RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 MAP3K1Q13233 1512 aa31.1■■■□□ 2.57
VEGFB-201ENST00000309422 PREX2Q70Z35 1606 aa31.1■■■□□ 2.57
VEGFB-201ENST00000309422 RAPGEF3O95398 923 aa31.05■■■□□ 2.56
VEGFB-201ENST00000309422 SCAPERQ9BY12 1400 aa31.05■■■□□ 2.56
VEGFB-201ENST00000309422 SUPT6HQ7KZ85 1726 aaKnown RBP31.04■■■□□ 2.56
VEGFB-201ENST00000309422 LRRC9Q6ZRR7 1453 aa31.04■■■□□ 2.56
VEGFB-201ENST00000309422 CFDP1Q9UEE9 299 aaPredicted RBP31.02■■■□□ 2.56
VEGFB-201ENST00000309422 GPATCH8Q9UKJ3 1502 aaKnown RBP31■■■□□ 2.55
VEGFB-201ENST00000309422 ZNF777Q9ULD5 760 aaPredicted RBP31■■■□□ 2.55
VEGFB-201ENST00000309422 POGZQ7Z3K3 1410 aa31■■■□□ 2.55
VEGFB-201ENST00000309422 ITSN2Q9NZM3 1697 aa30.99■■■□□ 2.55
VEGFB-201ENST00000309422 NCOA2Q15596 1464 aa30.99■■■□□ 2.55
VEGFB-201ENST00000309422 CDC42BPAQ5VT25 1732 aa30.99■■■□□ 2.55
VEGFB-201ENST00000309422 CDC42BPBQ9Y5S2 1711 aa30.97■■■□□ 2.55
VEGFB-201ENST00000309422 ZNF518AQ6AHZ1 1483 aa30.96■■■□□ 2.55
VEGFB-201ENST00000309422 PLEKHH2Q8IVE3 1493 aa30.96■■■□□ 2.55
VEGFB-201ENST00000309422 FRMPD1Q5SYB0 1578 aa30.95■■■□□ 2.55
VEGFB-201ENST00000309422 MYT1LQ9UL68 1186 aa30.93■■■□□ 2.54
VEGFB-201ENST00000309422 ABCC1P33527 1531 aa30.93■■■□□ 2.54
VEGFB-201ENST00000309422 RICTORQ6R327 1708 aa30.92■■■□□ 2.54
VEGFB-201ENST00000309422 ZMYM4Q5VZL5 1548 aa30.92■■■□□ 2.54
VEGFB-201ENST00000309422 MAGI2Q86UL8 1455 aa30.91■■■□□ 2.54
VEGFB-201ENST00000309422 ZFYVE16Q7Z3T8 1539 aa30.88■■■□□ 2.53
VEGFB-201ENST00000309422 ARHGEF40Q8TER5 1519 aa30.88■■■□□ 2.53
VEGFB-201ENST00000309422 KANK4Q5T7N3 995 aaPredicted RBP30.87■■■□□ 2.53
VEGFB-201ENST00000309422 SAMD9LQ8IVG5 1584 aa30.85■■■□□ 2.53
VEGFB-201ENST00000309422 SYCP2Q9BX26 1530 aa30.83■■■□□ 2.53
VEGFB-201ENST00000309422 KIAA1107Q9UPP5 1409 aa30.83■■■□□ 2.53
VEGFB-201ENST00000309422 AEBP2Q6ZN18 517 aaPredicted RBP30.82■■■□□ 2.52
VEGFB-201ENST00000309422 ARID4BQ4LE39 1312 aaPredicted RBP30.8■■■□□ 2.52
VEGFB-201ENST00000309422 KDM5CP41229 1560 aa30.8■■■□□ 2.52
VEGFB-201ENST00000309422 AFAP1Q8N556 730 aa30.79■■■□□ 2.52
VEGFB-201ENST00000309422 HECW2Q9P2P5 1572 aa30.78■■■□□ 2.52
VEGFB-201ENST00000309422 MYOM3Q5VTT5 1437 aa30.76■■■□□ 2.52
VEGFB-201ENST00000309422 TRAPPC8Q9Y2L5 1435 aa30.76■■■□□ 2.52
VEGFB-201ENST00000309422 HNRNPMP52272 730 aaKnown RBP eCLIP30.75■■■□□ 2.51
VEGFB-201ENST00000309422 ARHGEF12Q9NZN5 1544 aa30.75■■■□□ 2.51
VEGFB-201ENST00000309422 CAMSAP2Q08AD1 1489 aa30.74■■■□□ 2.51
VEGFB-201ENST00000309422 MLH3Q9UHC1 1453 aa30.73■■■□□ 2.51
VEGFB-201ENST00000309422 MIA2Q96PC5 1412 aa30.73■■■□□ 2.51
VEGFB-201ENST00000309422 YEATS2Q9ULM3 1422 aa30.73■■■□□ 2.51
VEGFB-201ENST00000309422 SPAG9O60271 1321 aaKnown RBP30.73■■■□□ 2.51
VEGFB-201ENST00000309422 C9orf84Q5VXU9 1444 aa30.71■■■□□ 2.51
VEGFB-201ENST00000309422 ATP10AO60312 1499 aa30.69■■■□□ 2.5
VEGFB-201ENST00000309422 ZNF644Q9H582 1327 aaPredicted RBP30.69■■■□□ 2.5
VEGFB-201ENST00000309422 RSPH4AQ5TD94 716 aa30.68■■■□□ 2.5
VEGFB-201ENST00000309422 CCDC141Q6ZP82 1450 aa30.67■■■□□ 2.5
VEGFB-201ENST00000309422 KDM4FA0A1W2PPD8 638 aa30.62■■■□□ 2.49
VEGFB-201ENST00000309422 ATP7AQ04656 1500 aa30.62■■■□□ 2.49
VEGFB-201ENST00000309422 DIP2CQ9Y2E4 1556 aa30.6■■■□□ 2.49
VEGFB-201ENST00000309422 MBD5Q9P267 1494 aa30.6■■■□□ 2.49
VEGFB-201ENST00000309422 TSPY4P0CV99 314 aa30.6■■■□□ 2.49
VEGFB-201ENST00000309422 TSPY10P0CW01 314 aa30.6■■■□□ 2.49
VEGFB-201ENST00000309422 ABCA6Q8N139 1617 aa30.58■■■□□ 2.49
VEGFB-201ENST00000309422 ARHGEF5Q12774 1597 aa30.57■■■□□ 2.48
VEGFB-201ENST00000309422 FGD6Q6ZV73 1430 aa30.57■■■□□ 2.48
VEGFB-201ENST00000309422 REREQ9P2R6 1566 aa30.56■■■□□ 2.48
VEGFB-201ENST00000309422 INO80Q9ULG1 1556 aaPredicted RBP30.56■■■□□ 2.48
VEGFB-201ENST00000309422 RTEL1-TNFRSF6BF6WH68 1400 aa30.54■■■□□ 2.48
VEGFB-201ENST00000309422 KIDINS220Q9ULH0 1771 aa30.54■■■□□ 2.48
VEGFB-201ENST00000309422 PTPN23Q9H3S7 1636 aa30.54■■■□□ 2.48
VEGFB-201ENST00000309422 BCORL1Q5H9F3 1711 aa30.52■■■□□ 2.48
VEGFB-201ENST00000309422 MLECQ14165 292 aa30.51■■■□□ 2.47
VEGFB-201ENST00000309422 ESF1Q9H501 851 aaKnown RBP30.47■■■□□ 2.47
VEGFB-201ENST00000309422 A2MP01023 1474 aa30.47■■■□□ 2.47
VEGFB-201ENST00000309422 TCOF1Q13428 1488 aaKnown RBP30.46■■■□□ 2.47
VEGFB-201ENST00000309422 AGLP35573 1532 aa30.45■■■□□ 2.47
VEGFB-201ENST00000309422 FAM50AQ14320 339 aaKnown RBP30.45■■■□□ 2.47
VEGFB-201ENST00000309422 ADAMTSL3P82987 1691 aa30.44■■■□□ 2.46
VEGFB-201ENST00000309422 ADGBQ8N7X0 1667 aa30.44■■■□□ 2.46
VEGFB-201ENST00000309422 PPARGC1BQ86YN6 1023 aaKnown RBP30.42■■■□□ 2.46
VEGFB-201ENST00000309422 MADDQ8WXG6 1647 aa30.42■■■□□ 2.46
VEGFB-201ENST00000309422 SHANK2Q9UPX8 1470 aa30.4■■■□□ 2.46
VEGFB-201ENST00000309422 MAST1Q9Y2H9 1570 aa30.39■■■□□ 2.46
VEGFB-201ENST00000309422 SIGLEC1Q9BZZ2 1709 aa30.38■■■□□ 2.45
VEGFB-201ENST00000309422 DAPK1P53355 1430 aa30.37■■■□□ 2.45
VEGFB-201ENST00000309422 PLXNC1O60486 1568 aa30.36■■■□□ 2.45
VEGFB-201ENST00000309422 PTPRMP28827 1452 aa30.35■■■□□ 2.45
VEGFB-201ENST00000309422 DNMT1P26358 1616 aaKnown RBP30.35■■■□□ 2.45
VEGFB-201ENST00000309422 DHX29Q7Z478 1369 aaKnown RBP30.34■■■□□ 2.45
VEGFB-201ENST00000309422 ABCC5O15440 1437 aa30.34■■■□□ 2.45
VEGFB-201ENST00000309422 FER1L4A9Z1Z3 1794 aa30.34■■■□□ 2.45
VEGFB-201ENST00000309422 RIMS1Q86UR5 1692 aaKnown RBP30.34■■■□□ 2.45
VEGFB-201ENST00000309422 CROCC2H7BZ55 1655 aa30.32■■■□□ 2.44
VEGFB-201ENST00000309422 CNTLNQ9NXG0 1405 aa30.29■■■□□ 2.44
VEGFB-201ENST00000309422 ANKRD30AQ9BXX3 1397 aa30.28■■■□□ 2.44
VEGFB-201ENST00000309422 PLPPR3Q6T4P5 718 aa30.28■■■□□ 2.44
VEGFB-201ENST00000309422 GGT6Q6P531 493 aa30.27■■■□□ 2.44
VEGFB-201ENST00000309422 KIF15Q9NS87 1388 aa30.26■■■□□ 2.43
VEGFB-201ENST00000309422 KIF3BO15066 747 aa30.25■■■□□ 2.43
VEGFB-201ENST00000309422 DUOX2Q9NRD8 1548 aa30.24■■■□□ 2.43
VEGFB-201ENST00000309422 PPP6R1Q9UPN7 881 aa30.23■■■□□ 2.43
VEGFB-201ENST00000309422 CHIC2Q9UKJ5 165 aa30.22■■■□□ 2.43
VEGFB-201ENST00000309422 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.21■■■□□ 2.433e-10■□□□□ 10
VEGFB-201ENST00000309422 RRP7BPQ9NSQ0 103 aa30.2■■■□□ 2.43
VEGFB-201ENST00000309422 ERBINQ96RT1 1412 aa30.18■■■□□ 2.42
VEGFB-201ENST00000309422 EIF2AK4Q9P2K8 1649 aaKnown RBP30.17■■■□□ 2.42
VEGFB-201ENST00000309422 FAM135AQ9P2D6 1515 aa30.16■■■□□ 2.42
VEGFB-201ENST00000309422 RRBP1Q9P2E9 1410 aaKnown RBP30.15■■■□□ 2.42
VEGFB-201ENST00000309422 ADGRL2O95490 1459 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms