RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 PREX2Q70Z35 1606 aa26.14■■□□□ 1.78
KRT28-201ENST00000306658 PTPRKQ15262 1439 aa26.14■■□□□ 1.78
KRT28-201ENST00000306658 SETD5Q9C0A6 1442 aa26.13■■□□□ 1.77
KRT28-201ENST00000306658 MYO5CQ9NQX4 1742 aa26.11■■□□□ 1.77
KRT28-201ENST00000306658 CDC42BPBQ9Y5S2 1711 aa26.11■■□□□ 1.77
KRT28-201ENST00000306658 ZEB1P37275 1124 aaPredicted RBP26.1■■□□□ 1.77
KRT28-201ENST00000306658 DNMT1P26358 1616 aaKnown RBP26.1■■□□□ 1.77
KRT28-201ENST00000306658 DAPK1P53355 1430 aa26.09■■□□□ 1.77
KRT28-201ENST00000306658 RAB3GAP2Q9H2M9 1393 aa26.07■■□□□ 1.76
KRT28-201ENST00000306658 ABCC5O15440 1437 aa26.07■■□□□ 1.76
KRT28-201ENST00000306658 PLCH2O75038 1416 aa26.07■■□□□ 1.76
KRT28-201ENST00000306658 ARHGAP5Q13017 1502 aa26.07■■□□□ 1.76
KRT28-201ENST00000306658 HFM1A2PYH4 1435 aa26.06■■□□□ 1.76
KRT28-201ENST00000306658 CHIC2Q9UKJ5 165 aa26.05■■□□□ 1.76
KRT28-201ENST00000306658 AKNAQ7Z591 1439 aa26.02■■□□□ 1.76
KRT28-201ENST00000306658 ABCA9Q8IUA7 1624 aa26.02■■□□□ 1.76
KRT28-201ENST00000306658 EFCAB2Q5VUJ9 269 aa26.02■■□□□ 1.76
KRT28-201ENST00000306658 ROCK1Q13464 1354 aa26.01■■□□□ 1.75
KRT28-201ENST00000306658 ARAP3Q8WWN8 1544 aa26.01■■□□□ 1.75
KRT28-201ENST00000306658 SAMD9LQ8IVG5 1584 aa26■■□□□ 1.75
KRT28-201ENST00000306658 RSPH4AQ5TD94 716 aa26■■□□□ 1.75
KRT28-201ENST00000306658 PLEKHH2Q8IVE3 1493 aa26■■□□□ 1.75
KRT28-201ENST00000306658 NAIPQ13075 1403 aa26■■□□□ 1.75
KRT28-201ENST00000306658 MAPKBP1O60336 1514 aa25.98■■□□□ 1.75
KRT28-201ENST00000306658 ARHGEF5Q12774 1597 aa25.97■■□□□ 1.75
KRT28-201ENST00000306658 RRP7BPQ9NSQ0 103 aa25.97■■□□□ 1.75
KRT28-201ENST00000306658 HNRNPMP52272 730 aaKnown RBP eCLIP25.96■■□□□ 1.75
KRT28-201ENST00000306658 KIAA1107Q9UPP5 1409 aa25.96■■□□□ 1.75
KRT28-201ENST00000306658 CROCC2H7BZ55 1655 aa25.95■■□□□ 1.75
KRT28-201ENST00000306658 MBD5Q9P267 1494 aa25.95■■□□□ 1.74
KRT28-201ENST00000306658 TSPY4P0CV99 314 aa25.95■■□□□ 1.74
KRT28-201ENST00000306658 TSPY10P0CW01 314 aa25.95■■□□□ 1.74
KRT28-201ENST00000306658 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
KRT28-201ENST00000306658 SHANK2Q9UPX8 1470 aa25.93■■□□□ 1.74
KRT28-201ENST00000306658 GCC2Q8IWJ2 1684 aa25.92■■□□□ 1.74
KRT28-201ENST00000306658 CCDC141Q6ZP82 1450 aa25.91■■□□□ 1.74
KRT28-201ENST00000306658 SYCP2Q9BX26 1530 aa25.9■■□□□ 1.74
KRT28-201ENST00000306658 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
KRT28-201ENST00000306658 ADGRL2O95490 1459 aa25.9■■□□□ 1.74
KRT28-201ENST00000306658 ANKRD30AQ9BXX3 1397 aa25.9■■□□□ 1.74
KRT28-201ENST00000306658 CLSPNQ9HAW4 1339 aa25.89■■□□□ 1.74
KRT28-201ENST00000306658 NCOA1Q15788 1441 aa25.89■■□□□ 1.73
KRT28-201ENST00000306658 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
KRT28-201ENST00000306658 FANCAO15360 1455 aa25.88■■□□□ 1.73
KRT28-201ENST00000306658 ACIN1Q9UKV3 1341 aaKnown RBP25.88■■□□□ 1.73
KRT28-201ENST00000306658 CD109Q6YHK3 1445 aa25.87■■□□□ 1.73
KRT28-201ENST00000306658 ABCC1P33527 1531 aa25.85■■□□□ 1.73
KRT28-201ENST00000306658 ARHGEF12Q9NZN5 1544 aa25.82■■□□□ 1.72
KRT28-201ENST00000306658 MAST1Q9Y2H9 1570 aa25.79■■□□□ 1.72
KRT28-201ENST00000306658 GLI2P10070 1586 aa25.79■■□□□ 1.72
KRT28-201ENST00000306658 CFAP74Q9C0B2 1584 aa25.78■■□□□ 1.72
KRT28-201ENST00000306658 ADGRL1O94910 1474 aa25.77■■□□□ 1.72
KRT28-201ENST00000306658 KDM6BO15054 1643 aa25.75■■□□□ 1.71
KRT28-201ENST00000306658 TRAPPC8Q9Y2L5 1435 aa25.75■■□□□ 1.71
KRT28-201ENST00000306658 SCAPERQ9BY12 1400 aa25.74■■□□□ 1.71
KRT28-201ENST00000306658 TRIM52Q96A61 297 aa25.74■■□□□ 1.71
KRT28-201ENST00000306658 KIF15Q9NS87 1388 aa25.73■■□□□ 1.71
KRT28-201ENST00000306658 ANKRD50Q9ULJ7 1429 aa25.73■■□□□ 1.71
KRT28-201ENST00000306658 MAP3K4Q9Y6R4 1608 aa25.73■■□□□ 1.71
KRT28-201ENST00000306658 FAM69CQ0P6D2 419 aa25.72■■□□□ 1.71
KRT28-201ENST00000306658 DIP2BQ9P265 1576 aa25.71■■□□□ 1.71
KRT28-201ENST00000306658 AFAP1Q8N556 730 aa25.7■■□□□ 1.7
KRT28-201ENST00000306658 SPAG9O60271 1321 aaKnown RBP25.7■■□□□ 1.7
KRT28-201ENST00000306658 NEO1Q92859 1461 aa25.69■■□□□ 1.7
KRT28-201ENST00000306658 PLXNC1O60486 1568 aa25.68■■□□□ 1.7
KRT28-201ENST00000306658 RTEL1-TNFRSF6BF6WH68 1400 aa25.68■■□□□ 1.7
KRT28-201ENST00000306658 ZNF518AQ6AHZ1 1483 aa25.63■■□□□ 1.69
KRT28-201ENST00000306658 MPHOSPH9Q99550 1183 aa25.61■■□□□ 1.69
KRT28-201ENST00000306658 DUOX2Q9NRD8 1548 aa25.61■■□□□ 1.69
KRT28-201ENST00000306658 ZFYVE16Q7Z3T8 1539 aa25.6■■□□□ 1.69
KRT28-201ENST00000306658 ATP7AQ04656 1500 aa25.58■■□□□ 1.69
KRT28-201ENST00000306658 POGZQ7Z3K3 1410 aa25.58■■□□□ 1.69
KRT28-201ENST00000306658 MYT1LQ9UL68 1186 aa25.58■■□□□ 1.68
KRT28-201ENST00000306658 INO80Q9ULG1 1556 aaPredicted RBP25.57■■□□□ 1.68
KRT28-201ENST00000306658 ERBINQ96RT1 1412 aa25.56■■□□□ 1.68
KRT28-201ENST00000306658 DENND4BO75064 1496 aaPredicted RBP25.56■■□□□ 1.68
KRT28-201ENST00000306658 TEX14Q8IWB6 1497 aa25.56■■□□□ 1.68
KRT28-201ENST00000306658 SLC4A1APQ9BWU0 796 aaKnown RBP25.55■■□□□ 1.68
KRT28-201ENST00000306658 DNAJC5Q9H3Z4 198 aa25.55■■□□□ 1.68
KRT28-201ENST00000306658 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
KRT28-201ENST00000306658 KDM5CP41229 1560 aa25.53■■□□□ 1.68
KRT28-201ENST00000306658 NUP155O75694 1391 aa25.52■■□□□ 1.68
KRT28-201ENST00000306658 TSPOAP1O95153 1857 aa25.52■■□□□ 1.68
KRT28-201ENST00000306658 PZPP20742 1482 aa25.5■■□□□ 1.67
KRT28-201ENST00000306658 MLH3Q9UHC1 1453 aa25.5■■□□□ 1.67
KRT28-201ENST00000306658 KDM5DQ9BY66 1539 aa25.49■■□□□ 1.67
KRT28-201ENST00000306658 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
KRT28-201ENST00000306658 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
KRT28-201ENST00000306658 KIDINS220Q9ULH0 1771 aa25.48■■□□□ 1.67
KRT28-201ENST00000306658 NEUROD1Q13562 356 aa25.48■■□□□ 1.67
KRT28-201ENST00000306658 TIMELESSQ9UNS1 1208 aa25.48■■□□□ 1.67
KRT28-201ENST00000306658 RAPGEF3O95398 923 aa25.47■■□□□ 1.67
KRT28-201ENST00000306658 HECW2Q9P2P5 1572 aa25.46■■□□□ 1.67
KRT28-201ENST00000306658 DHX29Q7Z478 1369 aaKnown RBP25.45■■□□□ 1.67
KRT28-201ENST00000306658 UNC13BO14795 1591 aa25.45■■□□□ 1.66
KRT28-201ENST00000306658 RICTORQ6R327 1708 aa25.44■■□□□ 1.66
KRT28-201ENST00000306658 PKD2Q13563 968 aa25.42■■□□□ 1.66
KRT28-201ENST00000306658 FOXD1Q16676 465 aa25.41■■□□□ 1.66
KRT28-201ENST00000306658 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.41■■□□□ 1.66
KRT28-201ENST00000306658 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms