RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 KIAA0556O60303 1618 aa11.88□□□□□ -0.51
C2CD3-201ENST00000313663 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
C2CD3-201ENST00000313663 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
C2CD3-201ENST00000313663 FGD6Q6ZV73 1430 aa11.88□□□□□ -0.51
C2CD3-201ENST00000313663 CEP170Q5SW79 1584 aa11.87□□□□□ -0.51
C2CD3-201ENST00000313663 NCOA2Q15596 1464 aa11.87□□□□□ -0.51
C2CD3-201ENST00000313663 HAP1P54257 671 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-201ENST00000313663 AMER1Q5JTC6 1135 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-201ENST00000313663 KDM2AQ9Y2K7 1162 aa11.87□□□□□ -0.51
C2CD3-201ENST00000313663 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.86□□□□□ -0.51
C2CD3-201ENST00000313663 ARXQ96QS3 562 aa11.86□□□□□ -0.51
C2CD3-201ENST00000313663 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
C2CD3-201ENST00000313663 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
C2CD3-201ENST00000313663 MYOM3Q5VTT5 1437 aa11.86□□□□□ -0.51
C2CD3-201ENST00000313663 PLEKHG5O94827 1062 aa11.85□□□□□ -0.51
C2CD3-201ENST00000313663 DHX57Q6P158 1386 aaKnown RBP11.84□□□□□ -0.51
C2CD3-201ENST00000313663 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
C2CD3-201ENST00000313663 RAB3GAP2Q9H2M9 1393 aa11.83□□□□□ -0.52
C2CD3-201ENST00000313663 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
C2CD3-201ENST00000313663 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
C2CD3-201ENST00000313663 SETD5Q9C0A6 1442 aa11.83□□□□□ -0.52
C2CD3-201ENST00000313663 SUPT6HQ7KZ85 1726 aaKnown RBP11.82□□□□□ -0.52
C2CD3-201ENST00000313663 NUP153P49790 1475 aaKnown RBP11.81□□□□□ -0.52
C2CD3-201ENST00000313663 FKBP8Q14318 412 aa11.81□□□□□ -0.52
C2CD3-201ENST00000313663 KCNH8Q96L42 1107 aa11.81□□□□□ -0.52
C2CD3-201ENST00000313663 MRS2Q9HD23 443 aa11.81□□□□□ -0.52
C2CD3-201ENST00000313663 ACIN1Q9UKV3 1341 aaKnown RBP11.81□□□□□ -0.52
C2CD3-201ENST00000313663 PLEKHD1A6NEE1 506 aa11.81□□□□□ -0.52
C2CD3-201ENST00000313663 ARID4BQ4LE39 1312 aaPredicted RBP11.8□□□□□ -0.52
C2CD3-201ENST00000313663 MAGI3Q5TCQ9 1506 aa11.8□□□□□ -0.52
C2CD3-201ENST00000313663 PLB1Q6P1J6 1458 aa11.79□□□□□ -0.52
C2CD3-201ENST00000313663 RAPGEF6Q8TEU7 1601 aa11.79□□□□□ -0.52
C2CD3-201ENST00000313663 PRG4Q92954 1404 aaPredicted RBP11.79□□□□□ -0.52
C2CD3-201ENST00000313663 LRRIQ1Q96JM4 1722 aa11.79□□□□□ -0.52
C2CD3-201ENST00000313663 PTPRGP23470 1445 aa11.77□□□□□ -0.53
C2CD3-201ENST00000313663 ARHGEF11O15085 1522 aa11.76□□□□□ -0.53
C2CD3-201ENST00000313663 MIA2Q96PC5 1412 aa11.76□□□□□ -0.53
C2CD3-201ENST00000313663 TROQ12816 1431 aaPredicted RBP11.75□□□□□ -0.53
C2CD3-201ENST00000313663 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
C2CD3-201ENST00000313663 SENP3Q9H4L4 574 aaPredicted RBP11.73□□□□□ -0.53
C2CD3-201ENST00000313663 EIF4G2P78344 907 aaKnown RBP eCLIP11.73□□□□□ -0.53
C2CD3-201ENST00000313663 CDCA8Q53HL2 280 aa11.73□□□□□ -0.53
C2CD3-201ENST00000313663 PTPN23Q9H3S7 1636 aa11.73□□□□□ -0.53
C2CD3-201ENST00000313663 HFM1A2PYH4 1435 aa11.72□□□□□ -0.53
C2CD3-201ENST00000313663 LMOD2Q6P5Q4 547 aa11.72□□□□□ -0.53
C2CD3-201ENST00000313663 CFDP1Q9UEE9 299 aaPredicted RBP11.72□□□□□ -0.53
C2CD3-201ENST00000313663 PTPRKQ15262 1439 aa11.71□□□□□ -0.53
C2CD3-201ENST00000313663 TCOF1Q13428 1488 aaKnown RBP11.71□□□□□ -0.53
C2CD3-201ENST00000313663 CHD1O14646 1710 aa11.71□□□□□ -0.54
C2CD3-201ENST00000313663 RGL3Q3MIN7 710 aa11.71□□□□□ -0.54
C2CD3-201ENST00000313663 NBR1Q14596 966 aa11.7□□□□□ -0.54
C2CD3-201ENST00000313663 RRP7BPQ9NSQ0 103 aa11.7□□□□□ -0.54
C2CD3-201ENST00000313663 ABCA8O94911 1581 aa11.69□□□□□ -0.54
C2CD3-201ENST00000313663 NCLP19338 710 aaKnown RBP11.69□□□□□ -0.54
C2CD3-201ENST00000313663 GLIPR1L2Q4G1C9 344 aa11.68□□□□□ -0.54
C2CD3-201ENST00000313663 NAIPQ13075 1403 aa11.68□□□□□ -0.54
C2CD3-201ENST00000313663 NPHP1O15259 732 aa11.68□□□□□ -0.54
C2CD3-201ENST00000313663 PPM1GO15355 546 aaPredicted RBP11.68□□□□□ -0.54
C2CD3-201ENST00000313663 ATP10BO94823 1461 aa11.68□□□□□ -0.54
C2CD3-201ENST00000313663 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
C2CD3-201ENST00000313663 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
C2CD3-201ENST00000313663 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
C2CD3-201ENST00000313663 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
C2CD3-201ENST00000313663 AKNAQ7Z591 1439 aa11.65□□□□□ -0.54
C2CD3-201ENST00000313663 MAPKBP1O60336 1514 aa11.65□□□□□ -0.55
C2CD3-201ENST00000313663 GOLGA6L22H0YM25 854 aa11.64□□□□□ -0.55
C2CD3-201ENST00000313663 POGKQ9P215 609 aa11.64□□□□□ -0.55
C2CD3-201ENST00000313663 NUDCQ9Y266 331 aa11.64□□□□□ -0.55
C2CD3-201ENST00000313663 GPATCH8Q9UKJ3 1502 aaKnown RBP11.64□□□□□ -0.55
C2CD3-201ENST00000313663 SHROOM2Q13796 1616 aa11.63□□□□□ -0.55
C2CD3-201ENST00000313663 DAPK1P53355 1430 aa11.63□□□□□ -0.55
C2CD3-201ENST00000313663 SIN3AQ96ST3 1273 aa11.63□□□□□ -0.55
C2CD3-201ENST00000313663 BECN1Q14457 450 aa11.63□□□□□ -0.55
C2CD3-201ENST00000313663 RTN4Q9NQC3 1192 aaKnown RBP11.63□□□□□ -0.55
C2CD3-201ENST00000313663 TIMELESSQ9UNS1 1208 aa11.63□□□□□ -0.55
C2CD3-201ENST00000313663 ANP32EQ9BTT0 268 aa11.62□□□□□ -0.55
C2CD3-201ENST00000313663 MAPK8IP3Q9UPT6 1336 aa11.62□□□□□ -0.55
C2CD3-201ENST00000313663 ABCC5O15440 1437 aa11.61□□□□□ -0.55
C2CD3-201ENST00000313663 ROCK1Q13464 1354 aa11.61□□□□□ -0.55
C2CD3-201ENST00000313663 KIF14Q15058 1648 aa11.61□□□□□ -0.55
C2CD3-201ENST00000313663 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
C2CD3-201ENST00000313663 TRHP20396 242 aaPredicted RBP11.6□□□□□ -0.55
C2CD3-201ENST00000313663 CLASP1Q7Z460 1538 aa11.6□□□□□ -0.55
C2CD3-201ENST00000313663 ITSN2Q9NZM3 1697 aa11.59□□□□□ -0.55
C2CD3-201ENST00000313663 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
C2CD3-201ENST00000313663 ADCY10Q96PN6 1610 aa11.59□□□□□ -0.55
C2CD3-201ENST00000313663 HIRIP3Q9BW71 556 aaPredicted RBP11.59□□□□□ -0.55
C2CD3-201ENST00000313663 ABCC2Q92887 1545 aa11.59□□□□□ -0.55
C2CD3-201ENST00000313663 HDGFP51858 240 aaKnown RBP11.58□□□□□ -0.56
C2CD3-201ENST00000313663 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
C2CD3-201ENST00000313663 CASC1Q6TDU7 716 aa11.58□□□□□ -0.56
C2CD3-201ENST00000313663 ABCC10Q5T3U5 1492 aa11.58□□□□□ -0.56
C2CD3-201ENST00000313663 DNMT1P26358 1616 aaKnown RBP11.57□□□□□ -0.56
C2CD3-201ENST00000313663 NEUROD2Q15784 382 aa11.57□□□□□ -0.56
C2CD3-201ENST00000313663 CHMP4BQ9H444 224 aaKnown RBP11.57□□□□□ -0.56
C2CD3-201ENST00000313663 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
C2CD3-201ENST00000313663 ANKRD30AQ9BXX3 1397 aa11.56□□□□□ -0.56
C2CD3-201ENST00000313663 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
C2CD3-201ENST00000313663 TULP1O00294 542 aaPredicted RBP11.56□□□□□ -0.56
C2CD3-201ENST00000313663 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms