RNA–Protein interactions for RNA: ENST00000335647.9

KATNA1-202, Transcript of katanin catalytic subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KATNA1, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-202ENST00000335647 OCEL1Q9H607 264 aa7.8□□□□□ -1.16
KATNA1-202ENST00000335647 METRNQ9UJH8 293 aa7.79□□□□□ -1.16
KATNA1-202ENST00000335647 COLQQ9Y215 455 aaPredicted RBP7.79□□□□□ -1.16
KATNA1-202ENST00000335647 ZCCHC6Q5VYS8 1495 aaKnown RBP7.79□□□□□ -1.16
KATNA1-202ENST00000335647 RIMBP3CA6NJZ7 1639 aa7.79□□□□□ -1.16
KATNA1-202ENST00000335647 RIMBP3BA6NNM3 1639 aa7.79□□□□□ -1.16
KATNA1-202ENST00000335647 RIMBP3Q9UFD9 1639 aa7.79□□□□□ -1.16
KATNA1-202ENST00000335647 POTEFA5A3E0 1075 aa7.78□□□□□ -1.16
KATNA1-202ENST00000335647 PPP1R37O75864 691 aa7.78□□□□□ -1.16
KATNA1-202ENST00000335647 PLCG2P16885 1265 aa7.78□□□□□ -1.16
KATNA1-202ENST00000335647 PDS5BQ9NTI5 1447 aa7.78□□□□□ -1.16
KATNA1-202ENST00000335647 SEC24BO95487 1268 aa7.77□□□□□ -1.17
KATNA1-202ENST00000335647 LAMC3Q9Y6N6 1575 aa7.77□□□□□ -1.17
KATNA1-202ENST00000335647 DPY19L2Q6NUT2 758 aa7.76□□□□□ -1.17
KATNA1-202ENST00000335647 PCDH10Q9P2E7 1040 aa7.76□□□□□ -1.17
KATNA1-202ENST00000335647 KIF21AQ7Z4S6 1674 aa7.75□□□□□ -1.17
KATNA1-202ENST00000335647 SLC24A1O60721 1099 aa7.75□□□□□ -1.17
KATNA1-202ENST00000335647 HAP1P54257 671 aaPredicted RBP7.74□□□□□ -1.17
KATNA1-202ENST00000335647 TSHZ2Q9NRE2 1034 aa7.73□□□□□ -1.17
KATNA1-202ENST00000335647 HMGXB3Q12766 1538 aa7.73□□□□□ -1.17
KATNA1-202ENST00000335647 ATAD2BQ9ULI0 1458 aa7.73□□□□□ -1.17
KATNA1-202ENST00000335647 CYB5RLQ6IPT4 315 aa7.73□□□□□ -1.17
KATNA1-202ENST00000335647 POTEMA6NI47 508 aa7.72□□□□□ -1.17
KATNA1-202ENST00000335647 MRC2Q9UBG0 1479 aa7.72□□□□□ -1.17
KATNA1-202ENST00000335647 ARHGEF11O15085 1522 aa7.71□□□□□ -1.18
KATNA1-202ENST00000335647 L3MBTL3Q96JM7 780 aaPredicted RBP7.7□□□□□ -1.18
KATNA1-202ENST00000335647 TMEM121BQ9BXQ6 578 aaPredicted RBP7.7□□□□□ -1.18
KATNA1-202ENST00000335647 BOLA1Q9Y3E2 137 aa7.7□□□□□ -1.18
KATNA1-202ENST00000335647 MICALL2Q8IY33 904 aa7.7□□□□□ -1.18
KATNA1-202ENST00000335647 WDR62O43379 1518 aa7.68□□□□□ -1.18
KATNA1-202ENST00000335647 CADPS2Q86UW7 1296 aa7.68□□□□□ -1.18
KATNA1-202ENST00000335647 BAZ1BQ9UIG0 1483 aaKnown RBP7.66□□□□□ -1.18
KATNA1-202ENST00000335647 G3V3G9 751 aa7.66□□□□□ -1.18
KATNA1-202ENST00000335647 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
KATNA1-202ENST00000335647 POTEB2H3BUK9 544 aa7.65□□□□□ -1.18
KATNA1-202ENST00000335647 POTEGQ6S5H5 508 aa7.65□□□□□ -1.18
KATNA1-202ENST00000335647 POTEJP0CG39 1038 aa7.64□□□□□ -1.19
KATNA1-202ENST00000335647 KDM2AQ9Y2K7 1162 aa7.63□□□□□ -1.19
KATNA1-202ENST00000335647 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
KATNA1-202ENST00000335647 CRISPLD2Q9H0B8 497 aa7.62□□□□□ -1.19
KATNA1-202ENST00000335647 C3orf67Q6ZVT6 689 aa7.6□□□□□ -1.19
KATNA1-202ENST00000335647 PDE4AP27815 886 aa7.6□□□□□ -1.19
KATNA1-202ENST00000335647 CADPSQ9ULU8 1353 aa7.59□□□□□ -1.19
KATNA1-202ENST00000335647 TMEM92Q6UXU6 159 aa7.59□□□□□ -1.19
KATNA1-202ENST00000335647 GPHNQ9NQX3 736 aaPredicted RBP7.59□□□□□ -1.19
KATNA1-202ENST00000335647 KIF3CO14782 793 aa7.58□□□□□ -1.2
KATNA1-202ENST00000335647 ARAP1Q96P48 1450 aa7.58□□□□□ -1.2
KATNA1-202ENST00000335647 CEP164Q9UPV0 1460 aa7.58□□□□□ -1.2
KATNA1-202ENST00000335647 SMARCA4P51532 1647 aa7.58□□□□□ -1.2
KATNA1-202ENST00000335647 MFSD10Q14728 455 aa7.57□□□□□ -1.2
KATNA1-202ENST00000335647 MAMSTRQ6ZN01 415 aa7.57□□□□□ -1.2
KATNA1-202ENST00000335647 LARP6Q9BRS8 491 aaKnown RBP7.57□□□□□ -1.2
KATNA1-202ENST00000335647 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
KATNA1-202ENST00000335647 TMC2Q8TDI7 906 aa7.57□□□□□ -1.2
KATNA1-202ENST00000335647 C2orf72A6NCS6 295 aa7.56□□□□□ -1.2
KATNA1-202ENST00000335647 DDX27Q96GQ7 796 aaKnown RBP7.55□□□□□ -1.2
KATNA1-202ENST00000335647 SCUBE2Q9NQ36 999 aa7.55□□□□□ -1.2
KATNA1-202ENST00000335647 FOXK1P85037 733 aa7.54□□□□□ -1.2
KATNA1-202ENST00000335647 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
KATNA1-202ENST00000335647 DSG2Q14126 1118 aa7.54□□□□□ -1.2
KATNA1-202ENST00000335647 PPP1R15BQ5SWA1 713 aa7.53□□□□□ -1.2
KATNA1-202ENST00000335647 RSF1Q96T23 1441 aaPredicted RBP7.52□□□□□ -1.21
KATNA1-202ENST00000335647 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
KATNA1-202ENST00000335647 SLAIN1Q8ND83 568 aa7.51□□□□□ -1.21
KATNA1-202ENST00000335647 FANCD2Q9BXW9 1451 aa7.5□□□□□ -1.21
KATNA1-202ENST00000335647 PEG3Q9GZU2 1588 aa7.5□□□□□ -1.21
KATNA1-202ENST00000335647 PLPP6Q8IY26 295 aa7.5□□□□□ -1.21
KATNA1-202ENST00000335647 CAMK2BQ13554 666 aa7.49□□□□□ -1.21
KATNA1-202ENST00000335647 E2F4Q16254 413 aa7.48□□□□□ -1.21
KATNA1-202ENST00000335647 P3H3Q8IVL6 736 aa7.47□□□□□ -1.21
KATNA1-202ENST00000335647 KCNV2Q8TDN2 545 aa7.47□□□□□ -1.21
KATNA1-202ENST00000335647 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
KATNA1-202ENST00000335647 EMILIN3Q9NT22 766 aa7.44□□□□□ -1.22
KATNA1-202ENST00000335647 URB2Q14146 1524 aaKnown RBP7.44□□□□□ -1.22
KATNA1-202ENST00000335647 CHD1O14646 1710 aa7.44□□□□□ -1.22
KATNA1-202ENST00000335647 MYT1Q01538 1121 aa7.44□□□□□ -1.22
KATNA1-202ENST00000335647 ARIH1Q9Y4X5 557 aaPredicted RBP7.44□□□□□ -1.22
KATNA1-202ENST00000335647 ZNF608Q9ULD9 1512 aaPredicted RBP7.43□□□□□ -1.22
KATNA1-202ENST00000335647 SLC34A2O95436 690 aa7.43□□□□□ -1.22
KATNA1-202ENST00000335647 ARHGEF1Q92888 912 aaKnown RBP7.43□□□□□ -1.22
KATNA1-202ENST00000335647 HOXB3P14651 431 aaPredicted RBP7.42□□□□□ -1.22
KATNA1-202ENST00000335647 OXER1Q8TDS5 423 aa7.41□□□□□ -1.22
KATNA1-202ENST00000335647 FBXO41Q8TF61 875 aa7.41□□□□□ -1.22
KATNA1-202ENST00000335647 PTCD2Q8WV60 388 aaKnown RBP7.41□□□□□ -1.22
KATNA1-202ENST00000335647 DOK7Q18PE1 504 aa7.4□□□□□ -1.23
KATNA1-202ENST00000335647 KDM4FA0A1W2PPD8 638 aa7.39□□□□□ -1.23
KATNA1-202ENST00000335647 SNPHO15079 494 aa7.39□□□□□ -1.23
KATNA1-202ENST00000335647 DPYSL4O14531 572 aa7.38□□□□□ -1.23
KATNA1-202ENST00000335647 UPF1Q92900 1129 aaKnown RBP eCLIP7.38□□□□□ -1.23
KATNA1-202ENST00000335647 ERCC6L2Q5T890 1561 aa7.38□□□□□ -1.23
KATNA1-202ENST00000335647 EIF4G3O43432 1585 aaKnown RBP7.38□□□□□ -1.23
KATNA1-202ENST00000335647 CFTRP13569 1480 aa7.37□□□□□ -1.23
KATNA1-202ENST00000335647 LMTK3Q96Q04 1460 aa7.37□□□□□ -1.23
KATNA1-202ENST00000335647 PCDHGA4Q9Y5G9 962 aa7.37□□□□□ -1.23
KATNA1-202ENST00000335647 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
KATNA1-202ENST00000335647 RIMBP2O15034 1052 aa7.36□□□□□ -1.23
KATNA1-202ENST00000335647 MAP3K9P80192 1104 aa7.36□□□□□ -1.23
KATNA1-202ENST00000335647 ZSWIM6Q9HCJ5 1215 aa7.36□□□□□ -1.23
KATNA1-202ENST00000335647 TBC1D12O60347 775 aa7.35□□□□□ -1.23
KATNA1-202ENST00000335647 PDIA6Q15084 440 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms