RNA–Protein interactions for RNA: ENST00000312423.2

SWSAP1-201, Transcript of SWIM-type zinc finger 7 associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SWSAP1, Length 1,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1-201ENST00000312423 CDC42BPBQ9Y5S2 1711 aa27.32■■□□□ 1.96
SWSAP1-201ENST00000312423 NCOA2Q15596 1464 aa27.32■■□□□ 1.96
SWSAP1-201ENST00000312423 EFCAB2Q5VUJ9 269 aa27.3■■□□□ 1.96
SWSAP1-201ENST00000312423 PHLDB1Q86UU1 1377 aa27.29■■□□□ 1.96
SWSAP1-201ENST00000312423 AKNAQ7Z591 1439 aa27.28■■□□□ 1.96
SWSAP1-201ENST00000312423 GPATCH8Q9UKJ3 1502 aaKnown RBP27.28■■□□□ 1.96
SWSAP1-201ENST00000312423 ITSN2Q9NZM3 1697 aa27.27■■□□□ 1.96
SWSAP1-201ENST00000312423 COL17A1Q9UMD9 1497 aaPredicted RBP27.26■■□□□ 1.95
SWSAP1-201ENST00000312423 ADGRL1O94910 1474 aa27.23■■□□□ 1.95
SWSAP1-201ENST00000312423 CFDP1Q9UEE9 299 aaPredicted RBP27.23■■□□□ 1.95
SWSAP1-201ENST00000312423 ZNF777Q9ULD5 760 aaPredicted RBP27.23■■□□□ 1.95
SWSAP1-201ENST00000312423 DENND4BO75064 1496 aaPredicted RBP27.17■■□□□ 1.94
SWSAP1-201ENST00000312423 SCAPERQ9BY12 1400 aa27.17■■□□□ 1.94
SWSAP1-201ENST00000312423 RAPGEF3O95398 923 aa27.17■■□□□ 1.94
SWSAP1-201ENST00000312423 PPARGC1BQ86YN6 1023 aaKnown RBP27.16■■□□□ 1.94
SWSAP1-201ENST00000312423 SAMD9LQ8IVG5 1584 aa27.16■■□□□ 1.94
SWSAP1-201ENST00000312423 ABCC1P33527 1531 aa27.14■■□□□ 1.93
SWSAP1-201ENST00000312423 RICTORQ6R327 1708 aa27.12■■□□□ 1.93
SWSAP1-201ENST00000312423 MYOM3Q5VTT5 1437 aa27.12■■□□□ 1.93
SWSAP1-201ENST00000312423 FRMPD1Q5SYB0 1578 aa27.12■■□□□ 1.93
SWSAP1-201ENST00000312423 POGZQ7Z3K3 1410 aa27.1■■□□□ 1.93
SWSAP1-201ENST00000312423 SYCP2Q9BX26 1530 aa27.09■■□□□ 1.93
SWSAP1-201ENST00000312423 PLEKHH2Q8IVE3 1493 aa27.08■■□□□ 1.93
SWSAP1-201ENST00000312423 ZNF644Q9H582 1327 aaPredicted RBP27.08■■□□□ 1.93
SWSAP1-201ENST00000312423 ARHGEF12Q9NZN5 1544 aa27.07■■□□□ 1.92
SWSAP1-201ENST00000312423 CAMSAP2Q08AD1 1489 aa27.06■■□□□ 1.92
SWSAP1-201ENST00000312423 ZNF518AQ6AHZ1 1483 aa27.06■■□□□ 1.92
SWSAP1-201ENST00000312423 HNRNPMP52272 730 aaKnown RBP eCLIP27.05■■□□□ 1.92
SWSAP1-201ENST00000312423 MIA2Q96PC5 1412 aa27.04■■□□□ 1.92
SWSAP1-201ENST00000312423 AFAP1Q8N556 730 aa27.03■■□□□ 1.92
SWSAP1-201ENST00000312423 KIAA1107Q9UPP5 1409 aa27.02■■□□□ 1.92
SWSAP1-201ENST00000312423 TRAPPC8Q9Y2L5 1435 aa27.02■■□□□ 1.92
SWSAP1-201ENST00000312423 ZMYM4Q5VZL5 1548 aa27.01■■□□□ 1.91
SWSAP1-201ENST00000312423 MYT1LQ9UL68 1186 aa27.01■■□□□ 1.91
SWSAP1-201ENST00000312423 FGD6Q6ZV73 1430 aa27■■□□□ 1.91
SWSAP1-201ENST00000312423 KDM5CP41229 1560 aa26.98■■□□□ 1.91
SWSAP1-201ENST00000312423 PTPN23Q9H3S7 1636 aa26.98■■□□□ 1.91
SWSAP1-201ENST00000312423 HECW2Q9P2P5 1572 aa26.95■■□□□ 1.91
SWSAP1-201ENST00000312423 ZFYVE16Q7Z3T8 1539 aa26.95■■□□□ 1.91
SWSAP1-201ENST00000312423 ARHGEF40Q8TER5 1519 aa26.94■■□□□ 1.9
SWSAP1-201ENST00000312423 MAGI2Q86UL8 1455 aa26.94■■□□□ 1.9
SWSAP1-201ENST00000312423 MBD5Q9P267 1494 aa26.94■■□□□ 1.9
SWSAP1-201ENST00000312423 YEATS2Q9ULM3 1422 aa26.92■■□□□ 1.9
SWSAP1-201ENST00000312423 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
SWSAP1-201ENST00000312423 SPAG9O60271 1321 aaKnown RBP26.9■■□□□ 1.9
SWSAP1-201ENST00000312423 ARHGEF5Q12774 1597 aa26.9■■□□□ 1.9
SWSAP1-201ENST00000312423 FAM50AQ14320 339 aaKnown RBP26.89■■□□□ 1.89
SWSAP1-201ENST00000312423 TCOF1Q13428 1488 aaKnown RBP26.89■■□□□ 1.89
SWSAP1-201ENST00000312423 MLH3Q9UHC1 1453 aa26.89■■□□□ 1.89
SWSAP1-201ENST00000312423 RSPH4AQ5TD94 716 aa26.87■■□□□ 1.89
SWSAP1-201ENST00000312423 KIDINS220Q9ULH0 1771 aa26.86■■□□□ 1.89
SWSAP1-201ENST00000312423 ATP7AQ04656 1500 aa26.86■■□□□ 1.89
SWSAP1-201ENST00000312423 INO80Q9ULG1 1556 aaPredicted RBP26.85■■□□□ 1.89
SWSAP1-201ENST00000312423 ABCA6Q8N139 1617 aa26.84■■□□□ 1.89
SWSAP1-201ENST00000312423 TSPY4P0CV99 314 aa26.82■■□□□ 1.88
SWSAP1-201ENST00000312423 TSPY10P0CW01 314 aa26.82■■□□□ 1.88
SWSAP1-201ENST00000312423 DIP2CQ9Y2E4 1556 aa26.82■■□□□ 1.88
SWSAP1-201ENST00000312423 ATP10AO60312 1499 aa26.81■■□□□ 1.88
SWSAP1-201ENST00000312423 DNMT1P26358 1616 aaKnown RBP26.8■■□□□ 1.88
SWSAP1-201ENST00000312423 ARID4BQ4LE39 1312 aaPredicted RBP26.79■■□□□ 1.88
SWSAP1-201ENST00000312423 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
SWSAP1-201ENST00000312423 C9orf84Q5VXU9 1444 aa26.79■■□□□ 1.88
SWSAP1-201ENST00000312423 DAPK1P53355 1430 aa26.77■■□□□ 1.88
SWSAP1-201ENST00000312423 RTEL1-TNFRSF6BF6WH68 1400 aa26.77■■□□□ 1.88
SWSAP1-201ENST00000312423 ABCC5O15440 1437 aa26.76■■□□□ 1.87
SWSAP1-201ENST00000312423 MAST1Q9Y2H9 1570 aa26.74■■□□□ 1.87
SWSAP1-201ENST00000312423 SIGLEC1Q9BZZ2 1709 aa26.72■■□□□ 1.87
SWSAP1-201ENST00000312423 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
SWSAP1-201ENST00000312423 SHANK2Q9UPX8 1470 aa26.72■■□□□ 1.87
SWSAP1-201ENST00000312423 RRBP1Q9P2E9 1410 aaKnown RBP26.72■■□□□ 1.87
SWSAP1-201ENST00000312423 REREQ9P2R6 1566 aa26.7■■□□□ 1.86
SWSAP1-201ENST00000312423 A2MP01023 1474 aa26.69■■□□□ 1.86
SWSAP1-201ENST00000312423 ITGAEP38570 1179 aa26.68■■□□□ 1.86
SWSAP1-201ENST00000312423 CHIC2Q9UKJ5 165 aa26.68■■□□□ 1.86
SWSAP1-201ENST00000312423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.67■■□□□ 1.86
SWSAP1-201ENST00000312423 PLXNC1O60486 1568 aa26.66■■□□□ 1.86
SWSAP1-201ENST00000312423 MLECQ14165 292 aa26.65■■□□□ 1.86
SWSAP1-201ENST00000312423 BCORL1Q5H9F3 1711 aa26.65■■□□□ 1.86
SWSAP1-201ENST00000312423 AGLP35573 1532 aa26.61■■□□□ 1.85
SWSAP1-201ENST00000312423 ANKRD30AQ9BXX3 1397 aa26.61■■□□□ 1.85
SWSAP1-201ENST00000312423 RRP7BPQ9NSQ0 103 aa26.6■■□□□ 1.85
SWSAP1-201ENST00000312423 DHX29Q7Z478 1369 aaKnown RBP26.6■■□□□ 1.85
SWSAP1-201ENST00000312423 KIF15Q9NS87 1388 aa26.6■■□□□ 1.85
SWSAP1-201ENST00000312423 PTPRKQ15262 1439 aa26.58■■□□□ 1.85
SWSAP1-201ENST00000312423 KDM4FA0A1W2PPD8 638 aa26.58■■□□□ 1.85
SWSAP1-201ENST00000312423 DUOX2Q9NRD8 1548 aa26.56■■□□□ 1.84
SWSAP1-201ENST00000312423 ADGRL2O95490 1459 aa26.56■■□□□ 1.84
SWSAP1-201ENST00000312423 NCOA1Q15788 1441 aa26.55■■□□□ 1.84
SWSAP1-201ENST00000312423 ADAMTSL3P82987 1691 aa26.55■■□□□ 1.84
SWSAP1-201ENST00000312423 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
SWSAP1-201ENST00000312423 KIF3BO15066 747 aa26.53■■□□□ 1.84
SWSAP1-201ENST00000312423 FER1L4A9Z1Z3 1794 aa26.52■■□□□ 1.84
SWSAP1-201ENST00000312423 GGT6Q6P531 493 aa26.5■■□□□ 1.83
SWSAP1-201ENST00000312423 EIF2AK4Q9P2K8 1649 aaKnown RBP26.49■■□□□ 1.83
SWSAP1-201ENST00000312423 RIMS1Q86UR5 1692 aaKnown RBP26.49■■□□□ 1.83
SWSAP1-201ENST00000312423 ROCK1Q13464 1354 aa26.49■■□□□ 1.83
SWSAP1-201ENST00000312423 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
SWSAP1-201ENST00000312423 ESF1Q9H501 851 aaKnown RBP26.47■■□□□ 1.83
SWSAP1-201ENST00000312423 AEBP2Q6ZN18 517 aaPredicted RBP26.42■■□□□ 1.82
SWSAP1-201ENST00000312423 ANKRD50Q9ULJ7 1429 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms