RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 ADAMTSL3P82987 1691 aa25.2■■□□□ 1.63
SCAND1-201ENST00000305978 ARHGAP5Q13017 1502 aa25.19■■□□□ 1.62
SCAND1-201ENST00000305978 BCORL1Q5H9F3 1711 aa25.19■■□□□ 1.62
SCAND1-201ENST00000305978 POGZQ7Z3K3 1410 aa25.18■■□□□ 1.62
SCAND1-201ENST00000305978 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
SCAND1-201ENST00000305978 SCAPERQ9BY12 1400 aa25.17■■□□□ 1.62
SCAND1-201ENST00000305978 ZFYVE16Q7Z3T8 1539 aa25.17■■□□□ 1.62
SCAND1-201ENST00000305978 EFCAB2Q5VUJ9 269 aa25.15■■□□□ 1.62
SCAND1-201ENST00000305978 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
SCAND1-201ENST00000305978 MAGI2Q86UL8 1455 aa25.14■■□□□ 1.61
SCAND1-201ENST00000305978 ITSN2Q9NZM3 1697 aa25.1■■□□□ 1.61
SCAND1-201ENST00000305978 YEATS2Q9ULM3 1422 aa25.1■■□□□ 1.61
SCAND1-201ENST00000305978 MADDQ8WXG6 1647 aa25.09■■□□□ 1.61
SCAND1-201ENST00000305978 KDM5CP41229 1560 aa25.09■■□□□ 1.61
SCAND1-201ENST00000305978 ZNF518AQ6AHZ1 1483 aa25.08■■□□□ 1.6
SCAND1-201ENST00000305978 ABCC1P33527 1531 aa25.07■■□□□ 1.6
SCAND1-201ENST00000305978 HECW2Q9P2P5 1572 aa25.05■■□□□ 1.6
SCAND1-201ENST00000305978 ARID4BQ4LE39 1312 aaPredicted RBP25.03■■□□□ 1.6
SCAND1-201ENST00000305978 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
SCAND1-201ENST00000305978 PTPRMP28827 1452 aa25.01■■□□□ 1.59
SCAND1-201ENST00000305978 EHBP1L1Q8N3D4 1523 aa25.01■■□□□ 1.59
SCAND1-201ENST00000305978 SAMD9LQ8IVG5 1584 aa25.01■■□□□ 1.59
SCAND1-201ENST00000305978 ARHGEF12Q9NZN5 1544 aa25■■□□□ 1.59
SCAND1-201ENST00000305978 FER1L4A9Z1Z3 1794 aa25■■□□□ 1.59
SCAND1-201ENST00000305978 ATP10AO60312 1499 aa24.99■■□□□ 1.59
SCAND1-201ENST00000305978 GPATCH8Q9UKJ3 1502 aaKnown RBP24.99■■□□□ 1.59
SCAND1-201ENST00000305978 LOC105371045A0A1W2PR82 267 aa24.98■■□□□ 1.59
SCAND1-201ENST00000305978 ABCA6Q8N139 1617 aa24.97■■□□□ 1.59
SCAND1-201ENST00000305978 DIP2CQ9Y2E4 1556 aa24.97■■□□□ 1.59
SCAND1-201ENST00000305978 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
SCAND1-201ENST00000305978 C9orf84Q5VXU9 1444 aa24.96■■□□□ 1.59
SCAND1-201ENST00000305978 AFAP1Q8N556 730 aa24.95■■□□□ 1.58
SCAND1-201ENST00000305978 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
SCAND1-201ENST00000305978 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.58
SCAND1-201ENST00000305978 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
SCAND1-201ENST00000305978 MLH3Q9UHC1 1453 aa24.94■■□□□ 1.58
SCAND1-201ENST00000305978 REREQ9P2R6 1566 aa24.93■■□□□ 1.58
SCAND1-201ENST00000305978 SYCP2Q9BX26 1530 aa24.92■■□□□ 1.58
SCAND1-201ENST00000305978 SUPT6HQ7KZ85 1726 aaKnown RBP24.92■■□□□ 1.58
SCAND1-201ENST00000305978 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
SCAND1-201ENST00000305978 VPS8Q8N3P4 1428 aa24.89■■□□□ 1.58
SCAND1-201ENST00000305978 PLEKHH2Q8IVE3 1493 aa24.87■■□□□ 1.57
SCAND1-201ENST00000305978 ZNF777Q9ULD5 760 aaPredicted RBP24.86■■□□□ 1.57
SCAND1-201ENST00000305978 MYT1LQ9UL68 1186 aa24.84■■□□□ 1.57
SCAND1-201ENST00000305978 KIAA1107Q9UPP5 1409 aa24.84■■□□□ 1.57
SCAND1-201ENST00000305978 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
SCAND1-201ENST00000305978 INO80Q9ULG1 1556 aaPredicted RBP24.83■■□□□ 1.57
SCAND1-201ENST00000305978 MLECQ14165 292 aa24.82■■□□□ 1.56
SCAND1-201ENST00000305978 NCOA2Q15596 1464 aa24.81■■□□□ 1.56
SCAND1-201ENST00000305978 AGLP35573 1532 aa24.81■■□□□ 1.56
SCAND1-201ENST00000305978 ATP7AQ04656 1500 aa24.8■■□□□ 1.56
SCAND1-201ENST00000305978 HNRNPMP52272 730 aaKnown RBP eCLIP24.78■■□□□ 1.56
SCAND1-201ENST00000305978 MAP3K1Q13233 1512 aa24.76■■□□□ 1.55
SCAND1-201ENST00000305978 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
SCAND1-201ENST00000305978 ADGBQ8N7X0 1667 aa24.75■■□□□ 1.55
SCAND1-201ENST00000305978 LMTK3Q96Q04 1460 aa24.75■■□□□ 1.55
SCAND1-201ENST00000305978 SPAG9O60271 1321 aaKnown RBP24.74■■□□□ 1.55
SCAND1-201ENST00000305978 PREX1Q8TCU6 1659 aa24.72■■□□□ 1.55
SCAND1-201ENST00000305978 MBD5Q9P267 1494 aa24.72■■□□□ 1.55
SCAND1-201ENST00000305978 C3P01024 1663 aa24.72■■□□□ 1.55
SCAND1-201ENST00000305978 PLXNC1O60486 1568 aa24.71■■□□□ 1.55
SCAND1-201ENST00000305978 ZNF644Q9H582 1327 aaPredicted RBP24.71■■□□□ 1.55
SCAND1-201ENST00000305978 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
SCAND1-201ENST00000305978 SETD1BQ9UPS6 1966 aaKnown RBP24.69■■□□□ 1.54
SCAND1-201ENST00000305978 PLPPR3Q6T4P5 718 aa24.68■■□□□ 1.54
SCAND1-201ENST00000305978 MROH2AA6NES4 1674 aa24.66■■□□□ 1.54
SCAND1-201ENST00000305978 A2MP01023 1474 aa24.64■■□□□ 1.54
SCAND1-201ENST00000305978 ARHGEF5Q12774 1597 aa24.64■■□□□ 1.54
SCAND1-201ENST00000305978 CCDC141Q6ZP82 1450 aa24.64■■□□□ 1.53
SCAND1-201ENST00000305978 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
SCAND1-201ENST00000305978 KANK4Q5T7N3 995 aaPredicted RBP24.61■■□□□ 1.53
SCAND1-201ENST00000305978 CLTCQ00610 1675 aaKnown RBP24.6■■□□□ 1.53
SCAND1-201ENST00000305978 CEBPAP49715 358 aaPredicted RBP24.59■■□□□ 1.53
SCAND1-201ENST00000305978 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
SCAND1-201ENST00000305978 MYOM3Q5VTT5 1437 aa24.55■■□□□ 1.52
SCAND1-201ENST00000305978 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
SCAND1-201ENST00000305978 HSPA2P54652 639 aa24.53■■□□□ 1.52
SCAND1-201ENST00000305978 RSPH4AQ5TD94 716 aa24.53■■□□□ 1.52
SCAND1-201ENST00000305978 MAST1Q9Y2H9 1570 aa24.53■■□□□ 1.52
SCAND1-201ENST00000305978 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
SCAND1-201ENST00000305978 UHRF1BP1Q6BDS2 1440 aa24.5■■□□□ 1.51
SCAND1-201ENST00000305978 CROCC2H7BZ55 1655 aa24.5■■□□□ 1.51
SCAND1-201ENST00000305978 APLP2Q06481 763 aa24.49■■□□□ 1.51
SCAND1-201ENST00000305978 DHX29Q7Z478 1369 aaKnown RBP24.49■■□□□ 1.51
SCAND1-201ENST00000305978 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
SCAND1-201ENST00000305978 PTPN23Q9H3S7 1636 aa24.47■■□□□ 1.51
SCAND1-201ENST00000305978 NPATQ14207 1427 aa24.44■■□□□ 1.5
SCAND1-201ENST00000305978 GGT6Q6P531 493 aa24.44■■□□□ 1.5
SCAND1-201ENST00000305978 ZMYM3Q14202 1370 aa24.43■■□□□ 1.5
SCAND1-201ENST00000305978 TSPY4P0CV99 314 aa24.43■■□□□ 1.5
SCAND1-201ENST00000305978 TSPY10P0CW01 314 aa24.43■■□□□ 1.5
SCAND1-201ENST00000305978 FAM135AQ9P2D6 1515 aa24.42■■□□□ 1.5
SCAND1-201ENST00000305978 MYO3AQ8NEV4 1616 aa24.42■■□□□ 1.5
SCAND1-201ENST00000305978 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
SCAND1-201ENST00000305978 PPP6R1Q9UPN7 881 aa24.41■■□□□ 1.5
SCAND1-201ENST00000305978 EIF2AK4Q9P2K8 1649 aaKnown RBP24.41■■□□□ 1.5
SCAND1-201ENST00000305978 RNF17Q9BXT8 1623 aaKnown RBP24.4■■□□□ 1.5
SCAND1-201ENST00000305978 DNMT1P26358 1616 aaKnown RBP24.39■■□□□ 1.49
SCAND1-201ENST00000305978 KDM5DQ9BY66 1539 aa24.38■■□□□ 1.49
SCAND1-201ENST00000305978 FGD6Q6ZV73 1430 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms