RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 FYCO1Q9BQS8 1478 aa19.21■□□□□ 0.67
SDC2-201ENST00000302190 NBR1Q14596 966 aa19.2■□□□□ 0.66
SDC2-201ENST00000302190 PPP1R15AO75807 674 aaPredicted RBP19.19■□□□□ 0.66
SDC2-201ENST00000302190 MAGI3Q5TCQ9 1506 aa19.18■□□□□ 0.66
SDC2-201ENST00000302190 EPRSP07814 1512 aaKnown RBP19.18■□□□□ 0.66
SDC2-201ENST00000302190 B4GALNT3Q6L9W6 998 aa19.17■□□□□ 0.66
SDC2-201ENST00000302190 RBM19Q9Y4C8 960 aaKnown RBP19.16■□□□□ 0.66
SDC2-201ENST00000302190 NUP153P49790 1475 aaKnown RBP19.16■□□□□ 0.66
SDC2-201ENST00000302190 CYB5RLQ6IPT4 315 aa19.16■□□□□ 0.66
SDC2-201ENST00000302190 PLEKHD1A6NEE1 506 aa19.14■□□□□ 0.66
SDC2-201ENST00000302190 RTL5Q5HYW3 569 aaPredicted RBP19.13■□□□□ 0.65
SDC2-201ENST00000302190 HSPA5P11021 654 aaKnown RBP19.13■□□□□ 0.65
SDC2-201ENST00000302190 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
SDC2-201ENST00000302190 RRBP1Q9P2E9 1410 aaKnown RBP19.13■□□□□ 0.65
SDC2-201ENST00000302190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.12■□□□□ 0.651e-7■□□□□ 10.2
SDC2-201ENST00000302190 CCDC136Q96JN2 1154 aa19.11■□□□□ 0.65
SDC2-201ENST00000302190 DAXXQ9UER7 740 aaPredicted RBP19.1■□□□□ 0.65
SDC2-201ENST00000302190 NCOA2Q15596 1464 aa19.1■□□□□ 0.65
SDC2-201ENST00000302190 RAPGEF6Q8TEU7 1601 aa19.07■□□□□ 0.64
SDC2-201ENST00000302190 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
SDC2-201ENST00000302190 HECW1Q76N89 1606 aa19.06■□□□□ 0.64
SDC2-201ENST00000302190 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
SDC2-201ENST00000302190 ATP10BO94823 1461 aa19.04■□□□□ 0.64
SDC2-201ENST00000302190 CFAP43Q8NDM7 1665 aa19.04■□□□□ 0.64
SDC2-201ENST00000302190 PTPRKQ15262 1439 aa19.03■□□□□ 0.64
SDC2-201ENST00000302190 FGD6Q6ZV73 1430 aa19■□□□□ 0.63
SDC2-201ENST00000302190 CCER2I3L3R5 266 aa19■□□□□ 0.63
SDC2-201ENST00000302190 HNRNPMP52272 730 aaKnown RBP eCLIP19■□□□□ 0.635e-7■■■□□ 14.9
SDC2-201ENST00000302190 L3MBTL2Q969R5 705 aa19■□□□□ 0.63
SDC2-201ENST00000302190 UACAQ9BZF9 1416 aa18.99■□□□□ 0.63
SDC2-201ENST00000302190 ANP32AP39687 249 aaKnown RBP18.99■□□□□ 0.63
SDC2-201ENST00000302190 CCDC18Q5T9S5 1454 aa18.97■□□□□ 0.63
SDC2-201ENST00000302190 ARHGEF11O15085 1522 aa18.96■□□□□ 0.63
SDC2-201ENST00000302190 KIF14Q15058 1648 aa18.96■□□□□ 0.63
SDC2-201ENST00000302190 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
SDC2-201ENST00000302190 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
SDC2-201ENST00000302190 MPHOSPH9Q99550 1183 aa18.95■□□□□ 0.62
SDC2-201ENST00000302190 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
SDC2-201ENST00000302190 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
SDC2-201ENST00000302190 MAP3K1Q13233 1512 aa18.93■□□□□ 0.62
SDC2-201ENST00000302190 TSPY4P0CV99 314 aa18.92■□□□□ 0.62
SDC2-201ENST00000302190 TSPY10P0CW01 314 aa18.92■□□□□ 0.62
SDC2-201ENST00000302190 SUPT6HQ7KZ85 1726 aaKnown RBP18.92■□□□□ 0.62
SDC2-201ENST00000302190 NPM1P06748 294 aaKnown RBP eCLIP18.92■□□□□ 0.62
SDC2-201ENST00000302190 EHBP1L1Q8N3D4 1523 aa18.92■□□□□ 0.62
SDC2-201ENST00000302190 TROQ12816 1431 aaPredicted RBP18.91■□□□□ 0.62
SDC2-201ENST00000302190 CARD11Q9BXL7 1154 aa18.9■□□□□ 0.62
SDC2-201ENST00000302190 ABCA8O94911 1581 aa18.9■□□□□ 0.62
SDC2-201ENST00000302190 PPP4R2Q9NY27 417 aa18.89■□□□□ 0.62
SDC2-201ENST00000302190 ANO8Q9HCE9 1232 aaPredicted RBP18.88■□□□□ 0.61
SDC2-201ENST00000302190 SHROOM2Q13796 1616 aa18.87■□□□□ 0.61
SDC2-201ENST00000302190 ZBTB47Q9UFB7 747 aaPredicted RBP18.84■□□□□ 0.61
SDC2-201ENST00000302190 PTPN23Q9H3S7 1636 aa18.83■□□□□ 0.6
SDC2-201ENST00000302190 CCDC184Q52MB2 194 aa18.83■□□□□ 0.6
SDC2-201ENST00000302190 DCAF11Q8TEB1 546 aa18.83■□□□□ 0.6
SDC2-201ENST00000302190 PKD2Q13563 968 aa18.82■□□□□ 0.6
SDC2-201ENST00000302190 GPATCH8Q9UKJ3 1502 aaKnown RBP18.81■□□□□ 0.6
SDC2-201ENST00000302190 CC2D1BQ5T0F9 858 aaKnown RBP18.81■□□□□ 0.6
SDC2-201ENST00000302190 CHGAP10645 457 aaKnown RBP18.8■□□□□ 0.6
SDC2-201ENST00000302190 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
SDC2-201ENST00000302190 ABCC2Q92887 1545 aa18.8■□□□□ 0.6
SDC2-201ENST00000302190 AFAP1Q8N556 730 aa18.78■□□□□ 0.6
SDC2-201ENST00000302190 DEKP35659 375 aaKnown RBP18.78■□□□□ 0.6
SDC2-201ENST00000302190 CANXP27824 592 aaKnown RBP18.77■□□□□ 0.6
SDC2-201ENST00000302190 WASHC2AQ641Q2 1341 aa18.76■□□□□ 0.59
SDC2-201ENST00000302190 ADCY10Q96PN6 1610 aa18.76■□□□□ 0.59
SDC2-201ENST00000302190 PRKRIP1Q9H875 184 aaPredicted RBP18.76■□□□□ 0.59
SDC2-201ENST00000302190 LAS1LQ9Y4W2 734 aaKnown RBP18.75■□□□□ 0.59
SDC2-201ENST00000302190 ZCCHC11Q5TAX3 1644 aaKnown RBP18.74■□□□□ 0.59
SDC2-201ENST00000302190 NAIPQ13075 1403 aa18.74■□□□□ 0.59
SDC2-201ENST00000302190 KDM6BO15054 1643 aa18.73■□□□□ 0.59
SDC2-201ENST00000302190 CAMSAP2Q08AD1 1489 aa18.73■□□□□ 0.59
SDC2-201ENST00000302190 ARHGAP5Q13017 1502 aa18.72■□□□□ 0.59
SDC2-201ENST00000302190 ABCC5O15440 1437 aa18.72■□□□□ 0.59
SDC2-201ENST00000302190 ASXL2Q76L83 1435 aa18.72■□□□□ 0.59
SDC2-201ENST00000302190 TTC37Q6PGP7 1564 aa18.71■□□□□ 0.59
SDC2-201ENST00000302190 DAPK1P53355 1430 aa18.69■□□□□ 0.58
SDC2-201ENST00000302190 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.68■□□□□ 0.58
SDC2-201ENST00000302190 MSH5O43196 834 aa18.67■□□□□ 0.58
SDC2-201ENST00000302190 RTN4Q9NQC3 1192 aaKnown RBP18.67■□□□□ 0.58
SDC2-201ENST00000302190 ABCC10Q5T3U5 1492 aa18.67■□□□□ 0.58
SDC2-201ENST00000302190 FAM69CQ0P6D2 419 aa18.67■□□□□ 0.58
SDC2-201ENST00000302190 ARXQ96QS3 562 aa18.66■□□□□ 0.58
SDC2-201ENST00000302190 NOP58Q9Y2X3 529 aaKnown RBP18.66■□□□□ 0.58
SDC2-201ENST00000302190 WDR43Q15061 677 aaKnown RBP eCLIP18.66■□□□□ 0.58
SDC2-201ENST00000302190 EFCAB2Q5VUJ9 269 aa18.66■□□□□ 0.58
SDC2-201ENST00000302190 CDC42BPAQ5VT25 1732 aa18.65■□□□□ 0.58
SDC2-201ENST00000302190 MIA2Q96PC5 1412 aa18.65■□□□□ 0.58
SDC2-201ENST00000302190 RAPGEF3O95398 923 aa18.65■□□□□ 0.58
SDC2-201ENST00000302190 KDM5BQ9UGL1 1544 aa18.65■□□□□ 0.58
SDC2-201ENST00000302190 HFM1A2PYH4 1435 aa18.63■□□□□ 0.57
SDC2-201ENST00000302190 NEUROD2Q15784 382 aa18.63■□□□□ 0.57
SDC2-201ENST00000302190 ST20-MTHFSA0A0A6YYL1 179 aa18.63■□□□□ 0.57
SDC2-201ENST00000302190 C11orf95C9JLR9 678 aaPredicted RBP18.63■□□□□ 0.57
SDC2-201ENST00000302190 NBPF8Q3BBV2 869 aa18.63■□□□□ 0.57
SDC2-201ENST00000302190 NUP155O75694 1391 aa18.62■□□□□ 0.57
SDC2-201ENST00000302190 RIMBP3CA6NJZ7 1639 aa18.62■□□□□ 0.57
SDC2-201ENST00000302190 RIMBP3BA6NNM3 1639 aa18.62■□□□□ 0.57
SDC2-201ENST00000302190 RIMBP3Q9UFD9 1639 aa18.62■□□□□ 0.57
SDC2-201ENST00000302190 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms