RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 HRCP23327 699 aa15.94■□□□□ 0.14
CASP3-201ENST00000308394 TCOF1Q13428 1488 aaKnown RBP15.94■□□□□ 0.14
CASP3-201ENST00000308394 RIMBP3CA6NJZ7 1639 aa15.92■□□□□ 0.14
CASP3-201ENST00000308394 RIMBP3BA6NNM3 1639 aa15.92■□□□□ 0.14
CASP3-201ENST00000308394 RIMBP3Q9UFD9 1639 aa15.92■□□□□ 0.14
CASP3-201ENST00000308394 ITSN2Q9NZM3 1697 aa15.92■□□□□ 0.14
CASP3-201ENST00000308394 ARXQ96QS3 562 aa15.91■□□□□ 0.14
CASP3-201ENST00000308394 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
CASP3-201ENST00000308394 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.89■□□□□ 0.13
CASP3-201ENST00000308394 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
CASP3-201ENST00000308394 PTPRKQ15262 1439 aa15.89■□□□□ 0.13
CASP3-201ENST00000308394 ASXL2Q76L83 1435 aa15.89■□□□□ 0.13
CASP3-201ENST00000308394 CDC42BPAQ5VT25 1732 aa15.89■□□□□ 0.13
CASP3-201ENST00000308394 CAMSAP2Q08AD1 1489 aa15.87■□□□□ 0.13
CASP3-201ENST00000308394 TTC37Q6PGP7 1564 aa15.87■□□□□ 0.13
CASP3-201ENST00000308394 TIMELESSQ9UNS1 1208 aa15.87■□□□□ 0.13
CASP3-201ENST00000308394 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
CASP3-201ENST00000308394 RAB3GAP2Q9H2M9 1393 aa15.85■□□□□ 0.13
CASP3-201ENST00000308394 DAPK1P53355 1430 aa15.84■□□□□ 0.13
CASP3-201ENST00000308394 ARHGAP5Q13017 1502 aa15.84■□□□□ 0.13
CASP3-201ENST00000308394 RRP7BPQ9NSQ0 103 aa15.83■□□□□ 0.13
CASP3-201ENST00000308394 PREX2Q70Z35 1606 aa15.83■□□□□ 0.12
CASP3-201ENST00000308394 ABCC5O15440 1437 aa15.83■□□□□ 0.12
CASP3-201ENST00000308394 ZEB1P37275 1124 aaPredicted RBP15.82■□□□□ 0.12
CASP3-201ENST00000308394 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
CASP3-201ENST00000308394 CDC42BPBQ9Y5S2 1711 aa15.82■□□□□ 0.12
CASP3-201ENST00000308394 PLCH2O75038 1416 aa15.81■□□□□ 0.12
CASP3-201ENST00000308394 MYO5CQ9NQX4 1742 aa15.81■□□□□ 0.12
CASP3-201ENST00000308394 KLHL34Q8N239 644 aa15.81■□□□□ 0.12
CASP3-201ENST00000308394 DNMT1P26358 1616 aaKnown RBP15.8■□□□□ 0.12
CASP3-201ENST00000308394 EFCAB2Q5VUJ9 269 aa15.8■□□□□ 0.12
CASP3-201ENST00000308394 HFM1A2PYH4 1435 aa15.8■□□□□ 0.12
CASP3-201ENST00000308394 SAMD9LQ8IVG5 1584 aa15.78■□□□□ 0.12
CASP3-201ENST00000308394 TSPY4P0CV99 314 aa15.78■□□□□ 0.12
CASP3-201ENST00000308394 TSPY10P0CW01 314 aa15.78■□□□□ 0.12
CASP3-201ENST00000308394 NAIPQ13075 1403 aa15.77■□□□□ 0.12
CASP3-201ENST00000308394 DHX57Q6P158 1386 aaKnown RBP15.76■□□□□ 0.11
CASP3-201ENST00000308394 AKNAQ7Z591 1439 aa15.75■□□□□ 0.11
CASP3-201ENST00000308394 ABCA9Q8IUA7 1624 aa15.75■□□□□ 0.11
CASP3-201ENST00000308394 RSPH4AQ5TD94 716 aa15.75■□□□□ 0.11
CASP3-201ENST00000308394 ROCK1Q13464 1354 aa15.74■□□□□ 0.11
CASP3-201ENST00000308394 MBD5Q9P267 1494 aa15.74■□□□□ 0.11
CASP3-201ENST00000308394 SYCP2Q9BX26 1530 aa15.73■□□□□ 0.11
CASP3-201ENST00000308394 PLEKHH2Q8IVE3 1493 aa15.73■□□□□ 0.11
CASP3-201ENST00000308394 MAPKBP1O60336 1514 aa15.72■□□□□ 0.11
CASP3-201ENST00000308394 C9orf84Q5VXU9 1444 aa15.72■□□□□ 0.11
CASP3-201ENST00000308394 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 ANKRD30AQ9BXX3 1397 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 ARHGEF5Q12774 1597 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 KIAA1107Q9UPP5 1409 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 FANCAO15360 1455 aa15.71■□□□□ 0.11
CASP3-201ENST00000308394 NCOA1Q15788 1441 aa15.71■□□□□ 0.1
CASP3-201ENST00000308394 ARAP3Q8WWN8 1544 aa15.7■□□□□ 0.1
CASP3-201ENST00000308394 CROCC2H7BZ55 1655 aa15.7■□□□□ 0.1
CASP3-201ENST00000308394 TRIM52Q96A61 297 aa15.69■□□□□ 0.1
CASP3-201ENST00000308394 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
CASP3-201ENST00000308394 SHANK2Q9UPX8 1470 aa15.69■□□□□ 0.1
CASP3-201ENST00000308394 ARHGEF12Q9NZN5 1544 aa15.68■□□□□ 0.1
CASP3-201ENST00000308394 ADGRL2O95490 1459 aa15.67■□□□□ 0.1
CASP3-201ENST00000308394 ADGBQ8N7X0 1667 aa15.67■□□□□ 0.1
CASP3-201ENST00000308394 ABCC1P33527 1531 aa15.67■□□□□ 0.1
CASP3-201ENST00000308394 FAM69CQ0P6D2 419 aa15.66■□□□□ 0.1
CASP3-201ENST00000308394 KDM6BO15054 1643 aa15.66■□□□□ 0.1
CASP3-201ENST00000308394 CLSPNQ9HAW4 1339 aa15.66■□□□□ 0.1
CASP3-201ENST00000308394 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
CASP3-201ENST00000308394 TRAPPC8Q9Y2L5 1435 aa15.65■□□□□ 0.1
CASP3-201ENST00000308394 ADGRL1O94910 1474 aa15.64■□□□□ 0.09
CASP3-201ENST00000308394 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
CASP3-201ENST00000308394 KIF15Q9NS87 1388 aa15.63■□□□□ 0.09
CASP3-201ENST00000308394 MYT1LQ9UL68 1186 aa15.63■□□□□ 0.09
CASP3-201ENST00000308394 ANKRD50Q9ULJ7 1429 aa15.62■□□□□ 0.09
CASP3-201ENST00000308394 SPAG9O60271 1321 aaKnown RBP15.62■□□□□ 0.09
CASP3-201ENST00000308394 ACIN1Q9UKV3 1341 aaKnown RBP15.6■□□□□ 0.09
CASP3-201ENST00000308394 MAST1Q9Y2H9 1570 aa15.59■□□□□ 0.09
CASP3-201ENST00000308394 GLI2P10070 1586 aa15.59■□□□□ 0.09
CASP3-201ENST00000308394 DIP2BQ9P265 1576 aa15.58■□□□□ 0.09
CASP3-201ENST00000308394 CFAP74Q9C0B2 1584 aa15.58■□□□□ 0.08
CASP3-201ENST00000308394 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
CASP3-201ENST00000308394 MAP3K4Q9Y6R4 1608 aa15.58■□□□□ 0.08
CASP3-201ENST00000308394 TULP1O00294 542 aaPredicted RBP15.56■□□□□ 0.08
CASP3-201ENST00000308394 NEUROD1Q13562 356 aa15.56■□□□□ 0.08
CASP3-201ENST00000308394 SLC4A1APQ9BWU0 796 aaKnown RBP15.56■□□□□ 0.08
CASP3-201ENST00000308394 NEO1Q92859 1461 aa15.55■□□□□ 0.08
CASP3-201ENST00000308394 SIN3AQ96ST3 1273 aa15.55■□□□□ 0.08
CASP3-201ENST00000308394 RTEL1-TNFRSF6BF6WH68 1400 aa15.54■□□□□ 0.08
CASP3-201ENST00000308394 ZNF518AQ6AHZ1 1483 aa15.54■□□□□ 0.08
CASP3-201ENST00000308394 PLXNC1O60486 1568 aa15.53■□□□□ 0.08
CASP3-201ENST00000308394 PODXL2Q9NZ53 605 aa15.53■□□□□ 0.08
CASP3-201ENST00000308394 RAPGEF3O95398 923 aa15.53■□□□□ 0.08
CASP3-201ENST00000308394 NUP155O75694 1391 aa15.53■□□□□ 0.08
CASP3-201ENST00000308394 DNAJC5Q9H3Z4 198 aa15.52■□□□□ 0.08
CASP3-201ENST00000308394 FOXD1Q16676 465 aa15.52■□□□□ 0.07
CASP3-201ENST00000308394 ZFYVE16Q7Z3T8 1539 aa15.52■□□□□ 0.07
CASP3-201ENST00000308394 POGZQ7Z3K3 1410 aa15.51■□□□□ 0.07
CASP3-201ENST00000308394 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
CASP3-201ENST00000308394 ATP7AQ04656 1500 aa15.51■□□□□ 0.07
CASP3-201ENST00000308394 TSPOAP1O95153 1857 aa15.51■□□□□ 0.07
CASP3-201ENST00000308394 AMER1Q5JTC6 1135 aaPredicted RBP15.51■□□□□ 0.07
CASP3-201ENST00000308394 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 147 ms