RNA–Protein interactions for RNA: ENST00000323250.9

TYMS-202, Transcript of thymidylate synthetase, humanhuman

TSL 1 (best) BASIC

Gene TYMS, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-202ENST00000323250 ARHGAP5Q13017 1502 aa28.38■■■□□ 2.13
TYMS-202ENST00000323250 YEATS2Q9ULM3 1422 aa28.37■■■□□ 2.13
TYMS-202ENST00000323250 ZMYM4Q5VZL5 1548 aa28.35■■■□□ 2.13
TYMS-202ENST00000323250 ARHGEF40Q8TER5 1519 aa28.34■■■□□ 2.13
TYMS-202ENST00000323250 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
TYMS-202ENST00000323250 AFAP1Q8N556 730 aa28.31■■■□□ 2.12
TYMS-202ENST00000323250 ARID4BQ4LE39 1312 aaPredicted RBP28.3■■■□□ 2.12
TYMS-202ENST00000323250 ZFYVE16Q7Z3T8 1539 aa28.29■■■□□ 2.12
TYMS-202ENST00000323250 MAGI2Q86UL8 1455 aa28.28■■■□□ 2.12
TYMS-202ENST00000323250 PREX2Q70Z35 1606 aa28.28■■■□□ 2.12
TYMS-202ENST00000323250 ARHGEF12Q9NZN5 1544 aa28.28■■■□□ 2.12
TYMS-202ENST00000323250 GPATCH8Q9UKJ3 1502 aaKnown RBP28.26■■■□□ 2.11
TYMS-202ENST00000323250 ADAMTSL3P82987 1691 aa28.25■■■□□ 2.11
TYMS-202ENST00000323250 MTUS2Q5JR59 1369 aa28.24■■■□□ 2.11
TYMS-202ENST00000323250 CDC42BPAQ5VT25 1732 aa28.23■■■□□ 2.11
TYMS-202ENST00000323250 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
TYMS-202ENST00000323250 TRAPPC8Q9Y2L5 1435 aa28.23■■■□□ 2.11
TYMS-202ENST00000323250 ZNF518AQ6AHZ1 1483 aa28.22■■■□□ 2.11
TYMS-202ENST00000323250 BCORL1Q5H9F3 1711 aa28.21■■■□□ 2.11
TYMS-202ENST00000323250 ABCC1P33527 1531 aa28.2■■■□□ 2.1
TYMS-202ENST00000323250 ZNF777Q9ULD5 760 aaPredicted RBP28.2■■■□□ 2.1
TYMS-202ENST00000323250 KDM5CP41229 1560 aa28.2■■■□□ 2.1
TYMS-202ENST00000323250 ATP10AO60312 1499 aa28.17■■■□□ 2.1
TYMS-202ENST00000323250 PTPRMP28827 1452 aa28.17■■■□□ 2.1
TYMS-202ENST00000323250 VPS8Q8N3P4 1428 aa28.17■■■□□ 2.1
TYMS-202ENST00000323250 CCNB3Q8WWL7 1395 aa28.16■■■□□ 2.1
TYMS-202ENST00000323250 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
TYMS-202ENST00000323250 SAMD9LQ8IVG5 1584 aa28.15■■■□□ 2.1
TYMS-202ENST00000323250 MADDQ8WXG6 1647 aa28.14■■■□□ 2.1
TYMS-202ENST00000323250 EHBP1L1Q8N3D4 1523 aa28.13■■■□□ 2.09
TYMS-202ENST00000323250 HNRNPMP52272 730 aaKnown RBP eCLIP28.13■■■□□ 2.091e-7■■■■■ 27.4
TYMS-202ENST00000323250 MLECQ14165 292 aa28.13■■■□□ 2.09
TYMS-202ENST00000323250 C9orf84Q5VXU9 1444 aa28.12■■■□□ 2.09
TYMS-202ENST00000323250 ITSN2Q9NZM3 1697 aa28.11■■■□□ 2.09
TYMS-202ENST00000323250 MLH3Q9UHC1 1453 aa28.11■■■□□ 2.09
TYMS-202ENST00000323250 MYT1LQ9UL68 1186 aa28.11■■■□□ 2.09
TYMS-202ENST00000323250 HECW2Q9P2P5 1572 aa28.09■■■□□ 2.09
TYMS-202ENST00000323250 ZNF644Q9H582 1327 aaPredicted RBP28.09■■■□□ 2.09
TYMS-202ENST00000323250 SYCP2Q9BX26 1530 aa28.08■■■□□ 2.09
TYMS-202ENST00000323250 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
TYMS-202ENST00000323250 DIP2CQ9Y2E4 1556 aa28.07■■■□□ 2.08
TYMS-202ENST00000323250 ABCA6Q8N139 1617 aa28.04■■■□□ 2.08
TYMS-202ENST00000323250 KIAA1107Q9UPP5 1409 aa28.04■■■□□ 2.08
TYMS-202ENST00000323250 NCOA2Q15596 1464 aa28.03■■■□□ 2.08
TYMS-202ENST00000323250 KANK4Q5T7N3 995 aaPredicted RBP28.03■■■□□ 2.08
TYMS-202ENST00000323250 RIMS1Q86UR5 1692 aaKnown RBP28.02■■■□□ 2.08
TYMS-202ENST00000323250 KIDINS220Q9ULH0 1771 aa28.01■■■□□ 2.07
TYMS-202ENST00000323250 LRRC9Q6ZRR7 1453 aa28■■■□□ 2.07
TYMS-202ENST00000323250 SPAG9O60271 1321 aaKnown RBP27.99■■■□□ 2.07
TYMS-202ENST00000323250 PLPPR3Q6T4P5 718 aa27.99■■■□□ 2.07
TYMS-202ENST00000323250 PLEKHH2Q8IVE3 1493 aa27.99■■■□□ 2.07
TYMS-202ENST00000323250 REREQ9P2R6 1566 aa27.97■■■□□ 2.07
TYMS-202ENST00000323250 MBD5Q9P267 1494 aa27.96■■■□□ 2.07
TYMS-202ENST00000323250 SUPT6HQ7KZ85 1726 aaKnown RBP27.95■■■□□ 2.06
TYMS-202ENST00000323250 MAP3K1Q13233 1512 aa27.92■■■□□ 2.06
TYMS-202ENST00000323250 AGLP35573 1532 aa27.91■■■□□ 2.06
TYMS-202ENST00000323250 CEBPAP49715 358 aaPredicted RBP27.9■■■□□ 2.06
TYMS-202ENST00000323250 FER1L4A9Z1Z3 1794 aa27.9■■■□□ 2.06
TYMS-202ENST00000323250 ATP7AQ04656 1500 aa27.89■■■□□ 2.06
TYMS-202ENST00000323250 INO80Q9ULG1 1556 aaPredicted RBP27.88■■■□□ 2.05
TYMS-202ENST00000323250 CAMSAP2Q08AD1 1489 aa27.86■■■□□ 2.05
TYMS-202ENST00000323250 LMTK3Q96Q04 1460 aa27.85■■■□□ 2.05
TYMS-202ENST00000323250 A2MP01023 1474 aa27.81■■■□□ 2.04
TYMS-202ENST00000323250 CCDC141Q6ZP82 1450 aa27.78■■■□□ 2.04
TYMS-202ENST00000323250 RTEL1-TNFRSF6BF6WH68 1400 aa27.78■■■□□ 2.04
TYMS-202ENST00000323250 HSPA2P54652 639 aa27.78■■■□□ 2.04
TYMS-202ENST00000323250 PLXNC1O60486 1568 aa27.77■■■□□ 2.04
TYMS-202ENST00000323250 MYOM3Q5VTT5 1437 aa27.75■■■□□ 2.03
TYMS-202ENST00000323250 APLP2Q06481 763 aa27.75■■■□□ 2.03
TYMS-202ENST00000323250 RSPH4AQ5TD94 716 aa27.74■■■□□ 2.03
TYMS-202ENST00000323250 MIA2Q96PC5 1412 aa27.71■■■□□ 2.03
TYMS-202ENST00000323250 ESF1Q9H501 851 aaKnown RBP27.71■■■□□ 2.03
TYMS-202ENST00000323250 ARHGEF5Q12774 1597 aa27.7■■■□□ 2.03
TYMS-202ENST00000323250 GGT6Q6P531 493 aa27.7■■■□□ 2.02
TYMS-202ENST00000323250 DHX29Q7Z478 1369 aaKnown RBP27.7■■■□□ 2.02
TYMS-202ENST00000323250 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
TYMS-202ENST00000323250 CNTLNQ9NXG0 1405 aa27.67■■■□□ 2.02
TYMS-202ENST00000323250 C3P01024 1663 aa27.66■■■□□ 2.02
TYMS-202ENST00000323250 TSPY4P0CV99 314 aa27.66■■■□□ 2.02
TYMS-202ENST00000323250 TSPY10P0CW01 314 aa27.66■■■□□ 2.02
TYMS-202ENST00000323250 ZMYM3Q14202 1370 aa27.64■■■□□ 2.02
TYMS-202ENST00000323250 KIF3BO15066 747 aa27.61■■■□□ 2.01
TYMS-202ENST00000323250 PREX1Q8TCU6 1659 aa27.59■■■□□ 2.01
TYMS-202ENST00000323250 UHRF1BP1Q6BDS2 1440 aa27.57■■■□□ 2
TYMS-202ENST00000323250 FGD6Q6ZV73 1430 aa27.57■■■□□ 2
TYMS-202ENST00000323250 MAST1Q9Y2H9 1570 aa27.56■■■□□ 2
TYMS-202ENST00000323250 CLTCQ00610 1675 aaKnown RBP27.56■■■□□ 2
TYMS-202ENST00000323250 PPP6R1Q9UPN7 881 aa27.56■■■□□ 2
TYMS-202ENST00000323250 ABCC5O15440 1437 aa27.55■■■□□ 2
TYMS-202ENST00000323250 MROH2AA6NES4 1674 aa27.55■■■□□ 2
TYMS-202ENST00000323250 SETD1BQ9UPS6 1966 aaKnown RBP27.55■■■□□ 2
TYMS-202ENST00000323250 PTPN23Q9H3S7 1636 aa27.54■■■□□ 2
TYMS-202ENST00000323250 TCOF1Q13428 1488 aaKnown RBP27.51■■■□□ 2
TYMS-202ENST00000323250 NPATQ14207 1427 aa27.51■■□□□ 1.99
TYMS-202ENST00000323250 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
TYMS-202ENST00000323250 ILDR1Q86SU0 546 aaPredicted RBP27.48■■□□□ 1.99
TYMS-202ENST00000323250 DAPK1P53355 1430 aa27.47■■□□□ 1.99
TYMS-202ENST00000323250 WASHC2CQ9Y4E1 1318 aa27.44■■□□□ 1.98
TYMS-202ENST00000323250 FBXO31Q5XUX0 539 aaPredicted RBP27.44■■□□□ 1.98
TYMS-202ENST00000323250 RRP7BPQ9NSQ0 103 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms