RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 RIMBP3CA6NJZ7 1639 aa8.74□□□□□ -1.01
TTC39C-201ENST00000304621 RIMBP3BA6NNM3 1639 aa8.74□□□□□ -1.01
TTC39C-201ENST00000304621 RIMBP3Q9UFD9 1639 aa8.74□□□□□ -1.01
TTC39C-201ENST00000304621 ZNF644Q9H582 1327 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-201ENST00000304621 TTC37Q6PGP7 1564 aa8.73□□□□□ -1.01
TTC39C-201ENST00000304621 MIA2Q96PC5 1412 aa8.73□□□□□ -1.01
TTC39C-201ENST00000304621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.73□□□□□ -1.01
TTC39C-201ENST00000304621 ITSN2Q9NZM3 1697 aa8.72□□□□□ -1.01
TTC39C-201ENST00000304621 KCNA4P22459 653 aa8.71□□□□□ -1.02
TTC39C-201ENST00000304621 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
TTC39C-201ENST00000304621 CDC42BPBQ9Y5S2 1711 aa8.7□□□□□ -1.02
TTC39C-201ENST00000304621 KCNH8Q96L42 1107 aa8.7□□□□□ -1.02
TTC39C-201ENST00000304621 PREX2Q70Z35 1606 aa8.7□□□□□ -1.02
TTC39C-201ENST00000304621 WDR7Q9Y4E6 1490 aa8.69□□□□□ -1.02
TTC39C-201ENST00000304621 CFDP1Q9UEE9 299 aaPredicted RBP8.69□□□□□ -1.02
TTC39C-201ENST00000304621 ASXL2Q76L83 1435 aa8.68□□□□□ -1.02
TTC39C-201ENST00000304621 DNMT1P26358 1616 aaKnown RBP8.68□□□□□ -1.02
TTC39C-201ENST00000304621 RAB3GAP2Q9H2M9 1393 aa8.68□□□□□ -1.02
TTC39C-201ENST00000304621 ABCC5O15440 1437 aa8.68□□□□□ -1.02
TTC39C-201ENST00000304621 SAMD9LQ8IVG5 1584 aa8.68□□□□□ -1.02
TTC39C-201ENST00000304621 DAPK1P53355 1430 aa8.67□□□□□ -1.02
TTC39C-201ENST00000304621 SETD5Q9C0A6 1442 aa8.67□□□□□ -1.02
TTC39C-201ENST00000304621 RNF216Q9NWF9 866 aaPredicted RBP8.67□□□□□ -1.02
TTC39C-201ENST00000304621 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
TTC39C-201ENST00000304621 CYB5RLQ6IPT4 315 aa8.66□□□□□ -1.02
TTC39C-201ENST00000304621 CCER1Q8TC90 406 aaPredicted RBP8.66□□□□□ -1.02
TTC39C-201ENST00000304621 CHIC2Q9UKJ5 165 aa8.66□□□□□ -1.02
TTC39C-201ENST00000304621 MYO5CQ9NQX4 1742 aa8.66□□□□□ -1.02
TTC39C-201ENST00000304621 CROCC2H7BZ55 1655 aa8.65□□□□□ -1.02
TTC39C-201ENST00000304621 KDM6BO15054 1643 aa8.65□□□□□ -1.02
TTC39C-201ENST00000304621 NAIPQ13075 1403 aa8.65□□□□□ -1.02
TTC39C-201ENST00000304621 HOXD11P31277 338 aaPredicted RBP8.65□□□□□ -1.03
TTC39C-201ENST00000304621 ARHGAP5Q13017 1502 aa8.65□□□□□ -1.03
TTC39C-201ENST00000304621 HFM1A2PYH4 1435 aa8.65□□□□□ -1.03
TTC39C-201ENST00000304621 DHX57Q6P158 1386 aaKnown RBP8.64□□□□□ -1.03
TTC39C-201ENST00000304621 ABCA9Q8IUA7 1624 aa8.64□□□□□ -1.03
TTC39C-201ENST00000304621 RRP7BPQ9NSQ0 103 aa8.64□□□□□ -1.03
TTC39C-201ENST00000304621 MBD5Q9P267 1494 aa8.64□□□□□ -1.03
TTC39C-201ENST00000304621 GCC2Q8IWJ2 1684 aa8.64□□□□□ -1.03
TTC39C-201ENST00000304621 PLCH2O75038 1416 aa8.64□□□□□ -1.03
TTC39C-201ENST00000304621 ARHGEF12Q9NZN5 1544 aa8.63□□□□□ -1.03
TTC39C-201ENST00000304621 NPM3O75607 178 aaKnown RBP8.63□□□□□ -1.03
TTC39C-201ENST00000304621 AKNAQ7Z591 1439 aa8.63□□□□□ -1.03
TTC39C-201ENST00000304621 SYCP2Q9BX26 1530 aa8.63□□□□□ -1.03
TTC39C-201ENST00000304621 HNRNPMP52272 730 aaKnown RBP eCLIP8.63□□□□□ -1.03
TTC39C-201ENST00000304621 ARHGEF5Q12774 1597 aa8.62□□□□□ -1.03
TTC39C-201ENST00000304621 NPM1P06748 294 aaKnown RBP eCLIP8.62□□□□□ -1.03
TTC39C-201ENST00000304621 ADGBQ8N7X0 1667 aa8.61□□□□□ -1.03
TTC39C-201ENST00000304621 MAPKBP1O60336 1514 aa8.61□□□□□ -1.03
TTC39C-201ENST00000304621 ROCK1Q13464 1354 aa8.6□□□□□ -1.03
TTC39C-201ENST00000304621 ABCC1P33527 1531 aa8.6□□□□□ -1.03
TTC39C-201ENST00000304621 ADGRL2O95490 1459 aa8.6□□□□□ -1.03
TTC39C-201ENST00000304621 ARAP3Q8WWN8 1544 aa8.6□□□□□ -1.03
TTC39C-201ENST00000304621 SHANK2Q9UPX8 1470 aa8.59□□□□□ -1.03
TTC39C-201ENST00000304621 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
TTC39C-201ENST00000304621 CCDC141Q6ZP82 1450 aa8.59□□□□□ -1.03
TTC39C-201ENST00000304621 NCOA1Q15788 1441 aa8.59□□□□□ -1.03
TTC39C-201ENST00000304621 KIAA1107Q9UPP5 1409 aa8.58□□□□□ -1.04
TTC39C-201ENST00000304621 TRAPPC8Q9Y2L5 1435 aa8.58□□□□□ -1.04
TTC39C-201ENST00000304621 EFCAB2Q5VUJ9 269 aa8.58□□□□□ -1.04
TTC39C-201ENST00000304621 FANCAO15360 1455 aa8.58□□□□□ -1.04
TTC39C-201ENST00000304621 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
TTC39C-201ENST00000304621 MAST1Q9Y2H9 1570 aa8.57□□□□□ -1.04
TTC39C-201ENST00000304621 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
TTC39C-201ENST00000304621 PLEKHH2Q8IVE3 1493 aa8.57□□□□□ -1.04
TTC39C-201ENST00000304621 CD109Q6YHK3 1445 aa8.56□□□□□ -1.04
TTC39C-201ENST00000304621 MAP3K4Q9Y6R4 1608 aa8.56□□□□□ -1.04
TTC39C-201ENST00000304621 DIP2BQ9P265 1576 aa8.55□□□□□ -1.04
TTC39C-201ENST00000304621 ANKRD30AQ9BXX3 1397 aa8.55□□□□□ -1.04
TTC39C-201ENST00000304621 GLI2P10070 1586 aa8.54□□□□□ -1.04
TTC39C-201ENST00000304621 ADGRL1O94910 1474 aa8.54□□□□□ -1.04
TTC39C-201ENST00000304621 TSPY4P0CV99 314 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 TSPY10P0CW01 314 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 AFAP1Q8N556 730 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 KIF15Q9NS87 1388 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 SCAPERQ9BY12 1400 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 PLXNC1O60486 1568 aa8.53□□□□□ -1.04
TTC39C-201ENST00000304621 ZFYVE16Q7Z3T8 1539 aa8.52□□□□□ -1.05
TTC39C-201ENST00000304621 ANKRD50Q9ULJ7 1429 aa8.52□□□□□ -1.05
TTC39C-201ENST00000304621 RSPH4AQ5TD94 716 aa8.52□□□□□ -1.05
TTC39C-201ENST00000304621 PPRC1Q5VV67 1664 aaKnown RBP8.52□□□□□ -1.05
TTC39C-201ENST00000304621 CLSPNQ9HAW4 1339 aa8.52□□□□□ -1.05
TTC39C-201ENST00000304621 INO80Q9ULG1 1556 aaPredicted RBP8.51□□□□□ -1.05
TTC39C-201ENST00000304621 PZPP20742 1482 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 TRIM52Q96A61 297 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 SIN3AQ96ST3 1273 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 CFAP74Q9C0B2 1584 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 FAM69CQ0P6D2 419 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 KIF13AQ9H1H9 1805 aa8.51□□□□□ -1.05
TTC39C-201ENST00000304621 ATP7AQ04656 1500 aa8.5□□□□□ -1.05
TTC39C-201ENST00000304621 SPAG9O60271 1321 aaKnown RBP8.49□□□□□ -1.05
TTC39C-201ENST00000304621 NEO1Q92859 1461 aa8.49□□□□□ -1.05
TTC39C-201ENST00000304621 MPHOSPH9Q99550 1183 aa8.49□□□□□ -1.05
TTC39C-201ENST00000304621 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
TTC39C-201ENST00000304621 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
TTC39C-201ENST00000304621 TSPOAP1O95153 1857 aa8.49□□□□□ -1.05
TTC39C-201ENST00000304621 RTEL1-TNFRSF6BF6WH68 1400 aa8.48□□□□□ -1.05
TTC39C-201ENST00000304621 KDM5CP41229 1560 aa8.48□□□□□ -1.05
TTC39C-201ENST00000304621 DUOX2Q9NRD8 1548 aa8.48□□□□□ -1.05
TTC39C-201ENST00000304621 FRMPD1Q5SYB0 1578 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms