RNA–Protein interactions for RNA: ENST00000339217.8

TCEA2-201, Transcript of transcription elongation factor A2, humanhuman

TSL 3

Gene TCEA2, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-201ENST00000339217 SCAPERQ9BY12 1400 aa42.24■■■■■ 4.35
TCEA2-201ENST00000339217 CDC42BPBQ9Y5S2 1711 aa42.23■■■■■ 4.35
TCEA2-201ENST00000339217 MAGI2Q86UL8 1455 aa42.22■■■■■ 4.35
TCEA2-201ENST00000339217 ARHGAP5Q13017 1502 aa42.21■■■■■ 4.35
TCEA2-201ENST00000339217 PREX2Q70Z35 1606 aa42.21■■■■■ 4.35
TCEA2-201ENST00000339217 CDC42BPAQ5VT25 1732 aa42.13■■■■■ 4.33
TCEA2-201ENST00000339217 ZFYVE16Q7Z3T8 1539 aa42.13■■■■■ 4.33
TCEA2-201ENST00000339217 ADAMTSL3P82987 1691 aa42.11■■■■■ 4.33
TCEA2-201ENST00000339217 LOC105371045A0A1W2PR82 267 aa42.09■■■■■ 4.33
TCEA2-201ENST00000339217 ZNF518AQ6AHZ1 1483 aa42.08■■■■■ 4.33
TCEA2-201ENST00000339217 BCORL1Q5H9F3 1711 aa42.07■■■■■ 4.33
TCEA2-201ENST00000339217 YEATS2Q9ULM3 1422 aa42.07■■■■■ 4.33
TCEA2-201ENST00000339217 KDM5CP41229 1560 aa42.06■■■■■ 4.32
TCEA2-201ENST00000339217 ABCC1P33527 1531 aa42.03■■■■■ 4.32
TCEA2-201ENST00000339217 GPATCH8Q9UKJ3 1502 aaKnown RBP42■■■■■ 4.31
TCEA2-201ENST00000339217 MTUS2Q5JR59 1369 aa41.99■■■■■ 4.31
TCEA2-201ENST00000339217 SIGLEC1Q9BZZ2 1709 aa41.97■■■■■ 4.31
TCEA2-201ENST00000339217 EHBP1L1Q8N3D4 1523 aa41.96■■■■■ 4.31
TCEA2-201ENST00000339217 ITSN2Q9NZM3 1697 aa41.96■■■■■ 4.31
TCEA2-201ENST00000339217 ARHGEF12Q9NZN5 1544 aa41.95■■■■■ 4.31
TCEA2-201ENST00000339217 ARID4BQ4LE39 1312 aaPredicted RBP41.93■■■■■ 4.3
TCEA2-201ENST00000339217 ATP10AO60312 1499 aa41.92■■■■■ 4.3
TCEA2-201ENST00000339217 AFAP1Q8N556 730 aa41.91■■■■■ 4.3
TCEA2-201ENST00000339217 VPS8Q8N3P4 1428 aa41.91■■■■■ 4.3
TCEA2-201ENST00000339217 HECW2Q9P2P5 1572 aa41.91■■■■■ 4.3
TCEA2-201ENST00000339217 SAMD9LQ8IVG5 1584 aa41.89■■■■■ 4.3
TCEA2-201ENST00000339217 MADDQ8WXG6 1647 aa41.89■■■■■ 4.3
TCEA2-201ENST00000339217 MLH3Q9UHC1 1453 aa41.89■■■■■ 4.3
TCEA2-201ENST00000339217 C9orf84Q5VXU9 1444 aa41.87■■■■■ 4.29
TCEA2-201ENST00000339217 TRAPPC8Q9Y2L5 1435 aa41.87■■■■■ 4.29
TCEA2-201ENST00000339217 PTPRMP28827 1452 aa41.87■■■■■ 4.29
TCEA2-201ENST00000339217 CCNB3Q8WWL7 1395 aa41.86■■■■■ 4.29
TCEA2-201ENST00000339217 TIAM1Q13009 1591 aa41.82■■■■■ 4.29
TCEA2-201ENST00000339217 DIP2CQ9Y2E4 1556 aa41.81■■■■■ 4.28
TCEA2-201ENST00000339217 REREQ9P2R6 1566 aa41.8■■■■■ 4.28
TCEA2-201ENST00000339217 KIAA1107Q9UPP5 1409 aa41.79■■■■■ 4.28
TCEA2-201ENST00000339217 PLEKHH2Q8IVE3 1493 aa41.78■■■■■ 4.28
TCEA2-201ENST00000339217 SYCP2Q9BX26 1530 aa41.77■■■■■ 4.28
TCEA2-201ENST00000339217 CFDP1Q9UEE9 299 aaPredicted RBP41.76■■■■■ 4.28
TCEA2-201ENST00000339217 ABCA6Q8N139 1617 aa41.76■■■■■ 4.28
TCEA2-201ENST00000339217 KIDINS220Q9ULH0 1771 aa41.73■■■■■ 4.27
TCEA2-201ENST00000339217 ZNF777Q9ULD5 760 aaPredicted RBP41.73■■■■■ 4.27
TCEA2-201ENST00000339217 RIMS1Q86UR5 1692 aaKnown RBP41.73■■■■■ 4.27
TCEA2-201ENST00000339217 SUPT6HQ7KZ85 1726 aaKnown RBP41.72■■■■■ 4.27
TCEA2-201ENST00000339217 MAP3K1Q13233 1512 aa41.71■■■■■ 4.27
TCEA2-201ENST00000339217 NCOA2Q15596 1464 aa41.67■■■■■ 4.26
TCEA2-201ENST00000339217 FER1L4A9Z1Z3 1794 aa41.65■■■■■ 4.26
TCEA2-201ENST00000339217 LRRC9Q6ZRR7 1453 aa41.64■■■■■ 4.26
TCEA2-201ENST00000339217 AGLP35573 1532 aa41.64■■■■■ 4.26
TCEA2-201ENST00000339217 HNRNPMP52272 730 aaKnown RBP eCLIP41.62■■■■■ 4.251e-6■■■■□ 22.9
TCEA2-201ENST00000339217 MYT1LQ9UL68 1186 aa41.62■■■■■ 4.25
TCEA2-201ENST00000339217 INO80Q9ULG1 1556 aaPredicted RBP41.59■■■■■ 4.25
TCEA2-201ENST00000339217 MBD5Q9P267 1494 aa41.57■■■■■ 4.25
TCEA2-201ENST00000339217 SPAG9O60271 1321 aaKnown RBP41.56■■■■■ 4.24
TCEA2-201ENST00000339217 MLECQ14165 292 aa41.56■■■■■ 4.24
TCEA2-201ENST00000339217 ATP7AQ04656 1500 aa41.55■■■■■ 4.24
TCEA2-201ENST00000339217 ZNF644Q9H582 1327 aaPredicted RBP41.53■■■■■ 4.24
TCEA2-201ENST00000339217 CAMSAP2Q08AD1 1489 aa41.45■■■■■ 4.23
TCEA2-201ENST00000339217 KANK4Q5T7N3 995 aaPredicted RBP41.44■■■■■ 4.22
TCEA2-201ENST00000339217 PLXNC1O60486 1568 aa41.44■■■■■ 4.22
TCEA2-201ENST00000339217 LMTK3Q96Q04 1460 aa41.42■■■■■ 4.22
TCEA2-201ENST00000339217 RTEL1-TNFRSF6BF6WH68 1400 aa41.41■■■■■ 4.22
TCEA2-201ENST00000339217 ADGBQ8N7X0 1667 aa41.37■■■■■ 4.21
TCEA2-201ENST00000339217 A2MP01023 1474 aa41.36■■■■■ 4.21
TCEA2-201ENST00000339217 CCDC141Q6ZP82 1450 aa41.36■■■■■ 4.21
TCEA2-201ENST00000339217 ARHGEF5Q12774 1597 aa41.35■■■■■ 4.21
TCEA2-201ENST00000339217 RSPH4AQ5TD94 716 aa41.35■■■■■ 4.21
TCEA2-201ENST00000339217 MIA2Q96PC5 1412 aa41.3■■■■■ 4.2
TCEA2-201ENST00000339217 MYOM3Q5VTT5 1437 aa41.29■■■■■ 4.2
TCEA2-201ENST00000339217 CNTLNQ9NXG0 1405 aa41.27■■■■■ 4.2
TCEA2-201ENST00000339217 APLP2Q06481 763 aa41.25■■■■■ 4.19
TCEA2-201ENST00000339217 C3P01024 1663 aa41.25■■■■■ 4.19
TCEA2-201ENST00000339217 PLPPR3Q6T4P5 718 aa41.24■■■■■ 4.19
TCEA2-201ENST00000339217 PREX1Q8TCU6 1659 aa41.22■■■■■ 4.19
TCEA2-201ENST00000339217 MROH2AA6NES4 1674 aa41.21■■■■■ 4.19
TCEA2-201ENST00000339217 CEBPAP49715 358 aaPredicted RBP41.21■■■■■ 4.19
TCEA2-201ENST00000339217 SETD1BQ9UPS6 1966 aaKnown RBP41.18■■■■■ 4.18
TCEA2-201ENST00000339217 DHX29Q7Z478 1369 aaKnown RBP41.18■■■■■ 4.18
TCEA2-201ENST00000339217 ESF1Q9H501 851 aaKnown RBP41.18■■■■■ 4.18
TCEA2-201ENST00000339217 MAST1Q9Y2H9 1570 aa41.15■■■■■ 4.18
TCEA2-201ENST00000339217 TSPY4P0CV99 314 aa41.1■■■■■ 4.17
TCEA2-201ENST00000339217 TSPY10P0CW01 314 aa41.1■■■■■ 4.17
TCEA2-201ENST00000339217 PPP6R1Q9UPN7 881 aa41.1■■■■■ 4.17
TCEA2-201ENST00000339217 CLTCQ00610 1675 aaKnown RBP41.07■■■■■ 4.16
TCEA2-201ENST00000339217 HSPA2P54652 639 aa41.05■■■■■ 4.16
TCEA2-201ENST00000339217 UHRF1BP1Q6BDS2 1440 aa41.04■■■■■ 4.16
TCEA2-201ENST00000339217 ZMYM3Q14202 1370 aa41.04■■■■■ 4.16
TCEA2-201ENST00000339217 NPATQ14207 1427 aa41.03■■■■■ 4.16
TCEA2-201ENST00000339217 PTPN23Q9H3S7 1636 aa41.03■■■■■ 4.16
TCEA2-201ENST00000339217 GGT6Q6P531 493 aa41.01■■■■■ 4.16
TCEA2-201ENST00000339217 FAM135AQ9P2D6 1515 aa41■■■■■ 4.15
TCEA2-201ENST00000339217 TCOF1Q13428 1488 aaKnown RBP40.99■■■■■ 4.15
TCEA2-201ENST00000339217 FGD6Q6ZV73 1430 aa40.99■■■■■ 4.15
TCEA2-201ENST00000339217 CROCC2H7BZ55 1655 aa40.95■■■■■ 4.15
TCEA2-201ENST00000339217 SHANK2Q9UPX8 1470 aa40.95■■■■■ 4.15
TCEA2-201ENST00000339217 KIF3BO15066 747 aa40.93■■■■■ 4.14
TCEA2-201ENST00000339217 ABCC5O15440 1437 aa40.9■■■■■ 4.14
TCEA2-201ENST00000339217 DNMT1P26358 1616 aaKnown RBP40.89■■■■■ 4.14
TCEA2-201ENST00000339217 EIF2AK4Q9P2K8 1649 aaKnown RBP40.89■■■■■ 4.14
TCEA2-201ENST00000339217 PTPRKQ15262 1439 aa40.89■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms