RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 ARID4BQ4LE39 1312 aaPredicted RBP26.47■■□□□ 1.83
NPM1-201ENST00000296930 MAGI2Q86UL8 1455 aa26.47■■□□□ 1.83
NPM1-201ENST00000296930 FYCO1Q9BQS8 1478 aa26.47■■□□□ 1.83
NPM1-201ENST00000296930 POGZQ7Z3K3 1410 aa26.46■■□□□ 1.83
NPM1-201ENST00000296930 ZFYVE16Q7Z3T8 1539 aa26.45■■□□□ 1.83
NPM1-201ENST00000296930 HECW2Q9P2P5 1572 aa26.45■■□□□ 1.83
NPM1-201ENST00000296930 ARHGAP5Q13017 1502 aa26.43■■□□□ 1.82
NPM1-201ENST00000296930 YEATS2Q9ULM3 1422 aa26.41■■□□□ 1.82
NPM1-201ENST00000296930 PTPRMP28827 1452 aa26.41■■□□□ 1.82
NPM1-201ENST00000296930 CDC42BPBQ9Y5S2 1711 aa26.39■■□□□ 1.81
NPM1-201ENST00000296930 MADDQ8WXG6 1647 aa26.38■■□□□ 1.81
NPM1-201ENST00000296930 PREX2Q70Z35 1606 aa26.36■■□□□ 1.81
NPM1-201ENST00000296930 ZNF518AQ6AHZ1 1483 aa26.36■■□□□ 1.81
NPM1-201ENST00000296930 SIGLEC1Q9BZZ2 1709 aa26.33■■□□□ 1.81
NPM1-201ENST00000296930 ATP10AO60312 1499 aa26.31■■□□□ 1.8
NPM1-201ENST00000296930 KDM5CP41229 1560 aa26.31■■□□□ 1.8
NPM1-201ENST00000296930 CDC42BPAQ5VT25 1732 aa26.3■■□□□ 1.8
NPM1-201ENST00000296930 RIMS1Q86UR5 1692 aaKnown RBP26.3■■□□□ 1.8
NPM1-201ENST00000296930 AFAP1Q8N556 730 aa26.28■■□□□ 1.8
NPM1-201ENST00000296930 C9orf84Q5VXU9 1444 aa26.28■■□□□ 1.8
NPM1-201ENST00000296930 ABCC1P33527 1531 aa26.26■■□□□ 1.79
NPM1-201ENST00000296930 CEP162Q5TB80 1403 aa26.25■■□□□ 1.79
NPM1-201ENST00000296930 ITSN2Q9NZM3 1697 aa26.24■■□□□ 1.79
NPM1-201ENST00000296930 MYT1LQ9UL68 1186 aa26.23■■□□□ 1.79
NPM1-201ENST00000296930 FER1L4A9Z1Z3 1794 aa26.22■■□□□ 1.79
NPM1-201ENST00000296930 ARHGEF12Q9NZN5 1544 aa26.21■■□□□ 1.79
NPM1-201ENST00000296930 MLECQ14165 292 aa26.21■■□□□ 1.79
NPM1-201ENST00000296930 MLH3Q9UHC1 1453 aa26.21■■□□□ 1.79
NPM1-201ENST00000296930 TRAPPC8Q9Y2L5 1435 aa26.2■■□□□ 1.78
NPM1-201ENST00000296930 DIP2CQ9Y2E4 1556 aa26.19■■□□□ 1.78
NPM1-201ENST00000296930 GPATCH8Q9UKJ3 1502 aaKnown RBP26.19■■□□□ 1.78
NPM1-201ENST00000296930 MTUS2Q5JR59 1369 aa26.19■■□□□ 1.78
NPM1-201ENST00000296930 REREQ9P2R6 1566 aa26.17■■□□□ 1.78
NPM1-201ENST00000296930 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
NPM1-201ENST00000296930 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
NPM1-201ENST00000296930 ZNF777Q9ULD5 760 aaPredicted RBP26.15■■□□□ 1.78
NPM1-201ENST00000296930 CCNB3Q8WWL7 1395 aa26.14■■□□□ 1.77
NPM1-201ENST00000296930 LMTK3Q96Q04 1460 aa26.13■■□□□ 1.77
NPM1-201ENST00000296930 KIDINS220Q9ULH0 1771 aa26.12■■□□□ 1.77
NPM1-201ENST00000296930 EHBP1L1Q8N3D4 1523 aa26.12■■□□□ 1.77
NPM1-201ENST00000296930 PLPPR3Q6T4P5 718 aa26.11■■□□□ 1.77
NPM1-201ENST00000296930 CFDP1Q9UEE9 299 aaPredicted RBP26.11■■□□□ 1.77
NPM1-201ENST00000296930 SYCP2Q9BX26 1530 aa26.11■■□□□ 1.77
NPM1-201ENST00000296930 PLEKHH2Q8IVE3 1493 aa26.1■■□□□ 1.77
NPM1-201ENST00000296930 KIAA1107Q9UPP5 1409 aa26.08■■□□□ 1.77
NPM1-201ENST00000296930 AGLP35573 1532 aa26.08■■□□□ 1.76
NPM1-201ENST00000296930 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
NPM1-201ENST00000296930 HNRNPMP52272 730 aaKnown RBP eCLIP26.05■■□□□ 1.765e-7■■■■■ 31.8
NPM1-201ENST00000296930 TIAM1Q13009 1591 aa26.05■■□□□ 1.76
NPM1-201ENST00000296930 SPAG9O60271 1321 aaKnown RBP26.04■■□□□ 1.76
NPM1-201ENST00000296930 ATP7AQ04656 1500 aa25.99■■□□□ 1.75
NPM1-201ENST00000296930 SUPT6HQ7KZ85 1726 aaKnown RBP25.98■■□□□ 1.75
NPM1-201ENST00000296930 ILDR1Q86SU0 546 aaPredicted RBP25.98■■□□□ 1.75
NPM1-201ENST00000296930 VPS8Q8N3P4 1428 aa25.98■■□□□ 1.75
NPM1-201ENST00000296930 CEBPAP49715 358 aaPredicted RBP25.97■■□□□ 1.75
NPM1-201ENST00000296930 INO80Q9ULG1 1556 aaPredicted RBP25.97■■□□□ 1.75
NPM1-201ENST00000296930 PREX1Q8TCU6 1659 aa25.97■■□□□ 1.75
NPM1-201ENST00000296930 HSPA2P54652 639 aa25.96■■□□□ 1.75
NPM1-201ENST00000296930 ESF1Q9H501 851 aaKnown RBP25.96■■□□□ 1.75
NPM1-201ENST00000296930 SETD1BQ9UPS6 1966 aaKnown RBP25.95■■□□□ 1.75
NPM1-201ENST00000296930 NCOA2Q15596 1464 aa25.94■■□□□ 1.74
NPM1-201ENST00000296930 ZNF644Q9H582 1327 aaPredicted RBP25.93■■□□□ 1.74
NPM1-201ENST00000296930 C3P01024 1663 aa25.92■■□□□ 1.74
NPM1-201ENST00000296930 MBD5Q9P267 1494 aa25.91■■□□□ 1.74
NPM1-201ENST00000296930 CNTLNQ9NXG0 1405 aa25.91■■□□□ 1.74
NPM1-201ENST00000296930 A2MP01023 1474 aa25.9■■□□□ 1.74
NPM1-201ENST00000296930 PLXNC1O60486 1568 aa25.89■■□□□ 1.73
NPM1-201ENST00000296930 ADGBQ8N7X0 1667 aa25.88■■□□□ 1.73
NPM1-201ENST00000296930 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
NPM1-201ENST00000296930 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
NPM1-201ENST00000296930 RTEL1-TNFRSF6BF6WH68 1400 aa25.85■■□□□ 1.73
NPM1-201ENST00000296930 MAP3K1Q13233 1512 aa25.85■■□□□ 1.73
NPM1-201ENST00000296930 MROH2AA6NES4 1674 aa25.85■■□□□ 1.73
NPM1-201ENST00000296930 CAMSAP2Q08AD1 1489 aa25.84■■□□□ 1.73
NPM1-201ENST00000296930 RSPH4AQ5TD94 716 aa25.82■■□□□ 1.72
NPM1-201ENST00000296930 CCDC141Q6ZP82 1450 aa25.82■■□□□ 1.72
NPM1-201ENST00000296930 ZMYM3Q14202 1370 aa25.77■■□□□ 1.72
NPM1-201ENST00000296930 CLTCQ00610 1675 aaKnown RBP25.77■■□□□ 1.72
NPM1-201ENST00000296930 ARHGEF5Q12774 1597 aa25.76■■□□□ 1.71
NPM1-201ENST00000296930 GGT6Q6P531 493 aa25.76■■□□□ 1.71
NPM1-201ENST00000296930 NPATQ14207 1427 aa25.75■■□□□ 1.71
NPM1-201ENST00000296930 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
NPM1-201ENST00000296930 PPP6R1Q9UPN7 881 aa25.75■■□□□ 1.71
NPM1-201ENST00000296930 DHX29Q7Z478 1369 aaKnown RBP25.75■■□□□ 1.71
NPM1-201ENST00000296930 FBXO41Q8TF61 875 aa25.74■■□□□ 1.71
NPM1-201ENST00000296930 STRCQ7RTU9 1775 aa25.73■■□□□ 1.71
NPM1-201ENST00000296930 TSPY4P0CV99 314 aa25.71■■□□□ 1.71
NPM1-201ENST00000296930 TSPY10P0CW01 314 aa25.71■■□□□ 1.71
NPM1-201ENST00000296930 DMRT2Q9Y5R5 561 aa25.71■■□□□ 1.71
NPM1-201ENST00000296930 MYOM3Q5VTT5 1437 aa25.68■■□□□ 1.7
NPM1-201ENST00000296930 MIA2Q96PC5 1412 aa25.68■■□□□ 1.7
NPM1-201ENST00000296930 APLP2Q06481 763 aa25.68■■□□□ 1.7
NPM1-201ENST00000296930 KIF3BO15066 747 aa25.65■■□□□ 1.7
NPM1-201ENST00000296930 PTPRKQ15262 1439 aa25.64■■□□□ 1.7
NPM1-201ENST00000296930 MAST1Q9Y2H9 1570 aa25.63■■□□□ 1.69
NPM1-201ENST00000296930 FAM135AQ9P2D6 1515 aa25.62■■□□□ 1.69
NPM1-201ENST00000296930 MYO3AQ8NEV4 1616 aa25.61■■□□□ 1.69
NPM1-201ENST00000296930 ZNF142P52746 1687 aaPredicted RBP25.6■■□□□ 1.69
NPM1-201ENST00000296930 PTPRTO14522 1441 aa25.6■■□□□ 1.69
NPM1-201ENST00000296930 NCOA1Q15788 1441 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms