RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.84□□□□□ -0.67
NPHP1-201ENST00000316534 DAPK1P53355 1430 aa10.84□□□□□ -0.67
NPHP1-201ENST00000316534 DENND4BO75064 1496 aaPredicted RBP10.83□□□□□ -0.68
NPHP1-201ENST00000316534 PTPRGP23470 1445 aa10.83□□□□□ -0.68
NPHP1-201ENST00000316534 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
NPHP1-201ENST00000316534 ABCA9Q8IUA7 1624 aa10.82□□□□□ -0.68
NPHP1-201ENST00000316534 PLXNC1O60486 1568 aa10.82□□□□□ -0.68
NPHP1-201ENST00000316534 ABCC5O15440 1437 aa10.82□□□□□ -0.68
NPHP1-201ENST00000316534 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.81□□□□□ -0.68
NPHP1-201ENST00000316534 MBD5Q9P267 1494 aa10.79□□□□□ -0.68
NPHP1-201ENST00000316534 ACIN1Q9UKV3 1341 aaKnown RBP10.79□□□□□ -0.68
NPHP1-201ENST00000316534 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.68
NPHP1-201ENST00000316534 UNC13BO14795 1591 aa10.77□□□□□ -0.69
NPHP1-201ENST00000316534 HNRNPUL2Q1KMD3 747 aaKnown RBP10.76□□□□□ -0.69
NPHP1-201ENST00000316534 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
NPHP1-201ENST00000316534 CCER1Q8TC90 406 aaPredicted RBP10.75□□□□□ -0.69
NPHP1-201ENST00000316534 ABCC1P33527 1531 aa10.75□□□□□ -0.69
NPHP1-201ENST00000316534 KIAA1107Q9UPP5 1409 aa10.75□□□□□ -0.69
NPHP1-201ENST00000316534 MAGI2Q86UL8 1455 aa10.74□□□□□ -0.69
NPHP1-201ENST00000316534 BCORL1Q5H9F3 1711 aa10.73□□□□□ -0.69
NPHP1-201ENST00000316534 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
NPHP1-201ENST00000316534 PLEKHH2Q8IVE3 1493 aa10.72□□□□□ -0.69
NPHP1-201ENST00000316534 DEPDC5O75140 1603 aa10.72□□□□□ -0.69
NPHP1-201ENST00000316534 INO80Q9ULG1 1556 aaPredicted RBP10.72□□□□□ -0.69
NPHP1-201ENST00000316534 FBLN2P98095 1184 aa10.71□□□□□ -0.69
NPHP1-201ENST00000316534 TIMELESSQ9UNS1 1208 aa10.71□□□□□ -0.69
NPHP1-201ENST00000316534 CFAP74Q9C0B2 1584 aa10.71□□□□□ -0.69
NPHP1-201ENST00000316534 PLCH2O75038 1416 aa10.71□□□□□ -0.7
NPHP1-201ENST00000316534 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
NPHP1-201ENST00000316534 PZPP20742 1482 aa10.7□□□□□ -0.7
NPHP1-201ENST00000316534 CCDC141Q6ZP82 1450 aa10.7□□□□□ -0.7
NPHP1-201ENST00000316534 IQGAP3Q86VI3 1631 aa10.7□□□□□ -0.7
NPHP1-201ENST00000316534 EIF2AK4Q9P2K8 1649 aaKnown RBP10.68□□□□□ -0.7
NPHP1-201ENST00000316534 GLI2P10070 1586 aa10.68□□□□□ -0.7
NPHP1-201ENST00000316534 ARHGEF12Q9NZN5 1544 aa10.68□□□□□ -0.7
NPHP1-201ENST00000316534 MAP3K4Q9Y6R4 1608 aa10.67□□□□□ -0.7
NPHP1-201ENST00000316534 SYCP2Q9BX26 1530 aa10.67□□□□□ -0.7
NPHP1-201ENST00000316534 FAM50AQ14320 339 aaKnown RBP10.66□□□□□ -0.7
NPHP1-201ENST00000316534 ATP1B4Q9UN42 357 aaPredicted RBP10.66□□□□□ -0.7
NPHP1-201ENST00000316534 ZFYVE16Q7Z3T8 1539 aa10.65□□□□□ -0.7
NPHP1-201ENST00000316534 PLEKHD1A6NEE1 506 aa10.65□□□□□ -0.7
NPHP1-201ENST00000316534 C9orf84Q5VXU9 1444 aa10.65□□□□□ -0.7
NPHP1-201ENST00000316534 VWDEQ8N2E2 1590 aa10.65□□□□□ -0.7
NPHP1-201ENST00000316534 POLR1AO95602 1720 aaPredicted RBP10.65□□□□□ -0.7
NPHP1-201ENST00000316534 RTEL1-TNFRSF6BF6WH68 1400 aa10.65□□□□□ -0.71
NPHP1-201ENST00000316534 KDM5CP41229 1560 aa10.64□□□□□ -0.71
NPHP1-201ENST00000316534 RIMBP3CA6NJZ7 1639 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 RIMBP3BA6NNM3 1639 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 RIMBP3Q9UFD9 1639 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 ARHGAP5Q13017 1502 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 DUOX2Q9NRD8 1548 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 NEURL4Q96JN8 1562 aa10.63□□□□□ -0.71
NPHP1-201ENST00000316534 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
NPHP1-201ENST00000316534 RPRD2Q5VT52 1461 aaKnown RBP10.62□□□□□ -0.71
NPHP1-201ENST00000316534 TEX14Q8IWB6 1497 aa10.62□□□□□ -0.71
NPHP1-201ENST00000316534 ERBINQ96RT1 1412 aa10.61□□□□□ -0.71
NPHP1-201ENST00000316534 RNF17Q9BXT8 1623 aaKnown RBP10.61□□□□□ -0.71
NPHP1-201ENST00000316534 ATP10AO60312 1499 aa10.6□□□□□ -0.71
NPHP1-201ENST00000316534 ANKRD30BQ9BXX2 1392 aa10.6□□□□□ -0.71
NPHP1-201ENST00000316534 ANKRD30AQ9BXX3 1397 aa10.6□□□□□ -0.71
NPHP1-201ENST00000316534 MROH1Q8NDA8 1641 aa10.6□□□□□ -0.71
NPHP1-201ENST00000316534 KIDINS220Q9ULH0 1771 aa10.6□□□□□ -0.71
NPHP1-201ENST00000316534 CFDP1Q9UEE9 299 aaPredicted RBP10.6□□□□□ -0.71
NPHP1-201ENST00000316534 PPRC1Q5VV67 1664 aaKnown RBP10.59□□□□□ -0.71
NPHP1-201ENST00000316534 ASXL2Q76L83 1435 aa10.59□□□□□ -0.71
NPHP1-201ENST00000316534 OSCARQ8IYS5 282 aa10.59□□□□□ -0.71
NPHP1-201ENST00000316534 RICTORQ6R327 1708 aa10.58□□□□□ -0.72
NPHP1-201ENST00000316534 ANKRD50Q9ULJ7 1429 aa10.57□□□□□ -0.72
NPHP1-201ENST00000316534 PRDM15P57071 1507 aaPredicted RBP10.57□□□□□ -0.72
NPHP1-201ENST00000316534 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
NPHP1-201ENST00000316534 LAMC1P11047 1609 aa10.56□□□□□ -0.72
NPHP1-201ENST00000316534 TET3O43151 1660 aa10.56□□□□□ -0.72
NPHP1-201ENST00000316534 ATP7AQ04656 1500 aa10.56□□□□□ -0.72
NPHP1-201ENST00000316534 LMTK2Q8IWU2 1503 aa10.55□□□□□ -0.72
NPHP1-201ENST00000316534 CEP152O94986 1710 aa10.54□□□□□ -0.72
NPHP1-201ENST00000316534 NEO1Q92859 1461 aa10.54□□□□□ -0.72
NPHP1-201ENST00000316534 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
NPHP1-201ENST00000316534 E9PCH4 1651 aa10.54□□□□□ -0.72
NPHP1-201ENST00000316534 DIP2BQ9P265 1576 aa10.54□□□□□ -0.72
NPHP1-201ENST00000316534 FRMPD1Q5SYB0 1578 aa10.54□□□□□ -0.72
NPHP1-201ENST00000316534 ZMYM4Q5VZL5 1548 aa10.53□□□□□ -0.72
NPHP1-201ENST00000316534 ITGAEP38570 1179 aa10.53□□□□□ -0.72
NPHP1-201ENST00000316534 FANCAO15360 1455 aa10.53□□□□□ -0.72
NPHP1-201ENST00000316534 UHRF1BP1Q6BDS2 1440 aa10.53□□□□□ -0.72
NPHP1-201ENST00000316534 TRAPPC8Q9Y2L5 1435 aa10.53□□□□□ -0.72
NPHP1-201ENST00000316534 REREQ9P2R6 1566 aa10.52□□□□□ -0.72
NPHP1-201ENST00000316534 KIF15Q9NS87 1388 aa10.52□□□□□ -0.72
NPHP1-201ENST00000316534 SPHKAPQ2M3C7 1700 aa10.52□□□□□ -0.72
NPHP1-201ENST00000316534 HECW2Q9P2P5 1572 aa10.52□□□□□ -0.73
NPHP1-201ENST00000316534 MLH3Q9UHC1 1453 aa10.52□□□□□ -0.73
NPHP1-201ENST00000316534 IFT172Q9UG01 1749 aa10.51□□□□□ -0.73
NPHP1-201ENST00000316534 MPHOSPH9Q99550 1183 aa10.51□□□□□ -0.73
NPHP1-201ENST00000316534 KIF13AQ9H1H9 1805 aa10.51□□□□□ -0.73
NPHP1-201ENST00000316534 PPP1R15AO75807 674 aaPredicted RBP10.51□□□□□ -0.73
NPHP1-201ENST00000316534 ARID3CA6NKF2 412 aa10.51□□□□□ -0.73
NPHP1-201ENST00000316534 ABCA6Q8N139 1617 aa10.5□□□□□ -0.73
NPHP1-201ENST00000316534 ZC3H13Q5T200 1668 aaKnown RBP10.5□□□□□ -0.73
NPHP1-201ENST00000316534 RRP7BPQ9NSQ0 103 aa10.49□□□□□ -0.73
NPHP1-201ENST00000316534 TRPM2O94759 1503 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms