RNA–Protein interactions for RNA: ENST00000319432.9

CCDC93-201, Transcript of coiled-coil domain containing 93, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CCDC93, Length 6,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-201ENST00000319432 SOX12O15370 315 aa9.74□□□□□ -0.85
CCDC93-201ENST00000319432 TONSLQ96HA7 1378 aa9.74□□□□□ -0.85
CCDC93-201ENST00000319432 DDX10Q13206 875 aaKnown RBP9.74□□□□□ -0.85
CCDC93-201ENST00000319432 EID1Q9Y6B2 187 aa9.73□□□□□ -0.85
CCDC93-201ENST00000319432 KANK1Q14678 1352 aa9.73□□□□□ -0.85
CCDC93-201ENST00000319432 CCDC136Q96JN2 1154 aa9.73□□□□□ -0.85
CCDC93-201ENST00000319432 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
CCDC93-201ENST00000319432 HDGFP51858 240 aaKnown RBP9.73□□□□□ -0.85
CCDC93-201ENST00000319432 SYNJ2O15056 1496 aa9.73□□□□□ -0.85
CCDC93-201ENST00000319432 LAS1LQ9Y4W2 734 aaKnown RBP9.73□□□□□ -0.85
CCDC93-201ENST00000319432 PKD2Q13563 968 aa9.72□□□□□ -0.85
CCDC93-201ENST00000319432 CEBPAP49715 358 aaPredicted RBP9.72□□□□□ -0.85
CCDC93-201ENST00000319432 TPRNQ4KMQ1 711 aa9.71□□□□□ -0.85
CCDC93-201ENST00000319432 NUP155O75694 1391 aa9.7□□□□□ -0.86
CCDC93-201ENST00000319432 DCAF11Q8TEB1 546 aa9.69□□□□□ -0.86
CCDC93-201ENST00000319432 GRIN2AQ12879 1464 aa9.68□□□□□ -0.86
CCDC93-201ENST00000319432 ARID3AQ99856 593 aa9.68□□□□□ -0.86
CCDC93-201ENST00000319432 SIN3AQ96ST3 1273 aa9.68□□□□□ -0.86
CCDC93-201ENST00000319432 RSPH4AQ5TD94 716 aa9.67□□□□□ -0.86
CCDC93-201ENST00000319432 DEKP35659 375 aaKnown RBP9.67□□□□□ -0.86
CCDC93-201ENST00000319432 TRIM44Q96DX7 344 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-201ENST00000319432 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
CCDC93-201ENST00000319432 PPM1GO15355 546 aaPredicted RBP9.67□□□□□ -0.86
CCDC93-201ENST00000319432 ABCA10Q8WWZ4 1543 aa9.67□□□□□ -0.86
CCDC93-201ENST00000319432 KIAA0586Q9BVV6 1533 aa9.67□□□□□ -0.86
CCDC93-201ENST00000319432 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
CCDC93-201ENST00000319432 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
CCDC93-201ENST00000319432 UACAQ9BZF9 1416 aa9.66□□□□□ -0.86
CCDC93-201ENST00000319432 MAGI1Q96QZ7 1491 aaPredicted RBP9.66□□□□□ -0.86
CCDC93-201ENST00000319432 PEG3Q9GZU2 1588 aa9.66□□□□□ -0.86
CCDC93-201ENST00000319432 NEFMP07197 916 aa9.66□□□□□ -0.86
CCDC93-201ENST00000319432 CCDC18Q5T9S5 1454 aa9.66□□□□□ -0.86
CCDC93-201ENST00000319432 PAK3O75914 559 aaPredicted RBP9.65□□□□□ -0.86
CCDC93-201ENST00000319432 CD109Q6YHK3 1445 aa9.65□□□□□ -0.87
CCDC93-201ENST00000319432 PLB1Q6P1J6 1458 aa9.64□□□□□ -0.87
CCDC93-201ENST00000319432 CCDC9Q9Y3X0 531 aaKnown RBP9.64□□□□□ -0.87
CCDC93-201ENST00000319432 TNNT2P45379 298 aaPredicted RBP9.64□□□□□ -0.87
CCDC93-201ENST00000319432 HSPA2P54652 639 aa9.64□□□□□ -0.87
CCDC93-201ENST00000319432 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
CCDC93-201ENST00000319432 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
CCDC93-201ENST00000319432 PIP4K2BP78356 416 aa9.63□□□□□ -0.87
CCDC93-201ENST00000319432 ARHGAP35Q9NRY4 1499 aa9.62□□□□□ -0.87
CCDC93-201ENST00000319432 SRPK2P78362 688 aaKnown RBP9.62□□□□□ -0.87
CCDC93-201ENST00000319432 NCLP19338 710 aaKnown RBP9.61□□□□□ -0.87
CCDC93-201ENST00000319432 DNTTIP2Q5QJE6 756 aaKnown RBP9.61□□□□□ -0.87
CCDC93-201ENST00000319432 SLC26A8Q96RN1 970 aa9.6□□□□□ -0.87
CCDC93-201ENST00000319432 CDK11BP21127 795 aaKnown RBP9.6□□□□□ -0.87
CCDC93-201ENST00000319432 TXNDC2Q86VQ3 553 aa9.6□□□□□ -0.87
CCDC93-201ENST00000319432 CARD11Q9BXL7 1154 aa9.6□□□□□ -0.87
CCDC93-201ENST00000319432 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
CCDC93-201ENST00000319432 RBM33Q96EV2 1170 aaKnown RBP9.58□□□□□ -0.88
CCDC93-201ENST00000319432 PHF23Q9BUL5 403 aaPredicted RBP9.58□□□□□ -0.88
CCDC93-201ENST00000319432 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
CCDC93-201ENST00000319432 MPHOSPH9Q99550 1183 aa9.57□□□□□ -0.88
CCDC93-201ENST00000319432 NOP58Q9Y2X3 529 aaKnown RBP9.57□□□□□ -0.88
CCDC93-201ENST00000319432 SUPT16HQ9Y5B9 1047 aaKnown RBP9.57□□□□□ -0.88
CCDC93-201ENST00000319432 TRAK1Q9UPV9 953 aa9.57□□□□□ -0.88
CCDC93-201ENST00000319432 PTMAP06454 111 aaKnown RBP9.55□□□□□ -0.88
CCDC93-201ENST00000319432 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
CCDC93-201ENST00000319432 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
CCDC93-201ENST00000319432 NGDNQ8NEJ9 315 aaKnown RBP9.55□□□□□ -0.88
CCDC93-201ENST00000319432 ARHGAP5Q13017 1502 aa9.54□□□□□ -0.88
CCDC93-201ENST00000319432 FBXO31Q5XUX0 539 aaPredicted RBP9.54□□□□□ -0.88
CCDC93-201ENST00000319432 THEMISQ8N1K5 641 aaPredicted RBP9.54□□□□□ -0.88
CCDC93-201ENST00000319432 ASXL2Q76L83 1435 aa9.53□□□□□ -0.88
CCDC93-201ENST00000319432 ERICH6BQ5W0A0 696 aa9.53□□□□□ -0.88
CCDC93-201ENST00000319432 DDRGK1Q96HY6 314 aa9.53□□□□□ -0.88
CCDC93-201ENST00000319432 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
CCDC93-201ENST00000319432 ANKLE2Q86XL3 938 aa9.52□□□□□ -0.89
CCDC93-201ENST00000319432 CSB-PGBD3P0DP91 1061 aa9.51□□□□□ -0.89
CCDC93-201ENST00000319432 MRS2Q9HD23 443 aa9.51□□□□□ -0.89
CCDC93-201ENST00000319432 ARAP1Q96P48 1450 aa9.51□□□□□ -0.89
CCDC93-201ENST00000319432 ATF3P18847 181 aa9.51□□□□□ -0.89
CCDC93-201ENST00000319432 SPRYD3Q8NCJ5 442 aa9.51□□□□□ -0.89
CCDC93-201ENST00000319432 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
CCDC93-201ENST00000319432 WDR62O43379 1518 aa9.5□□□□□ -0.89
CCDC93-201ENST00000319432 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
CCDC93-201ENST00000319432 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
CCDC93-201ENST00000319432 POGZQ7Z3K3 1410 aa9.5□□□□□ -0.89
CCDC93-201ENST00000319432 VGFO15240 615 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 IQGAP2Q13576 1575 aa9.49□□□□□ -0.89
CCDC93-201ENST00000319432 NUTM2BA6NNL0 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 NUTM2EB1AL46 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
CCDC93-201ENST00000319432 NUTM2AQ8IVF1 878 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 TROQ12816 1431 aaPredicted RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 CDK13Q14004 1512 aaKnown RBP9.49□□□□□ -0.89
CCDC93-201ENST00000319432 ERICH3Q5RHP9 1530 aa9.49□□□□□ -0.89
CCDC93-201ENST00000319432 RBM19Q9Y4C8 960 aaKnown RBP9.48□□□□□ -0.89
CCDC93-201ENST00000319432 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
CCDC93-201ENST00000319432 MINK1Q8N4C8 1332 aaPredicted RBP9.48□□□□□ -0.89
CCDC93-201ENST00000319432 B4GALNT3Q6L9W6 998 aa9.48□□□□□ -0.89
CCDC93-201ENST00000319432 BECN1Q14457 450 aa9.48□□□□□ -0.89
CCDC93-201ENST00000319432 EIF4G3O43432 1585 aaKnown RBP9.47□□□□□ -0.89
CCDC93-201ENST00000319432 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-201ENST00000319432 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.89
CCDC93-201ENST00000319432 PHLDB1Q86UU1 1377 aa9.46□□□□□ -0.9
CCDC93-201ENST00000319432 UBAP1LF5GYI3 381 aa9.46□□□□□ -0.9
CCDC93-201ENST00000319432 TAOK2Q9UL54 1235 aa9.45□□□□□ -0.9
CCDC93-201ENST00000319432 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms