RNA–Protein interactions for RNA: ENST00000322269.10

FAM3A-201, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-201ENST00000322269 PREX2Q70Z35 1606 aa27.68■■■□□ 2.02
FAM3A-201ENST00000322269 MYO5CQ9NQX4 1742 aa27.66■■■□□ 2.02
FAM3A-201ENST00000322269 CDC42BPBQ9Y5S2 1711 aa27.66■■■□□ 2.02
FAM3A-201ENST00000322269 ABCA9Q8IUA7 1624 aa27.63■■■□□ 2.01
FAM3A-201ENST00000322269 ZNF644Q9H582 1327 aaPredicted RBP27.62■■■□□ 2.01
FAM3A-201ENST00000322269 ZNF777Q9ULD5 760 aaPredicted RBP27.62■■■□□ 2.01
FAM3A-201ENST00000322269 CAMSAP2Q08AD1 1489 aa27.62■■■□□ 2.01
FAM3A-201ENST00000322269 PLCH2O75038 1416 aa27.6■■■□□ 2.01
FAM3A-201ENST00000322269 ARHGAP5Q13017 1502 aa27.59■■■□□ 2.01
FAM3A-201ENST00000322269 ARAP3Q8WWN8 1544 aa27.55■■■□□ 2
FAM3A-201ENST00000322269 PTPRKQ15262 1439 aa27.54■■■□□ 2
FAM3A-201ENST00000322269 DNMT1P26358 1616 aaKnown RBP27.53■■■□□ 2
FAM3A-201ENST00000322269 SAMD9LQ8IVG5 1584 aa27.53■■■□□ 2
FAM3A-201ENST00000322269 CLSPNQ9HAW4 1339 aa27.51■■□□□ 1.99
FAM3A-201ENST00000322269 EFCAB2Q5VUJ9 269 aa27.51■■□□□ 1.99
FAM3A-201ENST00000322269 DAPK1P53355 1430 aa27.5■■□□□ 1.99
FAM3A-201ENST00000322269 ABCC5O15440 1437 aa27.49■■□□□ 1.99
FAM3A-201ENST00000322269 DHX57Q6P158 1386 aaKnown RBP27.47■■□□□ 1.99
FAM3A-201ENST00000322269 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
FAM3A-201ENST00000322269 CD109Q6YHK3 1445 aa27.46■■□□□ 1.99
FAM3A-201ENST00000322269 PLEKHH2Q8IVE3 1493 aa27.45■■□□□ 1.99
FAM3A-201ENST00000322269 GLI2P10070 1586 aa27.45■■□□□ 1.99
FAM3A-201ENST00000322269 ZNF316A6NFI3 1004 aaPredicted RBP27.44■■□□□ 1.98
FAM3A-201ENST00000322269 FANCAO15360 1455 aa27.44■■□□□ 1.98
FAM3A-201ENST00000322269 ARHGEF5Q12774 1597 aa27.44■■□□□ 1.98
FAM3A-201ENST00000322269 MBD5Q9P267 1494 aa27.44■■□□□ 1.98
FAM3A-201ENST00000322269 KIAA1107Q9UPP5 1409 aa27.43■■□□□ 1.98
FAM3A-201ENST00000322269 HNRNPMP52272 730 aaKnown RBP eCLIP27.43■■□□□ 1.98
FAM3A-201ENST00000322269 DIP2BQ9P265 1576 aa27.42■■□□□ 1.98
FAM3A-201ENST00000322269 SETD5Q9C0A6 1442 aa27.42■■□□□ 1.98
FAM3A-201ENST00000322269 CROCC2H7BZ55 1655 aa27.42■■□□□ 1.98
FAM3A-201ENST00000322269 CHIC2Q9UKJ5 165 aa27.41■■□□□ 1.98
FAM3A-201ENST00000322269 SYCP2Q9BX26 1530 aa27.41■■□□□ 1.98
FAM3A-201ENST00000322269 RSPH4AQ5TD94 716 aa27.4■■□□□ 1.98
FAM3A-201ENST00000322269 MAP3K4Q9Y6R4 1608 aa27.4■■□□□ 1.98
FAM3A-201ENST00000322269 RAB3GAP2Q9H2M9 1393 aa27.4■■□□□ 1.98
FAM3A-201ENST00000322269 ABCC1P33527 1531 aa27.39■■□□□ 1.97
FAM3A-201ENST00000322269 HFM1A2PYH4 1435 aa27.38■■□□□ 1.97
FAM3A-201ENST00000322269 AKNAQ7Z591 1439 aa27.38■■□□□ 1.97
FAM3A-201ENST00000322269 CCDC141Q6ZP82 1450 aa27.37■■□□□ 1.97
FAM3A-201ENST00000322269 TRHP20396 242 aaPredicted RBP27.37■■□□□ 1.97
FAM3A-201ENST00000322269 FAM69CQ0P6D2 419 aa27.37■■□□□ 1.97
FAM3A-201ENST00000322269 ROCK1Q13464 1354 aa27.36■■□□□ 1.97
FAM3A-201ENST00000322269 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
FAM3A-201ENST00000322269 KIF13AQ9H1H9 1805 aa27.36■■□□□ 1.97
FAM3A-201ENST00000322269 SHANK2Q9UPX8 1470 aa27.36■■□□□ 1.97
FAM3A-201ENST00000322269 CFAP74Q9C0B2 1584 aa27.34■■□□□ 1.97
FAM3A-201ENST00000322269 TSPY4P0CV99 314 aa27.34■■□□□ 1.97
FAM3A-201ENST00000322269 TSPY10P0CW01 314 aa27.34■■□□□ 1.97
FAM3A-201ENST00000322269 NAIPQ13075 1403 aa27.34■■□□□ 1.97
FAM3A-201ENST00000322269 ADGBQ8N7X0 1667 aa27.33■■□□□ 1.97
FAM3A-201ENST00000322269 RRP7BPQ9NSQ0 103 aa27.32■■□□□ 1.96
FAM3A-201ENST00000322269 C9orf84Q5VXU9 1444 aa27.31■■□□□ 1.96
FAM3A-201ENST00000322269 ADGRL1O94910 1474 aa27.31■■□□□ 1.96
FAM3A-201ENST00000322269 ADGRL2O95490 1459 aa27.31■■□□□ 1.96
FAM3A-201ENST00000322269 GCC2Q8IWJ2 1684 aa27.3■■□□□ 1.96
FAM3A-201ENST00000322269 NCOA1Q15788 1441 aa27.29■■□□□ 1.96
FAM3A-201ENST00000322269 ANKRD30AQ9BXX3 1397 aa27.27■■□□□ 1.96
FAM3A-201ENST00000322269 TRAPPC8Q9Y2L5 1435 aa27.27■■□□□ 1.96
FAM3A-201ENST00000322269 NEO1Q92859 1461 aa27.27■■□□□ 1.96
FAM3A-201ENST00000322269 SCAPERQ9BY12 1400 aa27.27■■□□□ 1.96
FAM3A-201ENST00000322269 MAST1Q9Y2H9 1570 aa27.26■■□□□ 1.95
FAM3A-201ENST00000322269 TSPOAP1O95153 1857 aa27.25■■□□□ 1.95
FAM3A-201ENST00000322269 AFAP1Q8N556 730 aa27.2■■□□□ 1.95
FAM3A-201ENST00000322269 PPRC1Q5VV67 1664 aaKnown RBP27.19■■□□□ 1.94
FAM3A-201ENST00000322269 TEX14Q8IWB6 1497 aa27.17■■□□□ 1.94
FAM3A-201ENST00000322269 KDM6BO15054 1643 aa27.17■■□□□ 1.94
FAM3A-201ENST00000322269 ZNF518AQ6AHZ1 1483 aa27.16■■□□□ 1.94
FAM3A-201ENST00000322269 SPAG9O60271 1321 aaKnown RBP27.15■■□□□ 1.94
FAM3A-201ENST00000322269 PLXNC1O60486 1568 aa27.15■■□□□ 1.94
FAM3A-201ENST00000322269 RTEL1-TNFRSF6BF6WH68 1400 aa27.15■■□□□ 1.94
FAM3A-201ENST00000322269 KIF15Q9NS87 1388 aa27.14■■□□□ 1.94
FAM3A-201ENST00000322269 POGZQ7Z3K3 1410 aa27.14■■□□□ 1.93
FAM3A-201ENST00000322269 ZFYVE16Q7Z3T8 1539 aa27.12■■□□□ 1.93
FAM3A-201ENST00000322269 ANKRD50Q9ULJ7 1429 aa27.11■■□□□ 1.93
FAM3A-201ENST00000322269 DENND4BO75064 1496 aaPredicted RBP27.11■■□□□ 1.93
FAM3A-201ENST00000322269 INO80Q9ULG1 1556 aaPredicted RBP27.1■■□□□ 1.93
FAM3A-201ENST00000322269 KDM5CP41229 1560 aa27.09■■□□□ 1.93
FAM3A-201ENST00000322269 ACIN1Q9UKV3 1341 aaKnown RBP27.09■■□□□ 1.93
FAM3A-201ENST00000322269 ATP7AQ04656 1500 aa27.08■■□□□ 1.93
FAM3A-201ENST00000322269 DUOX2Q9NRD8 1548 aa27.05■■□□□ 1.92
FAM3A-201ENST00000322269 RICTORQ6R327 1708 aa27.05■■□□□ 1.92
FAM3A-201ENST00000322269 RAPGEF3O95398 923 aa27.04■■□□□ 1.92
FAM3A-201ENST00000322269 SCAF1Q9H7N4 1312 aaKnown RBP27.04■■□□□ 1.92
FAM3A-201ENST00000322269 MYT1LQ9UL68 1186 aa27.04■■□□□ 1.92
FAM3A-201ENST00000322269 KIDINS220Q9ULH0 1771 aa27.03■■□□□ 1.92
FAM3A-201ENST00000322269 MLH3Q9UHC1 1453 aa27.02■■□□□ 1.92
FAM3A-201ENST00000322269 TRIM52Q96A61 297 aa27.02■■□□□ 1.92
FAM3A-201ENST00000322269 HECW2Q9P2P5 1572 aa27.01■■□□□ 1.91
FAM3A-201ENST00000322269 ERBINQ96RT1 1412 aa26.99■■□□□ 1.91
FAM3A-201ENST00000322269 FRMPD1Q5SYB0 1578 aa26.98■■□□□ 1.91
FAM3A-201ENST00000322269 CENPBP07199 599 aaPredicted RBP26.97■■□□□ 1.91
FAM3A-201ENST00000322269 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
FAM3A-201ENST00000322269 NEUROD1Q13562 356 aa26.93■■□□□ 1.9
FAM3A-201ENST00000322269 ZMYM4Q5VZL5 1548 aa26.92■■□□□ 1.9
FAM3A-201ENST00000322269 DHX29Q7Z478 1369 aaKnown RBP26.91■■□□□ 1.9
FAM3A-201ENST00000322269 MPHOSPH9Q99550 1183 aa26.9■■□□□ 1.9
FAM3A-201ENST00000322269 ABCA6Q8N139 1617 aa26.89■■□□□ 1.9
FAM3A-201ENST00000322269 COL17A1Q9UMD9 1497 aaPredicted RBP26.89■■□□□ 1.9
FAM3A-201ENST00000322269 MIER1Q8N108 512 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms