RNA–Protein interactions for RNA: ENST00000279242.6

MRPL49-201, Transcript of mitochondrial ribosomal protein L49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL49, Length 2,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-201ENST00000279242 POLR1AO95602 1720 aaPredicted RBP22.09■■□□□ 1.13
MRPL49-201ENST00000279242 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
MRPL49-201ENST00000279242 KIAA0556O60303 1618 aa22.09■■□□□ 1.13
MRPL49-201ENST00000279242 CDK11AQ9UQ88 783 aaPredicted RBP22.07■■□□□ 1.12
MRPL49-201ENST00000279242 L3MBTL2Q969R5 705 aa22.06■■□□□ 1.12
MRPL49-201ENST00000279242 ABCC5O15440 1437 aa22.05■■□□□ 1.12
MRPL49-201ENST00000279242 HNRNPUQ00839 825 aaKnown RBP eCLIP22.05■■□□□ 1.12
MRPL49-201ENST00000279242 TEX14Q8IWB6 1497 aa22.05■■□□□ 1.12
MRPL49-201ENST00000279242 RAPGEF6Q8TEU7 1601 aa22.04■■□□□ 1.12
MRPL49-201ENST00000279242 CCDC7Q96M83 1385 aa22.04■■□□□ 1.12
MRPL49-201ENST00000279242 DISP1Q96F81 1524 aa22.04■■□□□ 1.12
MRPL49-201ENST00000279242 NUP153P49790 1475 aaKnown RBP22.02■■□□□ 1.11
MRPL49-201ENST00000279242 ITSN2Q9NZM3 1697 aa22■■□□□ 1.11
MRPL49-201ENST00000279242 RBM19Q9Y4C8 960 aaKnown RBP22■■□□□ 1.11
MRPL49-201ENST00000279242 SPATA31E1Q6ZUB1 1445 aa21.99■■□□□ 1.11
MRPL49-201ENST00000279242 ADGBQ8N7X0 1667 aa21.98■■□□□ 1.11
MRPL49-201ENST00000279242 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
MRPL49-201ENST00000279242 ADCY10Q96PN6 1610 aa21.95■■□□□ 1.11
MRPL49-201ENST00000279242 ADGRL2O95490 1459 aa21.95■■□□□ 1.1
MRPL49-201ENST00000279242 TROQ12816 1431 aaPredicted RBP21.95■■□□□ 1.1
MRPL49-201ENST00000279242 GRIN2AQ12879 1464 aa21.94■■□□□ 1.1
MRPL49-201ENST00000279242 SLC4A1APQ9BWU0 796 aaKnown RBP21.92■■□□□ 1.1
MRPL49-201ENST00000279242 ZBED9Q6R2W3 1325 aa21.92■■□□□ 1.1
MRPL49-201ENST00000279242 ARID4BQ4LE39 1312 aaPredicted RBP21.91■■□□□ 1.1
MRPL49-201ENST00000279242 PZPP20742 1482 aa21.9■■□□□ 1.1
MRPL49-201ENST00000279242 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
MRPL49-201ENST00000279242 CROCC2H7BZ55 1655 aa21.89■■□□□ 1.1
MRPL49-201ENST00000279242 NBPF8Q3BBV2 869 aa21.89■■□□□ 1.1
MRPL49-201ENST00000279242 MBD5Q9P267 1494 aa21.89■■□□□ 1.09
MRPL49-201ENST00000279242 ZNF608Q9ULD9 1512 aaPredicted RBP21.88■■□□□ 1.09
MRPL49-201ENST00000279242 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
MRPL49-201ENST00000279242 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
MRPL49-201ENST00000279242 MAGI1Q96QZ7 1491 aaPredicted RBP21.87■■□□□ 1.09
MRPL49-201ENST00000279242 PPP4R2Q9NY27 417 aa21.87■■□□□ 1.09
MRPL49-201ENST00000279242 KIAA1107Q9UPP5 1409 aa21.87■■□□□ 1.09
MRPL49-201ENST00000279242 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
MRPL49-201ENST00000279242 FOXD1Q16676 465 aa21.85■■□□□ 1.09
MRPL49-201ENST00000279242 FANCIQ9NVI1 1328 aa21.85■■□□□ 1.09
MRPL49-201ENST00000279242 GPATCH8Q9UKJ3 1502 aaKnown RBP21.85■■□□□ 1.09
MRPL49-201ENST00000279242 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
MRPL49-201ENST00000279242 MRS2Q9HD23 443 aa21.84■■□□□ 1.09
MRPL49-201ENST00000279242 KIF14Q15058 1648 aa21.84■■□□□ 1.09
MRPL49-201ENST00000279242 ZNF644Q9H582 1327 aaPredicted RBP21.83■■□□□ 1.09
MRPL49-201ENST00000279242 CFDP1Q9UEE9 299 aaPredicted RBP21.83■■□□□ 1.09
MRPL49-201ENST00000279242 ANKRD30AQ9BXX3 1397 aa21.82■■□□□ 1.08
MRPL49-201ENST00000279242 SHANK2Q9UPX8 1470 aa21.81■■□□□ 1.08
MRPL49-201ENST00000279242 CARMIL2Q6F5E8 1435 aa21.8■■□□□ 1.08
MRPL49-201ENST00000279242 PRG4Q92954 1404 aaPredicted RBP21.8■■□□□ 1.08
MRPL49-201ENST00000279242 UHRF1BP1Q6BDS2 1440 aa21.79■■□□□ 1.08
MRPL49-201ENST00000279242 ROCK2O75116 1388 aaKnown RBP21.79■■□□□ 1.08
MRPL49-201ENST00000279242 SYNJ2O15056 1496 aa21.79■■□□□ 1.08
MRPL49-201ENST00000279242 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
MRPL49-201ENST00000279242 CCDC184Q52MB2 194 aa21.79■■□□□ 1.08
MRPL49-201ENST00000279242 ARHGEF12Q9NZN5 1544 aa21.77■■□□□ 1.08
MRPL49-201ENST00000279242 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
MRPL49-201ENST00000279242 KDM5DQ9BY66 1539 aa21.76■■□□□ 1.07
MRPL49-201ENST00000279242 KDM5CP41229 1560 aa21.75■■□□□ 1.07
MRPL49-201ENST00000279242 CEP170Q5SW79 1584 aa21.74■■□□□ 1.07
MRPL49-201ENST00000279242 DHX29Q7Z478 1369 aaKnown RBP21.74■■□□□ 1.07
MRPL49-201ENST00000279242 USP47Q96K76 1375 aa21.74■■□□□ 1.07
MRPL49-201ENST00000279242 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
MRPL49-201ENST00000279242 SMG6Q86US8 1419 aaKnown RBP21.73■■□□□ 1.07
MRPL49-201ENST00000279242 RALGAPBQ86X10 1494 aa21.73■■□□□ 1.07
MRPL49-201ENST00000279242 PLB1Q6P1J6 1458 aa21.72■■□□□ 1.07
MRPL49-201ENST00000279242 NUP160Q12769 1436 aa21.72■■□□□ 1.07
MRPL49-201ENST00000279242 KTN1Q86UP2 1357 aaKnown RBP21.7■■□□□ 1.06
MRPL49-201ENST00000279242 BCORL1Q5H9F3 1711 aa21.7■■□□□ 1.06
MRPL49-201ENST00000279242 CDC42BPAQ5VT25 1732 aa21.69■■□□□ 1.06
MRPL49-201ENST00000279242 PKD2Q13563 968 aa21.69■■□□□ 1.06
MRPL49-201ENST00000279242 ABCA8O94911 1581 aa21.68■■□□□ 1.06
MRPL49-201ENST00000279242 ABCC10Q5T3U5 1492 aa21.68■■□□□ 1.06
MRPL49-201ENST00000279242 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
MRPL49-201ENST00000279242 CHMP7Q8WUX9 453 aaPredicted RBP21.67■■□□□ 1.06
MRPL49-201ENST00000279242 ARHGEF5Q12774 1597 aa21.66■■□□□ 1.06
MRPL49-201ENST00000279242 C9orf84Q5VXU9 1444 aa21.65■■□□□ 1.06
MRPL49-201ENST00000279242 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
MRPL49-201ENST00000279242 PTPRGP23470 1445 aa21.64■■□□□ 1.06
MRPL49-201ENST00000279242 RNF123Q5XPI4 1314 aa21.64■■□□□ 1.06
MRPL49-201ENST00000279242 JPH4Q96JJ6 628 aa21.62■■□□□ 1.05
MRPL49-201ENST00000279242 NUDCQ9Y266 331 aa21.62■■□□□ 1.05
MRPL49-201ENST00000279242 NUP155O75694 1391 aa21.61■■□□□ 1.05
MRPL49-201ENST00000279242 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
MRPL49-201ENST00000279242 KIF15Q9NS87 1388 aa21.6■■□□□ 1.05
MRPL49-201ENST00000279242 MSH5O43196 834 aa21.6■■□□□ 1.05
MRPL49-201ENST00000279242 TSPY4P0CV99 314 aa21.59■■□□□ 1.05
MRPL49-201ENST00000279242 TSPY10P0CW01 314 aa21.59■■□□□ 1.05
MRPL49-201ENST00000279242 ATP10BO94823 1461 aa21.59■■□□□ 1.05
MRPL49-201ENST00000279242 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.04
MRPL49-201ENST00000279242 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
MRPL49-201ENST00000279242 BRD4O60885 1362 aaPredicted RBP21.56■■□□□ 1.04
MRPL49-201ENST00000279242 RALBP1Q15311 655 aa21.55■■□□□ 1.04
MRPL49-201ENST00000279242 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
MRPL49-201ENST00000279242 CARD11Q9BXL7 1154 aa21.55■■□□□ 1.04
MRPL49-201ENST00000279242 E9PCH4 1651 aa21.54■■□□□ 1.04
MRPL49-201ENST00000279242 ERICH6Q7L0X2 663 aa21.53■■□□□ 1.04
MRPL49-201ENST00000279242 LRPPRCP42704 1394 aaKnown RBP21.53■■□□□ 1.04
MRPL49-201ENST00000279242 B4GALNT3Q6L9W6 998 aa21.51■■□□□ 1.03
MRPL49-201ENST00000279242 TMC1Q8TDI8 760 aa21.51■■□□□ 1.03
MRPL49-201ENST00000279242 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
MRPL49-201ENST00000279242 CCDC141Q6ZP82 1450 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms