RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
DNMT3A-202ENST00000321117 EIF5BO60841 1220 aaKnown RBP16.79■□□□□ 0.28
DNMT3A-202ENST00000321117 KIF7Q2M1P5 1343 aa16.78■□□□□ 0.28
DNMT3A-202ENST00000321117 EFCAB5A4FU69 1503 aa16.78■□□□□ 0.28
DNMT3A-202ENST00000321117 TCERG1O14776 1098 aaKnown RBP16.77■□□□□ 0.28
DNMT3A-202ENST00000321117 PCF11O94913 1555 aaKnown RBP16.77■□□□□ 0.27
DNMT3A-202ENST00000321117 RALBP1Q15311 655 aa16.76■□□□□ 0.27
DNMT3A-202ENST00000321117 CC2D1BQ5T0F9 858 aaKnown RBP16.76■□□□□ 0.27
DNMT3A-202ENST00000321117 MSH5O43196 834 aa16.76■□□□□ 0.27
DNMT3A-202ENST00000321117 CCDC184Q52MB2 194 aa16.76■□□□□ 0.27
DNMT3A-202ENST00000321117 RTN4Q9NQC3 1192 aaKnown RBP16.74■□□□□ 0.27
DNMT3A-202ENST00000321117 UPF2Q9HAU5 1272 aaKnown RBP16.74■□□□□ 0.27
DNMT3A-202ENST00000321117 NAIPQ13075 1403 aa16.74■□□□□ 0.27
DNMT3A-202ENST00000321117 ROCK2O75116 1388 aaKnown RBP16.73■□□□□ 0.27
DNMT3A-202ENST00000321117 USP47Q96K76 1375 aa16.72■□□□□ 0.27
DNMT3A-202ENST00000321117 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
DNMT3A-202ENST00000321117 KTN1Q86UP2 1357 aaKnown RBP16.72■□□□□ 0.27
DNMT3A-202ENST00000321117 KNSTRNQ9Y448 316 aa16.72■□□□□ 0.27
DNMT3A-202ENST00000321117 NUP155O75694 1391 aa16.72■□□□□ 0.27
DNMT3A-202ENST00000321117 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
DNMT3A-202ENST00000321117 GAPVD1Q14C86 1478 aa16.69■□□□□ 0.26
DNMT3A-202ENST00000321117 KIF15Q9NS87 1388 aa16.69■□□□□ 0.26
DNMT3A-202ENST00000321117 NLRP13Q86W25 1043 aa16.69■□□□□ 0.26
DNMT3A-202ENST00000321117 RGS3P49796 1198 aa16.68■□□□□ 0.26
DNMT3A-202ENST00000321117 ST20-MTHFSA0A0A6YYL1 179 aa16.67■□□□□ 0.26
DNMT3A-202ENST00000321117 NBPF8Q3BBV2 869 aa16.67■□□□□ 0.26
DNMT3A-202ENST00000321117 PDE3BQ13370 1112 aa16.67■□□□□ 0.26
DNMT3A-202ENST00000321117 MYBBP1AQ9BQG0 1328 aaKnown RBP16.67■□□□□ 0.26
DNMT3A-202ENST00000321117 AQRO60306 1485 aaKnown RBP eCLIP16.66■□□□□ 0.261e-7■■■■■ 30
DNMT3A-202ENST00000321117 RRP1P56182 461 aaKnown RBP16.66■□□□□ 0.26
DNMT3A-202ENST00000321117 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
DNMT3A-202ENST00000321117 TMF1P82094 1093 aa16.65■□□□□ 0.26
DNMT3A-202ENST00000321117 ZNF644Q9H582 1327 aaPredicted RBP16.64■□□□□ 0.25
DNMT3A-202ENST00000321117 CDCA8Q53HL2 280 aa16.64■□□□□ 0.25
DNMT3A-202ENST00000321117 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
DNMT3A-202ENST00000321117 PDE4AP27815 886 aa16.63■□□□□ 0.25
DNMT3A-202ENST00000321117 POLA1P09884 1462 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-202ENST00000321117 BECN1Q14457 450 aa16.62■□□□□ 0.25
DNMT3A-202ENST00000321117 AKNAQ7Z591 1439 aa16.62■□□□□ 0.25
DNMT3A-202ENST00000321117 C11orf95C9JLR9 678 aaPredicted RBP16.62■□□□□ 0.25
DNMT3A-202ENST00000321117 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
DNMT3A-202ENST00000321117 SUPT6HQ7KZ85 1726 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-202ENST00000321117 TOPBP1Q92547 1522 aa16.59■□□□□ 0.25
DNMT3A-202ENST00000321117 CHGAP10645 457 aaKnown RBP16.59■□□□□ 0.25
DNMT3A-202ENST00000321117 ARXQ96QS3 562 aa16.59■□□□□ 0.25
DNMT3A-202ENST00000321117 ARID4BQ4LE39 1312 aaPredicted RBP16.59■□□□□ 0.25
DNMT3A-202ENST00000321117 PTPN23Q9H3S7 1636 aa16.58■□□□□ 0.25
DNMT3A-202ENST00000321117 USP35Q9P2H5 1018 aa16.57■□□□□ 0.24
DNMT3A-202ENST00000321117 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
DNMT3A-202ENST00000321117 MIA2Q96PC5 1412 aa16.57■□□□□ 0.24
DNMT3A-202ENST00000321117 ABCA10Q8WWZ4 1543 aa16.57■□□□□ 0.24
DNMT3A-202ENST00000321117 PTPRKQ15262 1439 aa16.56■□□□□ 0.24
DNMT3A-202ENST00000321117 PLIN1O60240 522 aa16.56■□□□□ 0.24
DNMT3A-202ENST00000321117 MS4A1P11836 297 aa16.55■□□□□ 0.24
DNMT3A-202ENST00000321117 DNMBPQ6XZF7 1577 aa16.54■□□□□ 0.24
DNMT3A-202ENST00000321117 PNISRQ8TF01 805 aaKnown RBP16.53■□□□□ 0.24
DNMT3A-202ENST00000321117 NCOA1Q15788 1441 aa16.53■□□□□ 0.24
DNMT3A-202ENST00000321117 CARMIL2Q6F5E8 1435 aa16.53■□□□□ 0.24
DNMT3A-202ENST00000321117 HNRNPMP52272 730 aaKnown RBP eCLIP16.52■□□□□ 0.24
DNMT3A-202ENST00000321117 HSP90AA1P07900 732 aaKnown RBP16.51■□□□□ 0.23
DNMT3A-202ENST00000321117 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
DNMT3A-202ENST00000321117 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
DNMT3A-202ENST00000321117 CRBNQ96SW2 442 aa16.51■□□□□ 0.23
DNMT3A-202ENST00000321117 NESP48681 1621 aa16.51■□□□□ 0.23
DNMT3A-202ENST00000321117 FRAT1Q92837 279 aaPredicted RBP16.5■□□□□ 0.23
DNMT3A-202ENST00000321117 ANKRD30BQ9BXX2 1392 aa16.49■□□□□ 0.23
DNMT3A-202ENST00000321117 CFAP43Q8NDM7 1665 aa16.49■□□□□ 0.23
DNMT3A-202ENST00000321117 PANK3Q9H999 370 aa16.49■□□□□ 0.23
DNMT3A-202ENST00000321117 CUL7Q14999 1698 aa16.48■□□□□ 0.23
DNMT3A-202ENST00000321117 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
DNMT3A-202ENST00000321117 DAPK1P53355 1430 aa16.47■□□□□ 0.23
DNMT3A-202ENST00000321117 ANKRD50Q9ULJ7 1429 aa16.46■□□□□ 0.23
DNMT3A-202ENST00000321117 HECW1Q76N89 1606 aa16.46■□□□□ 0.23
DNMT3A-202ENST00000321117 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
DNMT3A-202ENST00000321117 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
DNMT3A-202ENST00000321117 KIAA1107Q9UPP5 1409 aa16.45■□□□□ 0.22
DNMT3A-202ENST00000321117 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
DNMT3A-202ENST00000321117 CENPQQ7L2Z9 268 aaPredicted RBP16.45■□□□□ 0.22
DNMT3A-202ENST00000321117 CC2D2AQ9P2K1 1620 aa16.44■□□□□ 0.22
DNMT3A-202ENST00000321117 ROCK1Q13464 1354 aa16.44■□□□□ 0.22
DNMT3A-202ENST00000321117 CDCA7LQ96GN5 454 aa16.43■□□□□ 0.22
DNMT3A-202ENST00000321117 RPRD2Q5VT52 1461 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-202ENST00000321117 CDK13Q14004 1512 aaKnown RBP16.43■□□□□ 0.22
DNMT3A-202ENST00000321117 PRDM2Q13029 1718 aa16.43■□□□□ 0.22
DNMT3A-202ENST00000321117 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
DNMT3A-202ENST00000321117 FAM161AQ3B820 660 aa16.42■□□□□ 0.22
DNMT3A-202ENST00000321117 JPH4Q96JJ6 628 aa16.42■□□□□ 0.22
DNMT3A-202ENST00000321117 ANP32BQ92688 251 aaKnown RBP16.42■□□□□ 0.22
DNMT3A-202ENST00000321117 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
DNMT3A-202ENST00000321117 GSE1Q14687 1217 aa16.41■□□□□ 0.22
DNMT3A-202ENST00000321117 RSPH4AQ5TD94 716 aa16.41■□□□□ 0.22
DNMT3A-202ENST00000321117 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
DNMT3A-202ENST00000321117 FTSJ3Q8IY81 847 aaKnown RBP16.4■□□□□ 0.22
DNMT3A-202ENST00000321117 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
DNMT3A-202ENST00000321117 CCDC146Q8IYE0 955 aa16.39■□□□□ 0.22
DNMT3A-202ENST00000321117 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.39■□□□□ 0.21
DNMT3A-202ENST00000321117 GRIN2BQ13224 1484 aa16.38■□□□□ 0.21
DNMT3A-202ENST00000321117 SLKQ9H2G2 1235 aaPredicted RBP16.38■□□□□ 0.21
DNMT3A-202ENST00000321117 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
DNMT3A-202ENST00000321117 GLIPR1L2Q4G1C9 344 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms