RNA–Protein interactions for RNA: ENST00000304516.11

INO80E-201, Transcript of INO80 complex subunit E, humanhuman

TSL 2 BASIC

Gene INO80E, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-201ENST00000304516 SCAPERQ9BY12 1400 aa28.18■■■□□ 2.1
INO80E-201ENST00000304516 CDC42BPBQ9Y5S2 1711 aa28.17■■■□□ 2.1
INO80E-201ENST00000304516 PREX2Q70Z35 1606 aa28.14■■■□□ 2.1
INO80E-201ENST00000304516 POGZQ7Z3K3 1410 aa28.12■■■□□ 2.09
INO80E-201ENST00000304516 CDC42BPAQ5VT25 1732 aa28.12■■■□□ 2.09
INO80E-201ENST00000304516 ZMYM4Q5VZL5 1548 aa28.11■■■□□ 2.09
INO80E-201ENST00000304516 ARHGEF40Q8TER5 1519 aa28.11■■■□□ 2.09
INO80E-201ENST00000304516 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
INO80E-201ENST00000304516 MTUS2Q5JR59 1369 aa28.09■■■□□ 2.09
INO80E-201ENST00000304516 YEATS2Q9ULM3 1422 aa28.06■■■□□ 2.08
INO80E-201ENST00000304516 ZFYVE16Q7Z3T8 1539 aa28.06■■■□□ 2.08
INO80E-201ENST00000304516 MAGI2Q86UL8 1455 aa28.02■■■□□ 2.08
INO80E-201ENST00000304516 MAP3K1Q13233 1512 aa28.02■■■□□ 2.08
INO80E-201ENST00000304516 EHBP1L1Q8N3D4 1523 aa28.02■■■□□ 2.08
INO80E-201ENST00000304516 GPATCH8Q9UKJ3 1502 aaKnown RBP28.02■■■□□ 2.08
INO80E-201ENST00000304516 ZNF518AQ6AHZ1 1483 aa28.01■■■□□ 2.07
INO80E-201ENST00000304516 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
INO80E-201ENST00000304516 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.07
INO80E-201ENST00000304516 ABCC1P33527 1531 aa28■■■□□ 2.07
INO80E-201ENST00000304516 KANK4Q5T7N3 995 aaPredicted RBP28■■■□□ 2.07
INO80E-201ENST00000304516 ARHGEF12Q9NZN5 1544 aa27.99■■■□□ 2.07
INO80E-201ENST00000304516 LRRC9Q6ZRR7 1453 aa27.98■■■□□ 2.07
INO80E-201ENST00000304516 ITSN2Q9NZM3 1697 aa27.98■■■□□ 2.07
INO80E-201ENST00000304516 CCNB3Q8WWL7 1395 aa27.97■■■□□ 2.07
INO80E-201ENST00000304516 ZNF777Q9ULD5 760 aaPredicted RBP27.97■■■□□ 2.07
INO80E-201ENST00000304516 SIGLEC1Q9BZZ2 1709 aa27.97■■■□□ 2.07
INO80E-201ENST00000304516 KDM5CP41229 1560 aa27.97■■■□□ 2.07
INO80E-201ENST00000304516 BCORL1Q5H9F3 1711 aa27.96■■■□□ 2.07
INO80E-201ENST00000304516 ADAMTSL3P82987 1691 aa27.96■■■□□ 2.07
INO80E-201ENST00000304516 SAMD9LQ8IVG5 1584 aa27.96■■■□□ 2.07
INO80E-201ENST00000304516 TRAPPC8Q9Y2L5 1435 aa27.95■■■□□ 2.07
INO80E-201ENST00000304516 HECW2Q9P2P5 1572 aa27.92■■■□□ 2.06
INO80E-201ENST00000304516 CFDP1Q9UEE9 299 aaPredicted RBP27.92■■■□□ 2.06
INO80E-201ENST00000304516 MYT1LQ9UL68 1186 aa27.9■■■□□ 2.06
INO80E-201ENST00000304516 SYCP2Q9BX26 1530 aa27.9■■■□□ 2.06
INO80E-201ENST00000304516 ATP10AO60312 1499 aa27.89■■■□□ 2.06
INO80E-201ENST00000304516 NCOA2Q15596 1464 aa27.89■■■□□ 2.06
INO80E-201ENST00000304516 SUPT6HQ7KZ85 1726 aaKnown RBP27.88■■■□□ 2.05
INO80E-201ENST00000304516 MADDQ8WXG6 1647 aa27.88■■■□□ 2.05
INO80E-201ENST00000304516 APLP2Q06481 763 aa27.87■■■□□ 2.05
INO80E-201ENST00000304516 C9orf84Q5VXU9 1444 aa27.86■■■□□ 2.05
INO80E-201ENST00000304516 MLH3Q9UHC1 1453 aa27.86■■■□□ 2.05
INO80E-201ENST00000304516 HNRNPMP52272 730 aaKnown RBP eCLIP27.85■■■□□ 2.05
INO80E-201ENST00000304516 DIP2CQ9Y2E4 1556 aa27.84■■■□□ 2.05
INO80E-201ENST00000304516 ABCA6Q8N139 1617 aa27.84■■■□□ 2.05
INO80E-201ENST00000304516 PTPRMP28827 1452 aa27.83■■■□□ 2.04
INO80E-201ENST00000304516 ZNF644Q9H582 1327 aaPredicted RBP27.82■■■□□ 2.04
INO80E-201ENST00000304516 KIDINS220Q9ULH0 1771 aa27.82■■■□□ 2.04
INO80E-201ENST00000304516 MLECQ14165 292 aa27.82■■■□□ 2.04
INO80E-201ENST00000304516 KIAA1107Q9UPP5 1409 aa27.81■■■□□ 2.04
INO80E-201ENST00000304516 PLEKHH2Q8IVE3 1493 aa27.81■■■□□ 2.04
INO80E-201ENST00000304516 RIMS1Q86UR5 1692 aaKnown RBP27.79■■■□□ 2.04
INO80E-201ENST00000304516 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
INO80E-201ENST00000304516 REREQ9P2R6 1566 aa27.74■■■□□ 2.03
INO80E-201ENST00000304516 FER1L4A9Z1Z3 1794 aa27.73■■■□□ 2.03
INO80E-201ENST00000304516 ATP7AQ04656 1500 aa27.71■■■□□ 2.03
INO80E-201ENST00000304516 MBD5Q9P267 1494 aa27.71■■■□□ 2.03
INO80E-201ENST00000304516 INO80Q9ULG1 1556 aaPredicted RBP27.7■■■□□ 2.03
INO80E-201ENST00000304516 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.02
INO80E-201ENST00000304516 PLPPR3Q6T4P5 718 aa27.68■■■□□ 2.02
INO80E-201ENST00000304516 MYOM3Q5VTT5 1437 aa27.67■■■□□ 2.02
INO80E-201ENST00000304516 PPARGC1BQ86YN6 1023 aaKnown RBP27.65■■■□□ 2.02
INO80E-201ENST00000304516 AGLP35573 1532 aa27.65■■■□□ 2.02
INO80E-201ENST00000304516 CCDC141Q6ZP82 1450 aa27.6■■■□□ 2.01
INO80E-201ENST00000304516 MIA2Q96PC5 1412 aa27.59■■■□□ 2.01
INO80E-201ENST00000304516 A2MP01023 1474 aa27.57■■■□□ 2
INO80E-201ENST00000304516 PLXNC1O60486 1568 aa27.56■■■□□ 2
INO80E-201ENST00000304516 ADGBQ8N7X0 1667 aa27.56■■■□□ 2
INO80E-201ENST00000304516 ARHGEF5Q12774 1597 aa27.55■■■□□ 2
INO80E-201ENST00000304516 RTEL1-TNFRSF6BF6WH68 1400 aa27.55■■■□□ 2
INO80E-201ENST00000304516 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
INO80E-201ENST00000304516 CEBPAP49715 358 aaPredicted RBP27.54■■■□□ 2
INO80E-201ENST00000304516 RSPH4AQ5TD94 716 aa27.52■■■□□ 2
INO80E-201ENST00000304516 LMTK3Q96Q04 1460 aa27.5■■□□□ 1.99
INO80E-201ENST00000304516 PTPN23Q9H3S7 1636 aa27.5■■□□□ 1.99
INO80E-201ENST00000304516 ESF1Q9H501 851 aaKnown RBP27.5■■□□□ 1.99
INO80E-201ENST00000304516 TCOF1Q13428 1488 aaKnown RBP27.48■■□□□ 1.99
INO80E-201ENST00000304516 C3P01024 1663 aa27.46■■□□□ 1.99
INO80E-201ENST00000304516 TSPY4P0CV99 314 aa27.46■■□□□ 1.99
INO80E-201ENST00000304516 TSPY10P0CW01 314 aa27.46■■□□□ 1.99
INO80E-201ENST00000304516 DHX29Q7Z478 1369 aaKnown RBP27.44■■□□□ 1.98
INO80E-201ENST00000304516 GGT6Q6P531 493 aa27.43■■□□□ 1.98
INO80E-201ENST00000304516 CNTLNQ9NXG0 1405 aa27.42■■□□□ 1.98
INO80E-201ENST00000304516 MAST1Q9Y2H9 1570 aa27.41■■□□□ 1.98
INO80E-201ENST00000304516 CLTCQ00610 1675 aaKnown RBP27.4■■□□□ 1.98
INO80E-201ENST00000304516 HSPA2P54652 639 aa27.39■■□□□ 1.98
INO80E-201ENST00000304516 PREX1Q8TCU6 1659 aa27.39■■□□□ 1.98
INO80E-201ENST00000304516 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
INO80E-201ENST00000304516 ABCC5O15440 1437 aa27.36■■□□□ 1.97
INO80E-201ENST00000304516 KIF3BO15066 747 aa27.36■■□□□ 1.97
INO80E-201ENST00000304516 CROCC2H7BZ55 1655 aa27.35■■□□□ 1.97
INO80E-201ENST00000304516 ZMYM3Q14202 1370 aa27.34■■□□□ 1.97
INO80E-201ENST00000304516 DNMT1P26358 1616 aaKnown RBP27.33■■□□□ 1.97
INO80E-201ENST00000304516 DAPK1P53355 1430 aa27.33■■□□□ 1.97
INO80E-201ENST00000304516 FAM50AQ14320 339 aaKnown RBP27.33■■□□□ 1.97
INO80E-201ENST00000304516 SETD1BQ9UPS6 1966 aaKnown RBP27.33■■□□□ 1.97
INO80E-201ENST00000304516 UHRF1BP1Q6BDS2 1440 aa27.29■■□□□ 1.96
INO80E-201ENST00000304516 SHANK2Q9UPX8 1470 aa27.29■■□□□ 1.96
INO80E-201ENST00000304516 PPP6R1Q9UPN7 881 aa27.28■■□□□ 1.96
INO80E-201ENST00000304516 RRBP1Q9P2E9 1410 aaKnown RBP27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms