RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 CASKIN1Q8WXD9 1431 aa14.97□□□□□ -0.01
KARS-202ENST00000319410 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.01
KARS-202ENST00000319410 DENND4BO75064 1496 aaPredicted RBP14.95□□□□□ -0.02
KARS-202ENST00000319410 TROQ12816 1431 aaPredicted RBP14.94□□□□□ -0.02
KARS-202ENST00000319410 FYCO1Q9BQS8 1478 aa14.94□□□□□ -0.02
KARS-202ENST00000319410 RICTORQ6R327 1708 aa14.94□□□□□ -0.02
KARS-202ENST00000319410 PLCH2O75038 1416 aa14.94□□□□□ -0.02
KARS-202ENST00000319410 CFAP74Q9C0B2 1584 aa14.93□□□□□ -0.02
KARS-202ENST00000319410 ARID4BQ4LE39 1312 aaPredicted RBP14.92□□□□□ -0.02
KARS-202ENST00000319410 MYO5CQ9NQX4 1742 aa14.92□□□□□ -0.02
KARS-202ENST00000319410 SCAPERQ9BY12 1400 aa14.91□□□□□ -0.02
KARS-202ENST00000319410 CCDC18Q5T9S5 1454 aa14.91□□□□□ -0.02
KARS-202ENST00000319410 EFCAB2Q5VUJ9 269 aa14.89□□□□□ -0.03
KARS-202ENST00000319410 YEATS2Q9ULM3 1422 aa14.89□□□□□ -0.03
KARS-202ENST00000319410 ARHGAP5Q13017 1502 aa14.89□□□□□ -0.03
KARS-202ENST00000319410 ARHGEF40Q8TER5 1519 aa14.88□□□□□ -0.03
KARS-202ENST00000319410 VPS8Q8N3P4 1428 aa14.88□□□□□ -0.03
KARS-202ENST00000319410 POGZQ7Z3K3 1410 aa14.87□□□□□ -0.03
KARS-202ENST00000319410 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
KARS-202ENST00000319410 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
KARS-202ENST00000319410 ZFYVE16Q7Z3T8 1539 aa14.85□□□□□ -0.03
KARS-202ENST00000319410 SIGLEC1Q9BZZ2 1709 aa14.85□□□□□ -0.03
KARS-202ENST00000319410 GTF3C3Q9Y5Q9 886 aa14.85□□□□□ -0.03
KARS-202ENST00000319410 CDC42BPBQ9Y5S2 1711 aa14.85□□□□□ -0.03
KARS-202ENST00000319410 AFAP1Q8N556 730 aa14.84□□□□□ -0.03
KARS-202ENST00000319410 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
KARS-202ENST00000319410 BCORL1Q5H9F3 1711 aa14.84□□□□□ -0.03
KARS-202ENST00000319410 HECW2Q9P2P5 1572 aa14.83□□□□□ -0.03
KARS-202ENST00000319410 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
KARS-202ENST00000319410 MLECQ14165 292 aa14.83□□□□□ -0.04
KARS-202ENST00000319410 MADDQ8WXG6 1647 aa14.83□□□□□ -0.04
KARS-202ENST00000319410 MYT1LQ9UL68 1186 aa14.82□□□□□ -0.04
KARS-202ENST00000319410 PTPRMP28827 1452 aa14.82□□□□□ -0.04
KARS-202ENST00000319410 PREX2Q70Z35 1606 aa14.81□□□□□ -0.04
KARS-202ENST00000319410 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
KARS-202ENST00000319410 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
KARS-202ENST00000319410 CDC42BPAQ5VT25 1732 aa14.8□□□□□ -0.04
KARS-202ENST00000319410 MAGI2Q86UL8 1455 aa14.79□□□□□ -0.04
KARS-202ENST00000319410 ARHGEF12Q9NZN5 1544 aa14.79□□□□□ -0.04
KARS-202ENST00000319410 ZNF518AQ6AHZ1 1483 aa14.79□□□□□ -0.04
KARS-202ENST00000319410 ANP32EQ9BTT0 268 aa14.78□□□□□ -0.04
KARS-202ENST00000319410 TRAPPC8Q9Y2L5 1435 aa14.78□□□□□ -0.04
KARS-202ENST00000319410 RIMS1Q86UR5 1692 aaKnown RBP14.78□□□□□ -0.04
KARS-202ENST00000319410 NEUROD1Q13562 356 aa14.77□□□□□ -0.04
KARS-202ENST00000319410 MTUS2Q5JR59 1369 aa14.77□□□□□ -0.04
KARS-202ENST00000319410 ABCC1P33527 1531 aa14.77□□□□□ -0.05
KARS-202ENST00000319410 ATP10AO60312 1499 aa14.76□□□□□ -0.05
KARS-202ENST00000319410 GPATCH8Q9UKJ3 1502 aaKnown RBP14.76□□□□□ -0.05
KARS-202ENST00000319410 KDM5CP41229 1560 aa14.76□□□□□ -0.05
KARS-202ENST00000319410 ITSN2Q9NZM3 1697 aa14.74□□□□□ -0.05
KARS-202ENST00000319410 TIAM1Q13009 1591 aa14.74□□□□□ -0.05
KARS-202ENST00000319410 SAMD9LQ8IVG5 1584 aa14.74□□□□□ -0.05
KARS-202ENST00000319410 C9orf84Q5VXU9 1444 aa14.74□□□□□ -0.05
KARS-202ENST00000319410 HNRNPMP52272 730 aaKnown RBP eCLIP14.73□□□□□ -0.05
KARS-202ENST00000319410 CCNB3Q8WWL7 1395 aa14.73□□□□□ -0.05
KARS-202ENST00000319410 DIP2CQ9Y2E4 1556 aa14.72□□□□□ -0.05
KARS-202ENST00000319410 CFDP1Q9UEE9 299 aaPredicted RBP14.72□□□□□ -0.05
KARS-202ENST00000319410 EHBP1L1Q8N3D4 1523 aa14.72□□□□□ -0.05
KARS-202ENST00000319410 SYCP2Q9BX26 1530 aa14.72□□□□□ -0.05
KARS-202ENST00000319410 ABCA6Q8N139 1617 aa14.72□□□□□ -0.05
KARS-202ENST00000319410 DAXXQ9UER7 740 aaPredicted RBP14.72□□□□□ -0.05
KARS-202ENST00000319410 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
KARS-202ENST00000319410 ZNF644Q9H582 1327 aaPredicted RBP14.7□□□□□ -0.06
KARS-202ENST00000319410 MLH3Q9UHC1 1453 aa14.69□□□□□ -0.06
KARS-202ENST00000319410 CEBPAP49715 358 aaPredicted RBP14.68□□□□□ -0.06
KARS-202ENST00000319410 LRRC9Q6ZRR7 1453 aa14.68□□□□□ -0.06
KARS-202ENST00000319410 KIDINS220Q9ULH0 1771 aa14.68□□□□□ -0.06
KARS-202ENST00000319410 LMTK3Q96Q04 1460 aa14.66□□□□□ -0.06
KARS-202ENST00000319410 HSPA2P54652 639 aa14.66□□□□□ -0.06
KARS-202ENST00000319410 SPAG9O60271 1321 aaKnown RBP14.66□□□□□ -0.06
KARS-202ENST00000319410 SUPT6HQ7KZ85 1726 aaKnown RBP14.64□□□□□ -0.07
KARS-202ENST00000319410 NCOA2Q15596 1464 aa14.64□□□□□ -0.07
KARS-202ENST00000319410 KIAA1107Q9UPP5 1409 aa14.62□□□□□ -0.07
KARS-202ENST00000319410 REREQ9P2R6 1566 aa14.62□□□□□ -0.07
KARS-202ENST00000319410 KANK4Q5T7N3 995 aaPredicted RBP14.62□□□□□ -0.07
KARS-202ENST00000319410 ATP7AQ04656 1500 aa14.61□□□□□ -0.07
KARS-202ENST00000319410 PLEKHH2Q8IVE3 1493 aa14.61□□□□□ -0.07
KARS-202ENST00000319410 INO80Q9ULG1 1556 aaPredicted RBP14.59□□□□□ -0.07
KARS-202ENST00000319410 MBD5Q9P267 1494 aa14.59□□□□□ -0.07
KARS-202ENST00000319410 AGLP35573 1532 aa14.59□□□□□ -0.07
KARS-202ENST00000319410 ESF1Q9H501 851 aaKnown RBP14.58□□□□□ -0.07
KARS-202ENST00000319410 ILDR1Q86SU0 546 aaPredicted RBP14.58□□□□□ -0.08
KARS-202ENST00000319410 CAMSAP2Q08AD1 1489 aa14.57□□□□□ -0.08
KARS-202ENST00000319410 A2MP01023 1474 aa14.56□□□□□ -0.08
KARS-202ENST00000319410 C3P01024 1663 aa14.56□□□□□ -0.08
KARS-202ENST00000319410 GGT6Q6P531 493 aa14.55□□□□□ -0.08
KARS-202ENST00000319410 MIA2Q96PC5 1412 aa14.54□□□□□ -0.08
KARS-202ENST00000319410 PLXNC1O60486 1568 aa14.54□□□□□ -0.08
KARS-202ENST00000319410 PREX1Q8TCU6 1659 aa14.53□□□□□ -0.08
KARS-202ENST00000319410 EIF5BO60841 1220 aaKnown RBP14.53□□□□□ -0.08
KARS-202ENST00000319410 MYOM3Q5VTT5 1437 aa14.53□□□□□ -0.08
KARS-202ENST00000319410 CCDC141Q6ZP82 1450 aa14.52□□□□□ -0.08
KARS-202ENST00000319410 ADGBQ8N7X0 1667 aa14.5□□□□□ -0.09
KARS-202ENST00000319410 CLTCQ00610 1675 aaKnown RBP14.5□□□□□ -0.09
KARS-202ENST00000319410 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
KARS-202ENST00000319410 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
KARS-202ENST00000319410 ZMYM3Q14202 1370 aa14.49□□□□□ -0.09
KARS-202ENST00000319410 RTEL1-TNFRSF6BF6WH68 1400 aa14.48□□□□□ -0.09
KARS-202ENST00000319410 CNTLNQ9NXG0 1405 aa14.48□□□□□ -0.09
KARS-202ENST00000319410 KIF3BO15066 747 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms