RNA–Protein interactions for RNA: ENST00000338784.8

TNFSF13-201, Transcript of TNF superfamily member 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,971 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-201ENST00000338784 NUP153P49790 1475 aaKnown RBP21.28■■□□□ 1
TNFSF13-201ENST00000338784 KDM5BQ9UGL1 1544 aa21.28■■□□□ 1
TNFSF13-201ENST00000338784 CCER2I3L3R5 266 aa21.27■■□□□ 1
TNFSF13-201ENST00000338784 CDK11AQ9UQ88 783 aaPredicted RBP21.27■■□□□ 1
TNFSF13-201ENST00000338784 DENND4BO75064 1496 aaPredicted RBP21.27■■□□□ 1
TNFSF13-201ENST00000338784 RAPGEF6Q8TEU7 1601 aa21.26■□□□□ 0.99
TNFSF13-201ENST00000338784 MPHOSPH9Q99550 1183 aa21.25■□□□□ 0.99
TNFSF13-201ENST00000338784 ROCK1Q13464 1354 aa21.25■□□□□ 0.99
TNFSF13-201ENST00000338784 KDM6BO15054 1643 aa21.24■□□□□ 0.99
TNFSF13-201ENST00000338784 DAPK1P53355 1430 aa21.24■□□□□ 0.99
TNFSF13-201ENST00000338784 MYT1Q01538 1121 aa21.21■□□□□ 0.99
TNFSF13-201ENST00000338784 ABCC5O15440 1437 aa21.2■□□□□ 0.98
TNFSF13-201ENST00000338784 CARMIL2Q6F5E8 1435 aa21.2■□□□□ 0.98
TNFSF13-201ENST00000338784 DNMT1P26358 1616 aaKnown RBP21.17■□□□□ 0.98
TNFSF13-201ENST00000338784 ZNF644Q9H582 1327 aaPredicted RBP21.17■□□□□ 0.98
TNFSF13-201ENST00000338784 TROQ12816 1431 aaPredicted RBP21.16■□□□□ 0.98
TNFSF13-201ENST00000338784 PRG4Q92954 1404 aaPredicted RBP21.13■□□□□ 0.97
TNFSF13-201ENST00000338784 JPH4Q96JJ6 628 aa21.13■□□□□ 0.97
TNFSF13-201ENST00000338784 HSPA5P11021 654 aaKnown RBP21.12■□□□□ 0.97
TNFSF13-201ENST00000338784 TRHP20396 242 aaPredicted RBP21.12■□□□□ 0.97
TNFSF13-201ENST00000338784 FOXD1Q16676 465 aa21.12■□□□□ 0.97
TNFSF13-201ENST00000338784 L3MBTL2Q969R5 705 aa21.12■□□□□ 0.97
TNFSF13-201ENST00000338784 PLB1Q6P1J6 1458 aa21.11■□□□□ 0.97
TNFSF13-201ENST00000338784 ANKRD30BQ9BXX2 1392 aa21.11■□□□□ 0.97
TNFSF13-201ENST00000338784 CLASP1Q7Z460 1538 aa21.1■□□□□ 0.97
TNFSF13-201ENST00000338784 EIF4G2P78344 907 aaKnown RBP eCLIP21.1■□□□□ 0.97
TNFSF13-201ENST00000338784 CFDP1Q9UEE9 299 aaPredicted RBP21.1■□□□□ 0.97
TNFSF13-201ENST00000338784 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.96
TNFSF13-201ENST00000338784 ABCA8O94911 1581 aa21.08■□□□□ 0.96
TNFSF13-201ENST00000338784 CAMSAP2Q08AD1 1489 aa21.07■□□□□ 0.96
TNFSF13-201ENST00000338784 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
TNFSF13-201ENST00000338784 SLC4A1APQ9BWU0 796 aaKnown RBP21.07■□□□□ 0.96
TNFSF13-201ENST00000338784 GPATCH8Q9UKJ3 1502 aaKnown RBP21.06■□□□□ 0.96
TNFSF13-201ENST00000338784 SHROOM2Q13796 1616 aa21.06■□□□□ 0.96
TNFSF13-201ENST00000338784 ADCY10Q96PN6 1610 aa21.05■□□□□ 0.96
TNFSF13-201ENST00000338784 ITSN2Q9NZM3 1697 aa21.04■□□□□ 0.96
TNFSF13-201ENST00000338784 NCOA1Q15788 1441 aa21.03■□□□□ 0.96
TNFSF13-201ENST00000338784 ZNF777Q9ULD5 760 aaPredicted RBP21.01■□□□□ 0.95
TNFSF13-201ENST00000338784 TEX14Q8IWB6 1497 aa21■□□□□ 0.95
TNFSF13-201ENST00000338784 KIF14Q15058 1648 aa21■□□□□ 0.95
TNFSF13-201ENST00000338784 ADGRL2O95490 1459 aa20.99■□□□□ 0.95
TNFSF13-201ENST00000338784 PLEKHD1A6NEE1 506 aa20.98■□□□□ 0.95
TNFSF13-201ENST00000338784 PZPP20742 1482 aa20.98■□□□□ 0.95
TNFSF13-201ENST00000338784 NBPF8Q3BBV2 869 aa20.97■□□□□ 0.95
TNFSF13-201ENST00000338784 FKBP8Q14318 412 aa20.97■□□□□ 0.95
TNFSF13-201ENST00000338784 ANKRD30AQ9BXX3 1397 aa20.96■□□□□ 0.95
TNFSF13-201ENST00000338784 ADGBQ8N7X0 1667 aa20.95■□□□□ 0.94
TNFSF13-201ENST00000338784 CNTLNQ9NXG0 1405 aa20.95■□□□□ 0.94
TNFSF13-201ENST00000338784 NEFLP07196 543 aa20.94■□□□□ 0.94
TNFSF13-201ENST00000338784 CCDC7Q96M83 1385 aa20.93■□□□□ 0.94
TNFSF13-201ENST00000338784 ATP10BO94823 1461 aa20.92■□□□□ 0.94
TNFSF13-201ENST00000338784 KIAA1107Q9UPP5 1409 aa20.92■□□□□ 0.94
TNFSF13-201ENST00000338784 CROCC2H7BZ55 1655 aa20.91■□□□□ 0.94
TNFSF13-201ENST00000338784 C11orf95C9JLR9 678 aaPredicted RBP20.91■□□□□ 0.94
TNFSF13-201ENST00000338784 PTPRGP23470 1445 aa20.91■□□□□ 0.94
TNFSF13-201ENST00000338784 ABCC10Q5T3U5 1492 aa20.9■□□□□ 0.94
TNFSF13-201ENST00000338784 SPATA31E1Q6ZUB1 1445 aa20.9■□□□□ 0.94
TNFSF13-201ENST00000338784 ANKRD50Q9ULJ7 1429 aa20.9■□□□□ 0.94
TNFSF13-201ENST00000338784 BCANQ96GW7 911 aa20.89■□□□□ 0.93
TNFSF13-201ENST00000338784 SHANK2Q9UPX8 1470 aa20.88■□□□□ 0.93
TNFSF13-201ENST00000338784 HNRNPUQ00839 825 aaKnown RBP eCLIP20.87■□□□□ 0.93
TNFSF13-201ENST00000338784 PKD2Q13563 968 aa20.87■□□□□ 0.93
TNFSF13-201ENST00000338784 TSHZ2Q9NRE2 1034 aa20.85■□□□□ 0.93
TNFSF13-201ENST00000338784 C9orf84Q5VXU9 1444 aa20.85■□□□□ 0.93
TNFSF13-201ENST00000338784 TSPY4P0CV99 314 aa20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 TSPY10P0CW01 314 aa20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 CDC42BPAQ5VT25 1732 aa20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 MBD5Q9P267 1494 aa20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 KIF7Q2M1P5 1343 aa20.84■□□□□ 0.93
TNFSF13-201ENST00000338784 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
TNFSF13-201ENST00000338784 NUP155O75694 1391 aa20.81■□□□□ 0.92
TNFSF13-201ENST00000338784 DAXXQ9UER7 740 aaPredicted RBP20.8■□□□□ 0.92
TNFSF13-201ENST00000338784 ABCC2Q92887 1545 aa20.79■□□□□ 0.92
TNFSF13-201ENST00000338784 CCDC184Q52MB2 194 aa20.77■□□□□ 0.92
TNFSF13-201ENST00000338784 HNRNPMP52272 730 aaKnown RBP eCLIP20.76■□□□□ 0.91
TNFSF13-201ENST00000338784 KIF15Q9NS87 1388 aa20.75■□□□□ 0.91
TNFSF13-201ENST00000338784 KDM5DQ9BY66 1539 aa20.75■□□□□ 0.91
TNFSF13-201ENST00000338784 ARHGEF5Q12774 1597 aa20.75■□□□□ 0.91
TNFSF13-201ENST00000338784 ZNF326Q5BKZ1 582 aaKnown RBP20.75■□□□□ 0.91
TNFSF13-201ENST00000338784 USP47Q96K76 1375 aa20.75■□□□□ 0.91
TNFSF13-201ENST00000338784 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
TNFSF13-201ENST00000338784 POLR1AO95602 1720 aaPredicted RBP20.73■□□□□ 0.91
TNFSF13-201ENST00000338784 UHRF1BP1Q6BDS2 1440 aa20.72■□□□□ 0.91
TNFSF13-201ENST00000338784 RSPH4AQ5TD94 716 aa20.72■□□□□ 0.91
TNFSF13-201ENST00000338784 PREX2Q70Z35 1606 aa20.72■□□□□ 0.91
TNFSF13-201ENST00000338784 UHRF1BP1LA0JNW5 1464 aa20.71■□□□□ 0.91
TNFSF13-201ENST00000338784 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
TNFSF13-201ENST00000338784 CCDC141Q6ZP82 1450 aa20.7■□□□□ 0.9
TNFSF13-201ENST00000338784 FAM9BQ8IZU0 186 aa20.7■□□□□ 0.9
TNFSF13-201ENST00000338784 ARHGEF12Q9NZN5 1544 aa20.69■□□□□ 0.9
TNFSF13-201ENST00000338784 RALGAPBQ86X10 1494 aa20.68■□□□□ 0.9
TNFSF13-201ENST00000338784 SAMD9LQ8IVG5 1584 aa20.67■□□□□ 0.9
TNFSF13-201ENST00000338784 KDM5CP41229 1560 aa20.66■□□□□ 0.9
TNFSF13-201ENST00000338784 CDC42BPBQ9Y5S2 1711 aa20.66■□□□□ 0.9
TNFSF13-201ENST00000338784 DHX29Q7Z478 1369 aaKnown RBP20.65■□□□□ 0.9
TNFSF13-201ENST00000338784 PRKCSHP14314 528 aaPredicted RBP20.65■□□□□ 0.9
TNFSF13-201ENST00000338784 ZCCHC11Q5TAX3 1644 aaKnown RBP20.65■□□□□ 0.9
TNFSF13-201ENST00000338784 CARD11Q9BXL7 1154 aa20.65■□□□□ 0.9
TNFSF13-201ENST00000338784 ZBED9Q6R2W3 1325 aa20.64■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms