RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 POGZQ7Z3K3 1410 aa32.88■■■□□ 2.85
SERF1A-201ENST00000317633 CLIP1P30622 1438 aa32.87■■■□□ 2.85
SERF1A-201ENST00000317633 TROQ12816 1431 aaPredicted RBP32.86■■■□□ 2.85
SERF1A-201ENST00000317633 ILDR1Q86SU0 546 aaPredicted RBP32.85■■■□□ 2.85
SERF1A-201ENST00000317633 LRRIQ1Q96JM4 1722 aa32.84■■■□□ 2.85
SERF1A-201ENST00000317633 YEATS2Q9ULM3 1422 aa32.84■■■□□ 2.85
SERF1A-201ENST00000317633 RIMS1Q86UR5 1692 aaKnown RBP32.82■■■□□ 2.84
SERF1A-201ENST00000317633 ARHGAP5Q13017 1502 aa32.77■■■□□ 2.84
SERF1A-201ENST00000317633 CASKIN1Q8WXD9 1431 aa32.77■■■□□ 2.84
SERF1A-201ENST00000317633 CCDC18Q5T9S5 1454 aa32.76■■■□□ 2.84
SERF1A-201ENST00000317633 PCF11O94913 1555 aaKnown RBP32.74■■■□□ 2.83
SERF1A-201ENST00000317633 SIGLEC1Q9BZZ2 1709 aa32.74■■■□□ 2.83
SERF1A-201ENST00000317633 ZNF518AQ6AHZ1 1483 aa32.73■■■□□ 2.83
SERF1A-201ENST00000317633 ATP10AO60312 1499 aa32.72■■■□□ 2.83
SERF1A-201ENST00000317633 C9orf84Q5VXU9 1444 aa32.68■■■□□ 2.82
SERF1A-201ENST00000317633 CDC42BPBQ9Y5S2 1711 aa32.68■■■□□ 2.82
SERF1A-201ENST00000317633 MLECQ14165 292 aa32.68■■■□□ 2.82
SERF1A-201ENST00000317633 FER1L4A9Z1Z3 1794 aa32.68■■■□□ 2.82
SERF1A-201ENST00000317633 LMTK3Q96Q04 1460 aa32.66■■■□□ 2.82
SERF1A-201ENST00000317633 KDM5CP41229 1560 aa32.64■■■□□ 2.82
SERF1A-201ENST00000317633 FYCO1Q9BQS8 1478 aa32.64■■■□□ 2.82
SERF1A-201ENST00000317633 PREX2Q70Z35 1606 aa32.63■■■□□ 2.81
SERF1A-201ENST00000317633 PLPPR3Q6T4P5 718 aa32.62■■■□□ 2.81
SERF1A-201ENST00000317633 AFAP1Q8N556 730 aa32.62■■■□□ 2.81
SERF1A-201ENST00000317633 MYT1LQ9UL68 1186 aa32.62■■■□□ 2.81
SERF1A-201ENST00000317633 ARHGEF12Q9NZN5 1544 aa32.58■■■□□ 2.81
SERF1A-201ENST00000317633 CDC42BPAQ5VT25 1732 aa32.54■■■□□ 2.8
SERF1A-201ENST00000317633 ABCC1P33527 1531 aa32.53■■■□□ 2.8
SERF1A-201ENST00000317633 MLH3Q9UHC1 1453 aa32.53■■■□□ 2.8
SERF1A-201ENST00000317633 DIP2CQ9Y2E4 1556 aa32.52■■■□□ 2.8
SERF1A-201ENST00000317633 ITSN2Q9NZM3 1697 aa32.52■■■□□ 2.8
SERF1A-201ENST00000317633 REREQ9P2R6 1566 aa32.5■■■□□ 2.79
SERF1A-201ENST00000317633 TRAPPC8Q9Y2L5 1435 aa32.48■■■□□ 2.79
SERF1A-201ENST00000317633 HSPA2P54652 639 aa32.47■■■□□ 2.79
SERF1A-201ENST00000317633 ABCA6Q8N139 1617 aa32.46■■■□□ 2.79
SERF1A-201ENST00000317633 FBXO41Q8TF61 875 aa32.42■■■□□ 2.78
SERF1A-201ENST00000317633 PREX1Q8TCU6 1659 aa32.41■■■□□ 2.78
SERF1A-201ENST00000317633 ZNF777Q9ULD5 760 aaPredicted RBP32.41■■■□□ 2.78
SERF1A-201ENST00000317633 AGLP35573 1532 aa32.39■■■□□ 2.78
SERF1A-201ENST00000317633 GPATCH8Q9UKJ3 1502 aaKnown RBP32.39■■■□□ 2.78
SERF1A-201ENST00000317633 KIDINS220Q9ULH0 1771 aa32.39■■■□□ 2.78
SERF1A-201ENST00000317633 CEBPAP49715 358 aaPredicted RBP32.38■■■□□ 2.77
SERF1A-201ENST00000317633 SETD1BQ9UPS6 1966 aaKnown RBP32.38■■■□□ 2.77
SERF1A-201ENST00000317633 SAMD9LQ8IVG5 1584 aa32.36■■■□□ 2.77
SERF1A-201ENST00000317633 ESF1Q9H501 851 aaKnown RBP32.36■■■□□ 2.77
SERF1A-201ENST00000317633 MTUS2Q5JR59 1369 aa32.34■■■□□ 2.77
SERF1A-201ENST00000317633 CCNB3Q8WWL7 1395 aa32.32■■■□□ 2.77
SERF1A-201ENST00000317633 SYCP2Q9BX26 1530 aa32.32■■■□□ 2.76
SERF1A-201ENST00000317633 CFDP1Q9UEE9 299 aaPredicted RBP32.32■■■□□ 2.76
SERF1A-201ENST00000317633 PLEKHH2Q8IVE3 1493 aa32.31■■■□□ 2.76
SERF1A-201ENST00000317633 SPAG9O60271 1321 aaKnown RBP32.29■■■□□ 2.76
SERF1A-201ENST00000317633 KIAA1107Q9UPP5 1409 aa32.28■■■□□ 2.76
SERF1A-201ENST00000317633 HNRNPMP52272 730 aaKnown RBP eCLIP32.28■■■□□ 2.76
SERF1A-201ENST00000317633 C3P01024 1663 aa32.27■■■□□ 2.76
SERF1A-201ENST00000317633 UHRF1BP1Q6BDS2 1440 aa32.26■■■□□ 2.76
SERF1A-201ENST00000317633 CNTLNQ9NXG0 1405 aa32.24■■■□□ 2.75
SERF1A-201ENST00000317633 EHBP1L1Q8N3D4 1523 aa32.22■■■□□ 2.75
SERF1A-201ENST00000317633 CEP162Q5TB80 1403 aa32.22■■■□□ 2.75
SERF1A-201ENST00000317633 ATP7AQ04656 1500 aa32.21■■■□□ 2.75
SERF1A-201ENST00000317633 DMRT2Q9Y5R5 561 aa32.19■■■□□ 2.74
SERF1A-201ENST00000317633 SUPT6HQ7KZ85 1726 aaKnown RBP32.18■■■□□ 2.74
SERF1A-201ENST00000317633 INO80Q9ULG1 1556 aaPredicted RBP32.17■■■□□ 2.74
SERF1A-201ENST00000317633 TIAM1Q13009 1591 aa32.15■■■□□ 2.74
SERF1A-201ENST00000317633 MROH2AA6NES4 1674 aa32.14■■■□□ 2.74
SERF1A-201ENST00000317633 STRCQ7RTU9 1775 aa32.13■■■□□ 2.73
SERF1A-201ENST00000317633 A2MP01023 1474 aa32.11■■■□□ 2.73
SERF1A-201ENST00000317633 CERKQ8TCT0 537 aa32.11■■■□□ 2.73
SERF1A-201ENST00000317633 PLXNC1O60486 1568 aa32.1■■■□□ 2.73
SERF1A-201ENST00000317633 ADGBQ8N7X0 1667 aa32.08■■■□□ 2.73
SERF1A-201ENST00000317633 ZNF644Q9H582 1327 aaPredicted RBP32.06■■■□□ 2.72
SERF1A-201ENST00000317633 ZMYM3Q14202 1370 aa32.06■■■□□ 2.72
SERF1A-201ENST00000317633 NPATQ14207 1427 aa32.05■■■□□ 2.72
SERF1A-201ENST00000317633 MBD5Q9P267 1494 aa32.03■■■□□ 2.72
SERF1A-201ENST00000317633 CLTCQ00610 1675 aaKnown RBP32.02■■■□□ 2.72
SERF1A-201ENST00000317633 RTEL1-TNFRSF6BF6WH68 1400 aa32.01■■■□□ 2.72
SERF1A-201ENST00000317633 NCOA2Q15596 1464 aa32■■■□□ 2.71
SERF1A-201ENST00000317633 GGT6Q6P531 493 aa32■■■□□ 2.71
SERF1A-201ENST00000317633 PPP6R1Q9UPN7 881 aa32■■■□□ 2.71
SERF1A-201ENST00000317633 PTPRTO14522 1441 aa31.99■■■□□ 2.71
SERF1A-201ENST00000317633 RSPH4AQ5TD94 716 aa31.96■■■□□ 2.71
SERF1A-201ENST00000317633 CCDC141Q6ZP82 1450 aa31.93■■■□□ 2.7
SERF1A-201ENST00000317633 CAMSAP2Q08AD1 1489 aa31.92■■■□□ 2.7
SERF1A-201ENST00000317633 DHX29Q7Z478 1369 aaKnown RBP31.92■■■□□ 2.7
SERF1A-201ENST00000317633 NCOA1Q15788 1441 aa31.92■■■□□ 2.7
SERF1A-201ENST00000317633 VPS8Q8N3P4 1428 aa31.92■■■□□ 2.7
SERF1A-201ENST00000317633 CAMSAP1Q5T5Y3 1602 aa31.89■■■□□ 2.7
SERF1A-201ENST00000317633 LOC105371045A0A1W2PR82 267 aa31.88■■■□□ 2.69
SERF1A-201ENST00000317633 PTPRKQ15262 1439 aa31.88■■■□□ 2.69
SERF1A-201ENST00000317633 MYO3AQ8NEV4 1616 aa31.86■■■□□ 2.69
SERF1A-201ENST00000317633 ZNF142P52746 1687 aaPredicted RBP31.86■■■□□ 2.69
SERF1A-201ENST00000317633 LRRC9Q6ZRR7 1453 aa31.84■■■□□ 2.69
SERF1A-201ENST00000317633 ARHGEF5Q12774 1597 aa31.83■■■□□ 2.69
SERF1A-201ENST00000317633 TSPY4P0CV99 314 aa31.82■■■□□ 2.68
SERF1A-201ENST00000317633 TSPY10P0CW01 314 aa31.82■■■□□ 2.68
SERF1A-201ENST00000317633 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
SERF1A-201ENST00000317633 KIF3BO15066 747 aa31.81■■■□□ 2.68
SERF1A-201ENST00000317633 MAP3K1Q13233 1512 aa31.78■■■□□ 2.68
SERF1A-201ENST00000317633 FAM135AQ9P2D6 1515 aa31.78■■■□□ 2.68
SERF1A-201ENST00000317633 PLA2R1Q13018 1463 aa31.78■■■□□ 2.68
SERF1A-201ENST00000317633 PKD2Q13563 968 aa31.76■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms