RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 POGZQ7Z3K3 1410 aa18.1■□□□□ 0.49
MRPL55-203ENST00000336520 MTUS2Q5JR59 1369 aa18.1■□□□□ 0.49
MRPL55-203ENST00000336520 ZMYM4Q5VZL5 1548 aa18.09■□□□□ 0.49
MRPL55-203ENST00000336520 ARHGEF40Q8TER5 1519 aa18.09■□□□□ 0.49
MRPL55-203ENST00000336520 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
MRPL55-203ENST00000336520 CDC42BPBQ9Y5S2 1711 aa18.07■□□□□ 0.48
MRPL55-203ENST00000336520 ARID4BQ4LE39 1312 aaPredicted RBP18.06■□□□□ 0.48
MRPL55-203ENST00000336520 ZFYVE16Q7Z3T8 1539 aa18.06■□□□□ 0.48
MRPL55-203ENST00000336520 CDC42BPAQ5VT25 1732 aa18.05■□□□□ 0.48
MRPL55-203ENST00000336520 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
MRPL55-203ENST00000336520 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
MRPL55-203ENST00000336520 ZNF518AQ6AHZ1 1483 aa18.04■□□□□ 0.48
MRPL55-203ENST00000336520 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
MRPL55-203ENST00000336520 YEATS2Q9ULM3 1422 aa18.03■□□□□ 0.48
MRPL55-203ENST00000336520 CCNB3Q8WWL7 1395 aa18.03■□□□□ 0.48
MRPL55-203ENST00000336520 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-203ENST00000336520 GPATCH8Q9UKJ3 1502 aaKnown RBP18.02■□□□□ 0.47
MRPL55-203ENST00000336520 ABCC1P33527 1531 aa18.01■□□□□ 0.47
MRPL55-203ENST00000336520 AFAP1Q8N556 730 aa18■□□□□ 0.47
MRPL55-203ENST00000336520 MYT1LQ9UL68 1186 aa18■□□□□ 0.47
MRPL55-203ENST00000336520 CFDP1Q9UEE9 299 aaPredicted RBP17.98■□□□□ 0.47
MRPL55-203ENST00000336520 KDM5CP41229 1560 aa17.98■□□□□ 0.47
MRPL55-203ENST00000336520 TIAM1Q13009 1591 aa17.98■□□□□ 0.47
MRPL55-203ENST00000336520 ITSN2Q9NZM3 1697 aa17.98■□□□□ 0.47
MRPL55-203ENST00000336520 BCORL1Q5H9F3 1711 aa17.97■□□□□ 0.47
MRPL55-203ENST00000336520 ARHGEF12Q9NZN5 1544 aa17.97■□□□□ 0.47
MRPL55-203ENST00000336520 TRAPPC8Q9Y2L5 1435 aa17.97■□□□□ 0.47
MRPL55-203ENST00000336520 ADAMTSL3P82987 1691 aa17.96■□□□□ 0.47
MRPL55-203ENST00000336520 HECW2Q9P2P5 1572 aa17.96■□□□□ 0.47
MRPL55-203ENST00000336520 SAMD9LQ8IVG5 1584 aa17.96■□□□□ 0.46
MRPL55-203ENST00000336520 ATP10AO60312 1499 aa17.95■□□□□ 0.46
MRPL55-203ENST00000336520 C9orf84Q5VXU9 1444 aa17.95■□□□□ 0.46
MRPL55-203ENST00000336520 SYCP2Q9BX26 1530 aa17.94■□□□□ 0.46
MRPL55-203ENST00000336520 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
MRPL55-203ENST00000336520 SUPT6HQ7KZ85 1726 aaKnown RBP17.93■□□□□ 0.46
MRPL55-203ENST00000336520 MADDQ8WXG6 1647 aa17.93■□□□□ 0.46
MRPL55-203ENST00000336520 NCOA2Q15596 1464 aa17.92■□□□□ 0.46
MRPL55-203ENST00000336520 MLH3Q9UHC1 1453 aa17.92■□□□□ 0.46
MRPL55-203ENST00000336520 SIGLEC1Q9BZZ2 1709 aa17.92■□□□□ 0.46
MRPL55-203ENST00000336520 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
MRPL55-203ENST00000336520 MLECQ14165 292 aa17.91■□□□□ 0.46
MRPL55-203ENST00000336520 KIAA1107Q9UPP5 1409 aa17.9■□□□□ 0.46
MRPL55-203ENST00000336520 PTPRMP28827 1452 aa17.9■□□□□ 0.46
MRPL55-203ENST00000336520 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
MRPL55-203ENST00000336520 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
MRPL55-203ENST00000336520 ABCA6Q8N139 1617 aa17.89■□□□□ 0.45
MRPL55-203ENST00000336520 MAP3K1Q13233 1512 aa17.88■□□□□ 0.45
MRPL55-203ENST00000336520 APLP2Q06481 763 aa17.88■□□□□ 0.45
MRPL55-203ENST00000336520 SPAG9O60271 1321 aaKnown RBP17.88■□□□□ 0.45
MRPL55-203ENST00000336520 RIMS1Q86UR5 1692 aaKnown RBP17.87■□□□□ 0.45
MRPL55-203ENST00000336520 ZNF644Q9H582 1327 aaPredicted RBP17.87■□□□□ 0.45
MRPL55-203ENST00000336520 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
MRPL55-203ENST00000336520 KANK4Q5T7N3 995 aaPredicted RBP17.85■□□□□ 0.45
MRPL55-203ENST00000336520 REREQ9P2R6 1566 aa17.84■□□□□ 0.45
MRPL55-203ENST00000336520 ATP7AQ04656 1500 aa17.83■□□□□ 0.45
MRPL55-203ENST00000336520 PLPPR3Q6T4P5 718 aa17.83■□□□□ 0.44
MRPL55-203ENST00000336520 FER1L4A9Z1Z3 1794 aa17.83■□□□□ 0.44
MRPL55-203ENST00000336520 CAMSAP2Q08AD1 1489 aa17.82■□□□□ 0.44
MRPL55-203ENST00000336520 INO80Q9ULG1 1556 aaPredicted RBP17.81■□□□□ 0.44
MRPL55-203ENST00000336520 MBD5Q9P267 1494 aa17.8■□□□□ 0.44
MRPL55-203ENST00000336520 AGLP35573 1532 aa17.79■□□□□ 0.44
MRPL55-203ENST00000336520 CCDC141Q6ZP82 1450 aa17.77■□□□□ 0.44
MRPL55-203ENST00000336520 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
MRPL55-203ENST00000336520 ESF1Q9H501 851 aaKnown RBP17.76■□□□□ 0.43
MRPL55-203ENST00000336520 A2MP01023 1474 aa17.75■□□□□ 0.43
MRPL55-203ENST00000336520 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
MRPL55-203ENST00000336520 RTEL1-TNFRSF6BF6WH68 1400 aa17.73■□□□□ 0.43
MRPL55-203ENST00000336520 MIA2Q96PC5 1412 aa17.72■□□□□ 0.43
MRPL55-203ENST00000336520 ADGBQ8N7X0 1667 aa17.72■□□□□ 0.43
MRPL55-203ENST00000336520 ARHGEF5Q12774 1597 aa17.72■□□□□ 0.43
MRPL55-203ENST00000336520 PLXNC1O60486 1568 aa17.71■□□□□ 0.43
MRPL55-203ENST00000336520 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
MRPL55-203ENST00000336520 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
MRPL55-203ENST00000336520 CEBPAP49715 358 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-203ENST00000336520 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
MRPL55-203ENST00000336520 CNTLNQ9NXG0 1405 aa17.68■□□□□ 0.42
MRPL55-203ENST00000336520 GGT6Q6P531 493 aa17.66■□□□□ 0.42
MRPL55-203ENST00000336520 DHX29Q7Z478 1369 aaKnown RBP17.66■□□□□ 0.42
MRPL55-203ENST00000336520 C3P01024 1663 aa17.64■□□□□ 0.42
MRPL55-203ENST00000336520 PTPN23Q9H3S7 1636 aa17.64■□□□□ 0.41
MRPL55-203ENST00000336520 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
MRPL55-203ENST00000336520 MAST1Q9Y2H9 1570 aa17.62■□□□□ 0.41
MRPL55-203ENST00000336520 HSPA2P54652 639 aa17.62■□□□□ 0.41
MRPL55-203ENST00000336520 PREX1Q8TCU6 1659 aa17.61■□□□□ 0.41
MRPL55-203ENST00000336520 KIF3BO15066 747 aa17.61■□□□□ 0.41
MRPL55-203ENST00000336520 MROH2AA6NES4 1674 aa17.61■□□□□ 0.41
MRPL55-203ENST00000336520 CLTCQ00610 1675 aaKnown RBP17.6■□□□□ 0.41
MRPL55-203ENST00000336520 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
MRPL55-203ENST00000336520 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
MRPL55-203ENST00000336520 TCOF1Q13428 1488 aaKnown RBP17.58■□□□□ 0.41
MRPL55-203ENST00000336520 ZMYM3Q14202 1370 aa17.58■□□□□ 0.4
MRPL55-203ENST00000336520 SHANK2Q9UPX8 1470 aa17.57■□□□□ 0.4
MRPL55-203ENST00000336520 SETD1BQ9UPS6 1966 aaKnown RBP17.57■□□□□ 0.4
MRPL55-203ENST00000336520 CROCC2H7BZ55 1655 aa17.57■□□□□ 0.4
MRPL55-203ENST00000336520 ABCC5O15440 1437 aa17.56■□□□□ 0.4
MRPL55-203ENST00000336520 DAPK1P53355 1430 aa17.55■□□□□ 0.4
MRPL55-203ENST00000336520 NPATQ14207 1427 aa17.55■□□□□ 0.4
MRPL55-203ENST00000336520 DNMT1P26358 1616 aaKnown RBP17.55■□□□□ 0.4
MRPL55-203ENST00000336520 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
MRPL55-203ENST00000336520 KIF15Q9NS87 1388 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms