RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 L3MBTL2Q969R5 705 aa14.13□□□□□ -0.15
RARB-201ENST00000330688 ERCC6Q03468 1493 aa14.11□□□□□ -0.15
RARB-201ENST00000330688 PRG4Q92954 1404 aaPredicted RBP14.11□□□□□ -0.15
RARB-201ENST00000330688 DNMT1P26358 1616 aaKnown RBP14.1□□□□□ -0.15
RARB-201ENST00000330688 WASHC2AQ641Q2 1341 aa14.1□□□□□ -0.15
RARB-201ENST00000330688 MAGI1Q96QZ7 1491 aaPredicted RBP14.1□□□□□ -0.15
RARB-201ENST00000330688 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
RARB-201ENST00000330688 PLB1Q6P1J6 1458 aa14.1□□□□□ -0.15
RARB-201ENST00000330688 FBLN2P98095 1184 aa14.09□□□□□ -0.15
RARB-201ENST00000330688 CEP170Q5SW79 1584 aa14.09□□□□□ -0.15
RARB-201ENST00000330688 TROQ12816 1431 aaPredicted RBP14.09□□□□□ -0.15
RARB-201ENST00000330688 SYNJ2O15056 1496 aa14.09□□□□□ -0.15
RARB-201ENST00000330688 EIF4G2P78344 907 aaKnown RBP eCLIP14.08□□□□□ -0.16
RARB-201ENST00000330688 CFDP1Q9UEE9 299 aaPredicted RBP14.07□□□□□ -0.16
RARB-201ENST00000330688 JPH4Q96JJ6 628 aa14.07□□□□□ -0.16
RARB-201ENST00000330688 SLC4A1APQ9BWU0 796 aaKnown RBP14.06□□□□□ -0.16
RARB-201ENST00000330688 NBPF8Q3BBV2 869 aa14.05□□□□□ -0.16
RARB-201ENST00000330688 RPRD2Q5VT52 1461 aaKnown RBP14.05□□□□□ -0.16
RARB-201ENST00000330688 GPATCH8Q9UKJ3 1502 aaKnown RBP14.05□□□□□ -0.16
RARB-201ENST00000330688 FKBP8Q14318 412 aa14.04□□□□□ -0.16
RARB-201ENST00000330688 CAMSAP2Q08AD1 1489 aa14.04□□□□□ -0.16
RARB-201ENST00000330688 NUP160Q12769 1436 aa14.04□□□□□ -0.16
RARB-201ENST00000330688 C11orf95C9JLR9 678 aaPredicted RBP14.04□□□□□ -0.16
RARB-201ENST00000330688 ZNF777Q9ULD5 760 aaPredicted RBP14.03□□□□□ -0.16
RARB-201ENST00000330688 NCOA1Q15788 1441 aa14.03□□□□□ -0.16
RARB-201ENST00000330688 CARMIL2Q6F5E8 1435 aa14.03□□□□□ -0.16
RARB-201ENST00000330688 BCANQ96GW7 911 aa14.03□□□□□ -0.16
RARB-201ENST00000330688 TEX14Q8IWB6 1497 aa14.02□□□□□ -0.16
RARB-201ENST00000330688 KIF14Q15058 1648 aa14.02□□□□□ -0.17
RARB-201ENST00000330688 PZPP20742 1482 aa14.01□□□□□ -0.17
RARB-201ENST00000330688 TSHZ2Q9NRE2 1034 aa13.99□□□□□ -0.17
RARB-201ENST00000330688 CCDC7Q96M83 1385 aa13.98□□□□□ -0.17
RARB-201ENST00000330688 ADCY10Q96PN6 1610 aa13.98□□□□□ -0.17
RARB-201ENST00000330688 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
RARB-201ENST00000330688 ADGRL2O95490 1459 aa13.97□□□□□ -0.17
RARB-201ENST00000330688 PLEKHD1A6NEE1 506 aa13.97□□□□□ -0.17
RARB-201ENST00000330688 ITSN2Q9NZM3 1697 aa13.97□□□□□ -0.17
RARB-201ENST00000330688 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.17
RARB-201ENST00000330688 ATP10BO94823 1461 aa13.96□□□□□ -0.18
RARB-201ENST00000330688 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.18
RARB-201ENST00000330688 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
RARB-201ENST00000330688 CCDC184Q52MB2 194 aa13.95□□□□□ -0.18
RARB-201ENST00000330688 NEFLP07196 543 aa13.95□□□□□ -0.18
RARB-201ENST00000330688 ABCA8O94911 1581 aa13.95□□□□□ -0.18
RARB-201ENST00000330688 PKD2Q13563 968 aa13.94□□□□□ -0.18
RARB-201ENST00000330688 KIAA1107Q9UPP5 1409 aa13.94□□□□□ -0.18
RARB-201ENST00000330688 ABCC10Q5T3U5 1492 aa13.94□□□□□ -0.18
RARB-201ENST00000330688 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
RARB-201ENST00000330688 ADGBQ8N7X0 1667 aa13.93□□□□□ -0.18
RARB-201ENST00000330688 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
RARB-201ENST00000330688 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
RARB-201ENST00000330688 CROCC2H7BZ55 1655 aa13.92□□□□□ -0.18
RARB-201ENST00000330688 MBD5Q9P267 1494 aa13.9□□□□□ -0.18
RARB-201ENST00000330688 CDC42BPAQ5VT25 1732 aa13.89□□□□□ -0.19
RARB-201ENST00000330688 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
RARB-201ENST00000330688 NUP155O75694 1391 aa13.88□□□□□ -0.19
RARB-201ENST00000330688 HNRNPMP52272 730 aaKnown RBP eCLIP13.88□□□□□ -0.19
RARB-201ENST00000330688 TSPY4P0CV99 314 aa13.87□□□□□ -0.19
RARB-201ENST00000330688 TSPY10P0CW01 314 aa13.87□□□□□ -0.19
RARB-201ENST00000330688 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
RARB-201ENST00000330688 SHANK2Q9UPX8 1470 aa13.87□□□□□ -0.19
RARB-201ENST00000330688 PTPRGP23470 1445 aa13.87□□□□□ -0.19
RARB-201ENST00000330688 MYT1Q01538 1121 aa13.87□□□□□ -0.19
RARB-201ENST00000330688 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
RARB-201ENST00000330688 MRS2Q9HD23 443 aa13.85□□□□□ -0.19
RARB-201ENST00000330688 USP47Q96K76 1375 aa13.85□□□□□ -0.19
RARB-201ENST00000330688 KIF15Q9NS87 1388 aa13.83□□□□□ -0.19
RARB-201ENST00000330688 POLR1AO95602 1720 aaPredicted RBP13.81□□□□□ -0.2
RARB-201ENST00000330688 UHRF1BP1Q6BDS2 1440 aa13.81□□□□□ -0.2
RARB-201ENST00000330688 DHX29Q7Z478 1369 aaKnown RBP13.81□□□□□ -0.2
RARB-201ENST00000330688 KDM5DQ9BY66 1539 aa13.81□□□□□ -0.2
RARB-201ENST00000330688 IRX6P78412 446 aaPredicted RBP13.81□□□□□ -0.2
RARB-201ENST00000330688 BCORL1Q5H9F3 1711 aa13.8□□□□□ -0.2
RARB-201ENST00000330688 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
RARB-201ENST00000330688 ARHGEF5Q12774 1597 aa13.8□□□□□ -0.2
RARB-201ENST00000330688 KDM5CP41229 1560 aa13.79□□□□□ -0.2
RARB-201ENST00000330688 KDM2AQ9Y2K7 1162 aa13.78□□□□□ -0.2
RARB-201ENST00000330688 SAMD9LQ8IVG5 1584 aa13.78□□□□□ -0.2
RARB-201ENST00000330688 RALGAPBQ86X10 1494 aa13.78□□□□□ -0.2
RARB-201ENST00000330688 CARD11Q9BXL7 1154 aa13.77□□□□□ -0.2
RARB-201ENST00000330688 CCDC141Q6ZP82 1450 aa13.77□□□□□ -0.2
RARB-201ENST00000330688 ZBED9Q6R2W3 1325 aa13.77□□□□□ -0.2
RARB-201ENST00000330688 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
RARB-201ENST00000330688 ARID4BQ4LE39 1312 aaPredicted RBP13.77□□□□□ -0.21
RARB-201ENST00000330688 RSPH4AQ5TD94 716 aa13.77□□□□□ -0.21
RARB-201ENST00000330688 DCAF11Q8TEB1 546 aa13.76□□□□□ -0.21
RARB-201ENST00000330688 CDC42BPBQ9Y5S2 1711 aa13.76□□□□□ -0.21
RARB-201ENST00000330688 ARHGEF12Q9NZN5 1544 aa13.76□□□□□ -0.21
RARB-201ENST00000330688 PREX2Q70Z35 1606 aa13.75□□□□□ -0.21
RARB-201ENST00000330688 ST20-MTHFSA0A0A6YYL1 179 aa13.74□□□□□ -0.21
RARB-201ENST00000330688 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
RARB-201ENST00000330688 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
RARB-201ENST00000330688 CHD1O14646 1710 aa13.72□□□□□ -0.21
RARB-201ENST00000330688 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
RARB-201ENST00000330688 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.71□□□□□ -0.21
RARB-201ENST00000330688 TTC37Q6PGP7 1564 aa13.71□□□□□ -0.21
RARB-201ENST00000330688 ERICH6BQ5W0A0 696 aa13.71□□□□□ -0.22
RARB-201ENST00000330688 ROCK2O75116 1388 aaKnown RBP13.71□□□□□ -0.22
RARB-201ENST00000330688 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
RARB-201ENST00000330688 ERCC6L2Q5T890 1561 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms