RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 ARHGAP5Q13017 1502 aa26.54■■□□□ 1.84
CLDN6-201ENST00000328796 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
CLDN6-201ENST00000328796 SUPT6HQ7KZ85 1726 aaKnown RBP26.52■■□□□ 1.84
CLDN6-201ENST00000328796 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
CLDN6-201ENST00000328796 ADGRL1O94910 1474 aa26.48■■□□□ 1.83
CLDN6-201ENST00000328796 APLP2Q06481 763 aa26.48■■□□□ 1.83
CLDN6-201ENST00000328796 NCOA2Q15596 1464 aa26.48■■□□□ 1.83
CLDN6-201ENST00000328796 CCNB3Q8WWL7 1395 aa26.48■■□□□ 1.83
CLDN6-201ENST00000328796 DENND4BO75064 1496 aaPredicted RBP26.47■■□□□ 1.83
CLDN6-201ENST00000328796 FRMPD1Q5SYB0 1578 aa26.47■■□□□ 1.83
CLDN6-201ENST00000328796 RICTORQ6R327 1708 aa26.46■■□□□ 1.83
CLDN6-201ENST00000328796 RAPGEF3O95398 923 aa26.45■■□□□ 1.82
CLDN6-201ENST00000328796 SCAPERQ9BY12 1400 aa26.44■■□□□ 1.82
CLDN6-201ENST00000328796 ITSN2Q9NZM3 1697 aa26.43■■□□□ 1.82
CLDN6-201ENST00000328796 POGZQ7Z3K3 1410 aa26.4■■□□□ 1.82
CLDN6-201ENST00000328796 ABCC1P33527 1531 aa26.4■■□□□ 1.82
CLDN6-201ENST00000328796 SAMD9LQ8IVG5 1584 aa26.39■■□□□ 1.82
CLDN6-201ENST00000328796 CFDP1Q9UEE9 299 aaPredicted RBP26.39■■□□□ 1.82
CLDN6-201ENST00000328796 ZMYM4Q5VZL5 1548 aa26.37■■□□□ 1.81
CLDN6-201ENST00000328796 ARHGEF12Q9NZN5 1544 aa26.35■■□□□ 1.81
CLDN6-201ENST00000328796 ZNF777Q9ULD5 760 aaPredicted RBP26.33■■□□□ 1.81
CLDN6-201ENST00000328796 ZNF518AQ6AHZ1 1483 aa26.33■■□□□ 1.81
CLDN6-201ENST00000328796 PLEKHH2Q8IVE3 1493 aa26.32■■□□□ 1.8
CLDN6-201ENST00000328796 KIAA1107Q9UPP5 1409 aa26.32■■□□□ 1.8
CLDN6-201ENST00000328796 KDM5CP41229 1560 aa26.31■■□□□ 1.8
CLDN6-201ENST00000328796 MAGI2Q86UL8 1455 aa26.3■■□□□ 1.8
CLDN6-201ENST00000328796 SYCP2Q9BX26 1530 aa26.3■■□□□ 1.8
CLDN6-201ENST00000328796 TRAPPC8Q9Y2L5 1435 aa26.29■■□□□ 1.8
CLDN6-201ENST00000328796 MYOM3Q5VTT5 1437 aa26.28■■□□□ 1.8
CLDN6-201ENST00000328796 ARHGEF40Q8TER5 1519 aa26.27■■□□□ 1.8
CLDN6-201ENST00000328796 AFAP1Q8N556 730 aa26.27■■□□□ 1.8
CLDN6-201ENST00000328796 ZNF644Q9H582 1327 aaPredicted RBP26.27■■□□□ 1.8
CLDN6-201ENST00000328796 ZFYVE16Q7Z3T8 1539 aa26.25■■□□□ 1.79
CLDN6-201ENST00000328796 CAMSAP2Q08AD1 1489 aa26.24■■□□□ 1.79
CLDN6-201ENST00000328796 MIA2Q96PC5 1412 aa26.24■■□□□ 1.79
CLDN6-201ENST00000328796 YEATS2Q9ULM3 1422 aa26.23■■□□□ 1.79
CLDN6-201ENST00000328796 HNRNPMP52272 730 aaKnown RBP eCLIP26.23■■□□□ 1.79
CLDN6-201ENST00000328796 HECW2Q9P2P5 1572 aa26.23■■□□□ 1.79
CLDN6-201ENST00000328796 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
CLDN6-201ENST00000328796 MLH3Q9UHC1 1453 aa26.22■■□□□ 1.79
CLDN6-201ENST00000328796 KIDINS220Q9ULH0 1771 aa26.16■■□□□ 1.78
CLDN6-201ENST00000328796 ARHGEF5Q12774 1597 aa26.15■■□□□ 1.78
CLDN6-201ENST00000328796 FGD6Q6ZV73 1430 aa26.14■■□□□ 1.78
CLDN6-201ENST00000328796 AEBP2Q6ZN18 517 aaPredicted RBP26.14■■□□□ 1.78
CLDN6-201ENST00000328796 DIP2CQ9Y2E4 1556 aa26.14■■□□□ 1.77
CLDN6-201ENST00000328796 ABCA6Q8N139 1617 aa26.13■■□□□ 1.77
CLDN6-201ENST00000328796 ATP10AO60312 1499 aa26.13■■□□□ 1.77
CLDN6-201ENST00000328796 INO80Q9ULG1 1556 aaPredicted RBP26.13■■□□□ 1.77
CLDN6-201ENST00000328796 SPAG9O60271 1321 aaKnown RBP26.13■■□□□ 1.77
CLDN6-201ENST00000328796 CCDC141Q6ZP82 1450 aa26.12■■□□□ 1.77
CLDN6-201ENST00000328796 RSPH4AQ5TD94 716 aa26.12■■□□□ 1.77
CLDN6-201ENST00000328796 PTPN23Q9H3S7 1636 aa26.12■■□□□ 1.77
CLDN6-201ENST00000328796 ATP7AQ04656 1500 aa26.1■■□□□ 1.77
CLDN6-201ENST00000328796 C9orf84Q5VXU9 1444 aa26.1■■□□□ 1.77
CLDN6-201ENST00000328796 TCOF1Q13428 1488 aaKnown RBP26.1■■□□□ 1.77
CLDN6-201ENST00000328796 MYT1LQ9UL68 1186 aa26.09■■□□□ 1.77
CLDN6-201ENST00000328796 SIGLEC1Q9BZZ2 1709 aa26.09■■□□□ 1.77
CLDN6-201ENST00000328796 REREQ9P2R6 1566 aa26.09■■□□□ 1.77
CLDN6-201ENST00000328796 KDM4FA0A1W2PPD8 638 aa26.08■■□□□ 1.77
CLDN6-201ENST00000328796 RTEL1-TNFRSF6BF6WH68 1400 aa26.07■■□□□ 1.76
CLDN6-201ENST00000328796 PPARGC1BQ86YN6 1023 aaKnown RBP26.06■■□□□ 1.76
CLDN6-201ENST00000328796 BCORL1Q5H9F3 1711 aa26.03■■□□□ 1.76
CLDN6-201ENST00000328796 ARID4BQ4LE39 1312 aaPredicted RBP26.02■■□□□ 1.76
CLDN6-201ENST00000328796 MAST1Q9Y2H9 1570 aa26.01■■□□□ 1.75
CLDN6-201ENST00000328796 ADAMTSL3P82987 1691 aa26■■□□□ 1.75
CLDN6-201ENST00000328796 DNMT1P26358 1616 aaKnown RBP25.99■■□□□ 1.75
CLDN6-201ENST00000328796 AGLP35573 1532 aa25.99■■□□□ 1.75
CLDN6-201ENST00000328796 TSPY4P0CV99 314 aa25.98■■□□□ 1.75
CLDN6-201ENST00000328796 TSPY10P0CW01 314 aa25.98■■□□□ 1.75
CLDN6-201ENST00000328796 ADGBQ8N7X0 1667 aa25.98■■□□□ 1.75
CLDN6-201ENST00000328796 CROCC2H7BZ55 1655 aa25.97■■□□□ 1.75
CLDN6-201ENST00000328796 ABCC5O15440 1437 aa25.97■■□□□ 1.75
CLDN6-201ENST00000328796 PLXNC1O60486 1568 aa25.96■■□□□ 1.75
CLDN6-201ENST00000328796 SHANK2Q9UPX8 1470 aa25.95■■□□□ 1.75
CLDN6-201ENST00000328796 DAPK1P53355 1430 aa25.95■■□□□ 1.75
CLDN6-201ENST00000328796 A2MP01023 1474 aa25.95■■□□□ 1.74
CLDN6-201ENST00000328796 FAM50AQ14320 339 aaKnown RBP25.92■■□□□ 1.74
CLDN6-201ENST00000328796 MADDQ8WXG6 1647 aa25.91■■□□□ 1.74
CLDN6-201ENST00000328796 DHX29Q7Z478 1369 aaKnown RBP25.89■■□□□ 1.74
CLDN6-201ENST00000328796 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.87■■□□□ 1.73
CLDN6-201ENST00000328796 MLECQ14165 292 aa25.87■■□□□ 1.73
CLDN6-201ENST00000328796 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
CLDN6-201ENST00000328796 FER1L4A9Z1Z3 1794 aa25.84■■□□□ 1.73
CLDN6-201ENST00000328796 RIMS1Q86UR5 1692 aaKnown RBP25.83■■□□□ 1.72
CLDN6-201ENST00000328796 ADGRL2O95490 1459 aa25.81■■□□□ 1.72
CLDN6-201ENST00000328796 PTPRMP28827 1452 aa25.81■■□□□ 1.72
CLDN6-201ENST00000328796 KIF15Q9NS87 1388 aa25.79■■□□□ 1.72
CLDN6-201ENST00000328796 PTPRKQ15262 1439 aa25.79■■□□□ 1.72
CLDN6-201ENST00000328796 DUOX2Q9NRD8 1548 aa25.79■■□□□ 1.72
CLDN6-201ENST00000328796 CHIC2Q9UKJ5 165 aa25.78■■□□□ 1.72
CLDN6-201ENST00000328796 ANKRD30AQ9BXX3 1397 aa25.78■■□□□ 1.72
CLDN6-201ENST00000328796 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
CLDN6-201ENST00000328796 EIF2AK4Q9P2K8 1649 aaKnown RBP25.76■■□□□ 1.71
CLDN6-201ENST00000328796 KIF3BO15066 747 aa25.74■■□□□ 1.71
CLDN6-201ENST00000328796 RRP7BPQ9NSQ0 103 aa25.74■■□□□ 1.71
CLDN6-201ENST00000328796 GGT6Q6P531 493 aa25.71■■□□□ 1.71
CLDN6-201ENST00000328796 PPP6R1Q9UPN7 881 aa25.71■■□□□ 1.71
CLDN6-201ENST00000328796 RNF17Q9BXT8 1623 aaKnown RBP25.71■■□□□ 1.71
CLDN6-201ENST00000328796 ERBINQ96RT1 1412 aa25.71■■□□□ 1.71
CLDN6-201ENST00000328796 CNTLNQ9NXG0 1405 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms