RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 SPRYD3Q8NCJ5 442 aa23.88■■□□□ 1.41
UBXN2A-201ENST00000309033 TIMELESSQ9UNS1 1208 aa23.87■■□□□ 1.41
UBXN2A-201ENST00000309033 CHMP4BQ9H444 224 aaKnown RBP23.86■■□□□ 1.41
UBXN2A-201ENST00000309033 RAB3GAP2Q9H2M9 1393 aa23.85■■□□□ 1.41
UBXN2A-201ENST00000309033 NAP1L2Q9ULW6 460 aaPredicted RBP23.84■■□□□ 1.41
UBXN2A-201ENST00000309033 KCNJ4P48050 445 aa23.84■■□□□ 1.41
UBXN2A-201ENST00000309033 NPHP1O15259 732 aa23.83■■□□□ 1.41
UBXN2A-201ENST00000309033 FGD1P98174 961 aa23.83■■□□□ 1.41
UBXN2A-201ENST00000309033 KTN1Q86UP2 1357 aaKnown RBP23.82■■□□□ 1.4
UBXN2A-201ENST00000309033 MPHOSPH9Q99550 1183 aa23.82■■□□□ 1.4
UBXN2A-201ENST00000309033 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
UBXN2A-201ENST00000309033 NAP1L5Q96NT1 182 aaPredicted RBP23.79■■□□□ 1.4
UBXN2A-201ENST00000309033 TDRD9Q8NDG6 1382 aaKnown RBP23.78■■□□□ 1.4
UBXN2A-201ENST00000309033 HSCBQ8IWL3 235 aa23.78■■□□□ 1.4
UBXN2A-201ENST00000309033 APBB1O00213 710 aa23.77■■□□□ 1.4
UBXN2A-201ENST00000309033 TRHP20396 242 aaPredicted RBP23.77■■□□□ 1.4
UBXN2A-201ENST00000309033 NUP155O75694 1391 aa23.76■■□□□ 1.39
UBXN2A-201ENST00000309033 ERICH6BQ5W0A0 696 aa23.75■■□□□ 1.39
UBXN2A-201ENST00000309033 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
UBXN2A-201ENST00000309033 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
UBXN2A-201ENST00000309033 RTF1Q92541 710 aaKnown RBP23.71■■□□□ 1.39
UBXN2A-201ENST00000309033 HDGFL2Q7Z4V5 671 aaPredicted RBP23.71■■□□□ 1.39
UBXN2A-201ENST00000309033 U2AF1L5P0DN76 240 aaPredicted RBP23.71■■□□□ 1.39
UBXN2A-201ENST00000309033 U2AF1Q01081 240 aaKnown RBP eCLIP23.71■■□□□ 1.39
UBXN2A-201ENST00000309033 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.38
UBXN2A-201ENST00000309033 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
UBXN2A-201ENST00000309033 GOLGA2Q08379 1002 aa23.69■■□□□ 1.38
UBXN2A-201ENST00000309033 PAK3O75914 559 aaPredicted RBP23.66■■□□□ 1.38
UBXN2A-201ENST00000309033 FMN1Q68DA7 1419 aa23.66■■□□□ 1.38
UBXN2A-201ENST00000309033 HNRNPMP52272 730 aaKnown RBP eCLIP23.66■■□□□ 1.38
UBXN2A-201ENST00000309033 ITPRIPQ8IWB1 547 aa23.65■■□□□ 1.38
UBXN2A-201ENST00000309033 WIZO95785 1651 aa23.65■■□□□ 1.38
UBXN2A-201ENST00000309033 NUTM2DQ5VT03 806 aaPredicted RBP23.65■■□□□ 1.38
UBXN2A-201ENST00000309033 ANKRD30AQ9BXX3 1397 aa23.64■■□□□ 1.38
UBXN2A-201ENST00000309033 RALBP1Q15311 655 aa23.64■■□□□ 1.37
UBXN2A-201ENST00000309033 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
UBXN2A-201ENST00000309033 GOLGA6L4A6NEF3 574 aa23.63■■□□□ 1.37
UBXN2A-201ENST00000309033 L3MBTL2Q969R5 705 aa23.63■■□□□ 1.37
UBXN2A-201ENST00000309033 MCCP23508 829 aa23.62■■□□□ 1.37
UBXN2A-201ENST00000309033 SMARCA2P51531 1590 aa23.62■■□□□ 1.37
UBXN2A-201ENST00000309033 CCDC146Q8IYE0 955 aa23.61■■□□□ 1.37
UBXN2A-201ENST00000309033 DEKP35659 375 aaKnown RBP23.6■■□□□ 1.37
UBXN2A-201ENST00000309033 IPO8O15397 1037 aaKnown RBP23.6■■□□□ 1.37
UBXN2A-201ENST00000309033 EFCAB2Q5VUJ9 269 aa23.59■■□□□ 1.37
UBXN2A-201ENST00000309033 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
UBXN2A-201ENST00000309033 KIF3BO15066 747 aa23.58■■□□□ 1.37
UBXN2A-201ENST00000309033 GOLGA6L6A8MZA4 724 aa23.57■■□□□ 1.36
UBXN2A-201ENST00000309033 SLKQ9H2G2 1235 aaPredicted RBP23.54■■□□□ 1.36
UBXN2A-201ENST00000309033 RWDD1Q9H446 243 aaPredicted RBP23.54■■□□□ 1.36
UBXN2A-201ENST00000309033 ZNF330Q9Y3S2 320 aaPredicted RBP23.54■■□□□ 1.36
UBXN2A-201ENST00000309033 TOP2AP11388 1531 aaKnown RBP23.53■■□□□ 1.36
UBXN2A-201ENST00000309033 RAPGEF2Q9Y4G8 1499 aa23.52■■□□□ 1.35
UBXN2A-201ENST00000309033 EIF3AQ14152 1382 aaKnown RBP23.51■■□□□ 1.35
UBXN2A-201ENST00000309033 CSB-PGBD3P0DP91 1061 aa23.5■■□□□ 1.35
UBXN2A-201ENST00000309033 CLUAP1Q96AJ1 413 aa23.5■■□□□ 1.35
UBXN2A-201ENST00000309033 GZF1Q9H116 711 aaPredicted RBP23.5■■□□□ 1.35
UBXN2A-201ENST00000309033 SMC4Q9NTJ3 1288 aa23.49■■□□□ 1.35
UBXN2A-201ENST00000309033 CALD1Q05682 793 aaKnown RBP23.48■■□□□ 1.35
UBXN2A-201ENST00000309033 L1TD1Q5T7N2 865 aaKnown RBP23.48■■□□□ 1.35
UBXN2A-201ENST00000309033 KIAA1211Q6ZU35 1233 aa23.48■■□□□ 1.35
UBXN2A-201ENST00000309033 DRC7Q8IY82 874 aa23.48■■□□□ 1.35
UBXN2A-201ENST00000309033 MFAP1P55081 439 aaKnown RBP23.48■■□□□ 1.35
UBXN2A-201ENST00000309033 MSNP26038 577 aaKnown RBP23.46■■□□□ 1.35
UBXN2A-201ENST00000309033 TCERG1O14776 1098 aaKnown RBP23.46■■□□□ 1.35
UBXN2A-201ENST00000309033 ISY1Q9ULR0 285 aaKnown RBP23.45■■□□□ 1.34
UBXN2A-201ENST00000309033 CFAP44Q96MT7 982 aa23.44■■□□□ 1.34
UBXN2A-201ENST00000309033 NRDCO43847 1150 aa23.43■■□□□ 1.34
UBXN2A-201ENST00000309033 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.43■■□□□ 1.34
UBXN2A-201ENST00000309033 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
UBXN2A-201ENST00000309033 GNL2Q13823 731 aaKnown RBP23.43■■□□□ 1.34
UBXN2A-201ENST00000309033 TSHZ2Q9NRE2 1034 aa23.43■■□□□ 1.34
UBXN2A-201ENST00000309033 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
UBXN2A-201ENST00000309033 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
UBXN2A-201ENST00000309033 WASHC2CQ9Y4E1 1318 aa23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 TRAK1Q9UPV9 953 aa23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 TERF2IPQ9NYB0 399 aa23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 NLRP13Q86W25 1043 aa23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 RRP7AQ9Y3A4 280 aaKnown RBP23.41■■□□□ 1.34
UBXN2A-201ENST00000309033 SLC4A10Q6U841 1118 aa23.4■■□□□ 1.34
UBXN2A-201ENST00000309033 STK31Q9BXU1 1019 aa23.4■■□□□ 1.34
UBXN2A-201ENST00000309033 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
UBXN2A-201ENST00000309033 CENPJQ9HC77 1338 aaPredicted RBP23.38■■□□□ 1.33
UBXN2A-201ENST00000309033 CHAF1AQ13111 956 aaPredicted RBP23.38■■□□□ 1.33
UBXN2A-201ENST00000309033 GBP4Q96PP9 640 aa23.38■■□□□ 1.33
UBXN2A-201ENST00000309033 ST20-MTHFSA0A0A6YYL1 179 aa23.38■■□□□ 1.33
UBXN2A-201ENST00000309033 FOXD4L1Q9NU39 408 aa23.37■■□□□ 1.33
UBXN2A-201ENST00000309033 CHMP3Q9Y3E7 222 aa23.37■■□□□ 1.33
UBXN2A-201ENST00000309033 TRIM6-TRIM34B2RNG4 842 aa23.37■■□□□ 1.33
UBXN2A-201ENST00000309033 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
UBXN2A-201ENST00000309033 DHX57Q6P158 1386 aaKnown RBP23.36■■□□□ 1.33
UBXN2A-201ENST00000309033 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
UBXN2A-201ENST00000309033 PANK3Q9H999 370 aa23.35■■□□□ 1.33
UBXN2A-201ENST00000309033 NOL8Q76FK4 1167 aaKnown RBP23.34■■□□□ 1.33
UBXN2A-201ENST00000309033 CLSTN1O94985 981 aa23.34■■□□□ 1.33
UBXN2A-201ENST00000309033 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
UBXN2A-201ENST00000309033 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
UBXN2A-201ENST00000309033 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
UBXN2A-201ENST00000309033 IPO9Q96P70 1041 aaKnown RBP23.31■■□□□ 1.32
UBXN2A-201ENST00000309033 MYBBP1AQ9BQG0 1328 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms