□□ 2.56
ITGA4-202ENST00000339307 LOC105371045A0A1W2PR82 267 aa31.01■■■□□ 2.55
ITGA4-202ENST00000339307 FBXO41Q8TF61 875 aa31■■■□□ 2.55
ITGA4-202ENST00000339307 EHBP1L1Q8N3D4 1523 aa31■■■□□ 2.55
ITGA4-202ENST00000339307 PREX1Q8TCU6 1659 aa31■■■□□ 2.55
ITGA4-202ENST00000339307 KIAA1107Q9UPP5 1409 aa30.99■■■□□ 2.55
ITGA4-202ENST00000339307 ZNF644Q9H582 1327 aaPredicted RBP30.98■■■□□ 2.55
ITGA4-202ENST00000339307 UHRF1BP1Q6BDS2 1440 aa30.96■■■□□ 2.55
ITGA4-202ENST00000339307 TIAM1Q13009 1591 aa30.95■■■□□ 2.55
ITGA4-202ENST00000339307 ATP7AQ04656 1500 aa30.95■■■□□ 2.54
ITGA4-202ENST00000339307 SUPT6HQ7KZ85 1726 aaKnown RBP30.94■■■□□ 2.54
ITGA4-202ENST00000339307 C3P01024 1663 aa30.93■■■□□ 2.54
ITGA4-202ENST00000339307 CNTLNQ9NXG0 1405 aa30.89■■■□□ 2.54
ITGA4-202ENST00000339307 SETD1BQ9UPS6 1966 aaKnown RBP30.88■■■□□ 2.53
ITGA4-202ENST00000339307 GGT6Q6P531 493 aa30.88■■■□□ 2.53
ITGA4-202ENST00000339307 A2MP01023 1474 aa30.87■■■□□ 2.53
ITGA4-202ENST00000339307 INO80Q9ULG1 1556 aaPredicted RBP30.87■■■□□ 2.53
ITGA4-202ENST00000339307 NCOA2Q15596 1464 aa30.84■■■□□ 2.53
ITGA4-202ENST00000339307 DMRT2Q9Y5R5 561 aa30.82■■■□□ 2.52
ITGA4-202ENST00000339307 ZMYM3Q14202 1370 aa30.81■■■□□ 2.52
ITGA4-202ENST00000339307 MBD5Q9P267 1494 aa30.8■■■□□ 2.52
ITGA4-202ENST00000339307 VPS8Q8N3P4 1428 aa30.79■■■□□ 2.52
ITGA4-202ENST00000339307 CERKQ8TCT0 537 aa30.79■■■□□ 2.52
ITGA4-202ENST00000339307 PLXNC1O60486 1568 aa30.77■■■□□ 2.52
ITGA4-202ENST00000339307 CLTCQ00610 1675 aaKnown RBP30.76■■■□□ 2.52
ITGA4-202ENST00000339307 ADGBQ8N7X0 1667 aa30.76■■■□□ 2.52
ITGA4-202ENST00000339307 STRCQ7RTU9 1775 aa30.75■■■□□ 2.51
ITGA4-202ENST00000339307 MROH2AA6NES4 1674 aa30.74■■■□□ 2.51
ITGA4-202ENST00000339307 CAMSAP2Q08AD1 1489 aa30.74■■■□□ 2.51
ITGA4-202ENST00000339307 RTEL1-TNFRSF6BF6WH68 1400 aa30.73■■■□□ 2.51
ITGA4-202ENST00000339307 CCDC141Q6ZP82 1450 aa30.71■■■□□ 2.51
ITGA4-202ENST00000339307 RSPH4AQ5TD94 716 aa30.71■■■□□ 2.51
ITGA4-202ENST00000339307 NPATQ14207 1427 aa30.7■■■□□ 2.51
ITGA4-202ENST00000339307 LRRC9Q6ZRR7 1453 aa30.7■■■□□ 2.5
ITGA4-202ENST00000339307 DHX29Q7Z478 1369 aaKnown RBP30.68■■■□□ 2.5
ITGA4-202ENST00000339307 KIF3BO15066 747 aa30.68■■■□□ 2.5
ITGA4-202ENST00000339307 TSPY4P0CV99 314 aa30.68■■■□□ 2.5
ITGA4-202ENST00000339307 TSPY10P0CW01 314 aa30.68■■■□□ 2.5
ITGA4-202ENST00000339307 PPP6R1Q9UPN7 881 aa30.67■■■□□ 2.5
ITGA4-202ENST00000339307 KANK4Q5T7N3 995 aaPredicted RBP30.66■■■□□ 2.5
ITGA4-202ENST00000339307 APLP2Q06481 763 aa30.61■■■□□ 2.49
ITGA4-202ENST00000339307 PTPRTO14522 1441 aa30.61■■■□□ 2.49
ITGA4-202ENST00000339307 CAMSAP1Q5T5Y3 1602 aa30.6■■■□□ 2.49
ITGA4-202ENST00000339307 PTPRKQ15262 1439 aa30.6■■■□□ 2.49
ITGA4-202ENST00000339307 NCOA1Q15788 1441 aa30.59■■■□□ 2.49
ITGA4-202ENST00000339307 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
ITGA4-202ENST00000339307 WASHC2CQ9Y4E1 1318 aa30.56■■■□□ 2.48
ITGA4-202ENST00000339307 ARHGEF5Q12774 1597 aa30.56■■■□□ 2.48
ITGA4-202ENST00000339307 MYO3AQ8NEV4 1616 aa30.55■■■□□ 2.48
ITGA4-202ENST00000339307 MAP3K1Q13233 1512 aa30.54■■■□□ 2.48
ITGA4-202ENST00000339307 CEP170BQ9Y4F5 1589 aaPredicted RBP30.51■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms