RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 NISCHQ9Y2I1 1504 aa38.64■■■■□ 3.78
SCAND1-201ENST00000305978 CCDC180Q9P1Z9 1646 aa34.66■■■■□ 3.14
SCAND1-201ENST00000305978 ABCC9O60706 1549 aa34.1■■■■□ 3.05
SCAND1-201ENST00000305978 RB1CC1Q8TDY2 1594 aa32.71■■■□□ 2.83
SCAND1-201ENST00000305978 NACADO15069 1562 aa32.57■■■□□ 2.8
SCAND1-201ENST00000305978 DCAF8L2P0C7V8 631 aa32.28■■■□□ 2.76
SCAND1-201ENST00000305978 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
SCAND1-201ENST00000305978 UNC13AQ9UPW8 1703 aa32.14■■■□□ 2.74
SCAND1-201ENST00000305978 ZCCHC6Q5VYS8 1495 aaKnown RBP32.13■■■□□ 2.73
SCAND1-201ENST00000305978 DCAF1Q9Y4B6 1507 aa31.98■■■□□ 2.71
SCAND1-201ENST00000305978 BICRAQ9NZM4 1560 aa31.76■■■□□ 2.67
SCAND1-201ENST00000305978 PABPN1Q86U42 306 aaKnown RBP eCLIP31.72■■■□□ 2.67
SCAND1-201ENST00000305978 DNAJC5BQ9UF47 199 aa31.58■■■□□ 2.65
SCAND1-201ENST00000305978 SCRIBQ14160 1630 aa31.51■■■□□ 2.63
SCAND1-201ENST00000305978 SHROOM4Q9ULL8 1493 aa31.36■■■□□ 2.61
SCAND1-201ENST00000305978 EIF4G1Q04637 1599 aaKnown RBP30.92■■■□□ 2.54
SCAND1-201ENST00000305978 CC2D2AQ9P2K1 1620 aa30.91■■■□□ 2.54
SCAND1-201ENST00000305978 CECR2Q9BXF3 1484 aa30.69■■■□□ 2.5
SCAND1-201ENST00000305978 SMARCA4P51532 1647 aa30.13■■■□□ 2.41
SCAND1-201ENST00000305978 NCAPD3P42695 1498 aa30■■■□□ 2.39
SCAND1-201ENST00000305978 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
SCAND1-201ENST00000305978 ATAD2BQ9ULI0 1458 aa29.97■■■□□ 2.39
SCAND1-201ENST00000305978 SMARCA2P51531 1590 aa29.95■■■□□ 2.39
SCAND1-201ENST00000305978 HMGXB3Q12766 1538 aa29.89■■■□□ 2.38
SCAND1-201ENST00000305978 PEG3Q9GZU2 1588 aa29.83■■■□□ 2.37
SCAND1-201ENST00000305978 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
SCAND1-201ENST00000305978 BAZ1BQ9UIG0 1483 aaKnown RBP29.71■■■□□ 2.35
SCAND1-201ENST00000305978 WIZO95785 1651 aa29.5■■■□□ 2.31
SCAND1-201ENST00000305978 NESP48681 1621 aa29.42■■■□□ 2.3
SCAND1-201ENST00000305978 ERCC6Q03468 1493 aa29.41■■■□□ 2.3
SCAND1-201ENST00000305978 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
SCAND1-201ENST00000305978 CUX2O14529 1486 aa29.27■■■□□ 2.28
SCAND1-201ENST00000305978 RSF1Q96T23 1441 aaPredicted RBP29.25■■■□□ 2.27
SCAND1-201ENST00000305978 KIF21AQ7Z4S6 1674 aa29.2■■■□□ 2.26
SCAND1-201ENST00000305978 THOC2Q8NI27 1593 aaKnown RBP29.15■■■□□ 2.26
SCAND1-201ENST00000305978 TOP2AP11388 1531 aaKnown RBP29.13■■■□□ 2.25
SCAND1-201ENST00000305978 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
SCAND1-201ENST00000305978 PDS5BQ9NTI5 1447 aa29.06■■■□□ 2.24
SCAND1-201ENST00000305978 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
SCAND1-201ENST00000305978 CFTRP13569 1480 aa28.86■■■□□ 2.21
SCAND1-201ENST00000305978 MRC2Q9UBG0 1479 aa28.83■■■□□ 2.21
SCAND1-201ENST00000305978 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
SCAND1-201ENST00000305978 WDR62O43379 1518 aa28.79■■■□□ 2.2
SCAND1-201ENST00000305978 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SCAND1-201ENST00000305978 CCDC88BA6NC98 1476 aa28.74■■■□□ 2.19
SCAND1-201ENST00000305978 DNAJC5Q9H3Z4 198 aa28.72■■■□□ 2.19
SCAND1-201ENST00000305978 URB2Q14146 1524 aaKnown RBP28.54■■■□□ 2.16
SCAND1-201ENST00000305978 TOPBP1Q92547 1522 aa28.31■■■□□ 2.12
SCAND1-201ENST00000305978 DNMBPQ6XZF7 1577 aa28.28■■■□□ 2.12
SCAND1-201ENST00000305978 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
SCAND1-201ENST00000305978 IFT140Q96RY7 1462 aa28.19■■■□□ 2.1
SCAND1-201ENST00000305978 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
SCAND1-201ENST00000305978 ZNF608Q9ULD9 1512 aaPredicted RBP28.11■■■□□ 2.09
SCAND1-201ENST00000305978 TARBP1Q13395 1621 aaKnown RBP28.09■■■□□ 2.09
SCAND1-201ENST00000305978 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
SCAND1-201ENST00000305978 POLA1P09884 1462 aaPredicted RBP28.03■■■□□ 2.08
SCAND1-201ENST00000305978 CUX1P39880 1505 aa27.97■■■□□ 2.07
SCAND1-201ENST00000305978 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
SCAND1-201ENST00000305978 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.06
SCAND1-201ENST00000305978 OSCARQ8IYS5 282 aa27.89■■■□□ 2.06
SCAND1-201ENST00000305978 AQRO60306 1485 aaKnown RBP eCLIP27.88■■■□□ 2.05
SCAND1-201ENST00000305978 SOGA1O94964 1423 aa27.86■■■□□ 2.05
SCAND1-201ENST00000305978 CHD1O14646 1710 aa27.85■■■□□ 2.05
SCAND1-201ENST00000305978 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
SCAND1-201ENST00000305978 TDRD9Q8NDG6 1382 aaKnown RBP27.73■■■□□ 2.03
SCAND1-201ENST00000305978 BIVM-ERCC5R4GMW8 1640 aa27.71■■■□□ 2.03
SCAND1-201ENST00000305978 PBRM1Q86U86 1689 aa27.69■■■□□ 2.02
SCAND1-201ENST00000305978 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
SCAND1-201ENST00000305978 RIMBP3CA6NJZ7 1639 aa27.65■■■□□ 2.02
SCAND1-201ENST00000305978 RIMBP3BA6NNM3 1639 aa27.65■■■□□ 2.02
SCAND1-201ENST00000305978 RIMBP3Q9UFD9 1639 aa27.65■■■□□ 2.02
SCAND1-201ENST00000305978 SYNJ1O43426 1573 aa27.64■■■□□ 2.01
SCAND1-201ENST00000305978 SNAPC4Q5SXM2 1469 aa27.64■■■□□ 2.01
SCAND1-201ENST00000305978 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
SCAND1-201ENST00000305978 ABCA10Q8WWZ4 1543 aa27.62■■■□□ 2.01
SCAND1-201ENST00000305978 GRIN2BQ13224 1484 aa27.61■■■□□ 2.01
SCAND1-201ENST00000305978 TRIM41Q8WV44 630 aa27.6■■■□□ 2.01
SCAND1-201ENST00000305978 MAGI1Q96QZ7 1491 aaPredicted RBP27.59■■■□□ 2.01
SCAND1-201ENST00000305978 WRNQ14191 1432 aaPredicted RBP eCLIP27.58■■■□□ 2.01
SCAND1-201ENST00000305978 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
SCAND1-201ENST00000305978 FBLN2P98095 1184 aa27.55■■■□□ 2
SCAND1-201ENST00000305978 ARHGEF11O15085 1522 aa27.55■■■□□ 2
SCAND1-201ENST00000305978 SYNJ2O15056 1496 aa27.49■■□□□ 1.99
SCAND1-201ENST00000305978 CLASP1Q7Z460 1538 aa27.45■■□□□ 1.98
SCAND1-201ENST00000305978 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
SCAND1-201ENST00000305978 ADAMTS12P58397 1594 aa27.37■■□□□ 1.97
SCAND1-201ENST00000305978 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
SCAND1-201ENST00000305978 ARAP1Q96P48 1450 aa27.29■■□□□ 1.96
SCAND1-201ENST00000305978 GRIN2AQ12879 1464 aa27.28■■□□□ 1.96
SCAND1-201ENST00000305978 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
SCAND1-201ENST00000305978 CEP170Q5SW79 1584 aa27.2■■□□□ 1.94
SCAND1-201ENST00000305978 CYB5RLQ6IPT4 315 aa27.2■■□□□ 1.94
SCAND1-201ENST00000305978 NUP160Q12769 1436 aa27.16■■□□□ 1.94
SCAND1-201ENST00000305978 SHROOM2Q13796 1616 aa27.09■■□□□ 1.93
SCAND1-201ENST00000305978 CUL7Q14999 1698 aa27.05■■□□□ 1.92
SCAND1-201ENST00000305978 KIF27Q86VH2 1401 aa27.04■■□□□ 1.92
SCAND1-201ENST00000305978 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
SCAND1-201ENST00000305978 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
SCAND1-201ENST00000305978 IGF1RP08069 1367 aa26.95■■□□□ 1.9
SCAND1-201ENST00000305978 PRG4Q92954 1404 aaPredicted RBP26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms