RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 PLEKHD1A6NEE1 506 aa10.68□□□□□ -0.7
USP16-201ENST00000334352 CHIC1Q5VXU3 224 aa10.68□□□□□ -0.7
USP16-201ENST00000334352 ZNF518AQ6AHZ1 1483 aa10.67□□□□□ -0.7
USP16-201ENST00000334352 SIGLEC1Q9BZZ2 1709 aa10.67□□□□□ -0.7
USP16-201ENST00000334352 CDK13Q14004 1512 aaKnown RBP10.67□□□□□ -0.7
USP16-201ENST00000334352 PTPRMP28827 1452 aa10.66□□□□□ -0.7
USP16-201ENST00000334352 MADDQ8WXG6 1647 aa10.66□□□□□ -0.7
USP16-201ENST00000334352 C9orf84Q5VXU9 1444 aa10.66□□□□□ -0.7
USP16-201ENST00000334352 ATP10AO60312 1499 aa10.66□□□□□ -0.7
USP16-201ENST00000334352 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
USP16-201ENST00000334352 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
USP16-201ENST00000334352 DIP2CQ9Y2E4 1556 aa10.65□□□□□ -0.7
USP16-201ENST00000334352 FER1L4A9Z1Z3 1794 aa10.65□□□□□ -0.7
USP16-201ENST00000334352 KIAA1107Q9UPP5 1409 aa10.65□□□□□ -0.71
USP16-201ENST00000334352 CDK11AQ9UQ88 783 aaPredicted RBP10.64□□□□□ -0.71
USP16-201ENST00000334352 PREX1Q8TCU6 1659 aa10.64□□□□□ -0.71
USP16-201ENST00000334352 INO80Q9ULG1 1556 aaPredicted RBP10.63□□□□□ -0.71
USP16-201ENST00000334352 PLXNC1O60486 1568 aa10.63□□□□□ -0.71
USP16-201ENST00000334352 RIMS1Q86UR5 1692 aaKnown RBP10.61□□□□□ -0.71
USP16-201ENST00000334352 ABCA6Q8N139 1617 aa10.61□□□□□ -0.71
USP16-201ENST00000334352 KIDINS220Q9ULH0 1771 aa10.61□□□□□ -0.71
USP16-201ENST00000334352 EHBP1L1Q8N3D4 1523 aa10.61□□□□□ -0.71
USP16-201ENST00000334352 ADGBQ8N7X0 1667 aa10.61□□□□□ -0.71
USP16-201ENST00000334352 SAMD9LQ8IVG5 1584 aa10.59□□□□□ -0.71
USP16-201ENST00000334352 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
USP16-201ENST00000334352 EFCAB2Q5VUJ9 269 aa10.58□□□□□ -0.72
USP16-201ENST00000334352 SCAPERQ9BY12 1400 aa10.58□□□□□ -0.72
USP16-201ENST00000334352 ZNF142P52746 1687 aaPredicted RBP10.58□□□□□ -0.72
USP16-201ENST00000334352 KCNH8Q96L42 1107 aa10.58□□□□□ -0.72
USP16-201ENST00000334352 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 CNTLNQ9NXG0 1405 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 MAST1Q9Y2H9 1570 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 RTEL1-TNFRSF6BF6WH68 1400 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 ARHGEF5Q12774 1597 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 ARHGAP5Q13017 1502 aa10.57□□□□□ -0.72
USP16-201ENST00000334352 GPATCH8Q9UKJ3 1502 aaKnown RBP10.56□□□□□ -0.72
USP16-201ENST00000334352 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
USP16-201ENST00000334352 NPATQ14207 1427 aa10.55□□□□□ -0.72
USP16-201ENST00000334352 TIAM1Q13009 1591 aa10.54□□□□□ -0.72
USP16-201ENST00000334352 PPP6R1Q9UPN7 881 aa10.54□□□□□ -0.72
USP16-201ENST00000334352 YEATS2Q9ULM3 1422 aa10.54□□□□□ -0.72
USP16-201ENST00000334352 C3P01024 1663 aa10.54□□□□□ -0.72
USP16-201ENST00000334352 P3H3Q8IVL6 736 aa10.53□□□□□ -0.72
USP16-201ENST00000334352 SUPT6HQ7KZ85 1726 aaKnown RBP10.52□□□□□ -0.72
USP16-201ENST00000334352 EIF2AK4Q9P2K8 1649 aaKnown RBP10.52□□□□□ -0.73
USP16-201ENST00000334352 TTBK1Q5TCY1 1321 aaPredicted RBP10.52□□□□□ -0.73
USP16-201ENST00000334352 ATP7AQ04656 1500 aa10.51□□□□□ -0.73
USP16-201ENST00000334352 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
USP16-201ENST00000334352 SETD1BQ9UPS6 1966 aaKnown RBP10.5□□□□□ -0.73
USP16-201ENST00000334352 RNF17Q9BXT8 1623 aaKnown RBP10.5□□□□□ -0.73
USP16-201ENST00000334352 PTPRTO14522 1441 aa10.5□□□□□ -0.73
USP16-201ENST00000334352 RAPGEF3O95398 923 aa10.5□□□□□ -0.73
USP16-201ENST00000334352 MBD5Q9P267 1494 aa10.49□□□□□ -0.73
USP16-201ENST00000334352 STRCQ7RTU9 1775 aa10.48□□□□□ -0.73
USP16-201ENST00000334352 KDM5DQ9BY66 1539 aa10.48□□□□□ -0.73
USP16-201ENST00000334352 TRAPPC8Q9Y2L5 1435 aa10.47□□□□□ -0.73
USP16-201ENST00000334352 SYCP2Q9BX26 1530 aa10.47□□□□□ -0.73
USP16-201ENST00000334352 UBTFP17480 764 aaKnown RBP10.47□□□□□ -0.73
USP16-201ENST00000334352 RSPH4AQ5TD94 716 aa10.47□□□□□ -0.73
USP16-201ENST00000334352 PLA2R1Q13018 1463 aa10.46□□□□□ -0.73
USP16-201ENST00000334352 CROCC2H7BZ55 1655 aa10.45□□□□□ -0.74
USP16-201ENST00000334352 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
USP16-201ENST00000334352 KDM5AP29375 1690 aaKnown RBP10.44□□□□□ -0.74
USP16-201ENST00000334352 SHANK2Q9UPX8 1470 aa10.43□□□□□ -0.74
USP16-201ENST00000334352 A2MP01023 1474 aa10.43□□□□□ -0.74
USP16-201ENST00000334352 MYO3AQ8NEV4 1616 aa10.43□□□□□ -0.74
USP16-201ENST00000334352 VPS8Q8N3P4 1428 aa10.42□□□□□ -0.74
USP16-201ENST00000334352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
USP16-201ENST00000334352 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
USP16-201ENST00000334352 CCDC141Q6ZP82 1450 aa10.42□□□□□ -0.74
USP16-201ENST00000334352 DEPDC5O75140 1603 aa10.41□□□□□ -0.74
USP16-201ENST00000334352 CLTCQ00610 1675 aaKnown RBP10.4□□□□□ -0.74
USP16-201ENST00000334352 CCNB3Q8WWL7 1395 aa10.4□□□□□ -0.74
USP16-201ENST00000334352 TCOF1Q13428 1488 aaKnown RBP10.4□□□□□ -0.74
USP16-201ENST00000334352 LRRC9Q6ZRR7 1453 aa10.4□□□□□ -0.74
USP16-201ENST00000334352 CAMSAP2Q08AD1 1489 aa10.4□□□□□ -0.74
USP16-201ENST00000334352 NCOA2Q15596 1464 aa10.39□□□□□ -0.75
USP16-201ENST00000334352 UHRF1BP1Q6BDS2 1440 aa10.39□□□□□ -0.75
USP16-201ENST00000334352 NCOA1Q15788 1441 aa10.39□□□□□ -0.75
USP16-201ENST00000334352 PTPRKQ15262 1439 aa10.39□□□□□ -0.75
USP16-201ENST00000334352 DHX29Q7Z478 1369 aaKnown RBP10.38□□□□□ -0.75
USP16-201ENST00000334352 LTBP4Q8N2S1 1624 aa10.37□□□□□ -0.75
USP16-201ENST00000334352 DMRT2Q9Y5R5 561 aa10.37□□□□□ -0.75
USP16-201ENST00000334352 POLR1AO95602 1720 aaPredicted RBP10.37□□□□□ -0.75
USP16-201ENST00000334352 PZPP20742 1482 aa10.37□□□□□ -0.75
USP16-201ENST00000334352 FBXO41Q8TF61 875 aa10.37□□□□□ -0.75
USP16-201ENST00000334352 LMTK2Q8IWU2 1503 aa10.36□□□□□ -0.75
USP16-201ENST00000334352 SPATA31D1Q6ZQQ2 1576 aa10.36□□□□□ -0.75
USP16-201ENST00000334352 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
USP16-201ENST00000334352 MROH1Q8NDA8 1641 aa10.36□□□□□ -0.75
USP16-201ENST00000334352 VWDEQ8N2E2 1590 aa10.36□□□□□ -0.75
USP16-201ENST00000334352 A2ML1A8K2U0 1454 aa10.35□□□□□ -0.75
USP16-201ENST00000334352 MTUS2Q5JR59 1369 aa10.35□□□□□ -0.75
USP16-201ENST00000334352 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
USP16-201ENST00000334352 DNMT1P26358 1616 aaKnown RBP10.34□□□□□ -0.75
USP16-201ENST00000334352 ARHGAP31Q2M1Z3 1444 aa10.34□□□□□ -0.75
USP16-201ENST00000334352 DUOX2Q9NRD8 1548 aa10.34□□□□□ -0.75
USP16-201ENST00000334352 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
USP16-201ENST00000334352 SPAG9O60271 1321 aaKnown RBP10.34□□□□□ -0.75
USP16-201ENST00000334352 MED14O60244 1454 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms