RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 TMF1P82094 1093 aa17.22■□□□□ 0.35
NOTCH1-201ENST00000277541 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
NOTCH1-201ENST00000277541 SLKQ9H2G2 1235 aaPredicted RBP17.22■□□□□ 0.35
NOTCH1-201ENST00000277541 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
NOTCH1-201ENST00000277541 PHF14O94880 888 aa17.21■□□□□ 0.35
NOTCH1-201ENST00000277541 BAZ1BQ9UIG0 1483 aaKnown RBP17.2■□□□□ 0.34
NOTCH1-201ENST00000277541 NACADO15069 1562 aa17.2■□□□□ 0.34
NOTCH1-201ENST00000277541 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
NOTCH1-201ENST00000277541 HTATSF1O43719 755 aaKnown RBP17.19■□□□□ 0.34
NOTCH1-201ENST00000277541 IPO8O15397 1037 aaKnown RBP17.18■□□□□ 0.34
NOTCH1-201ENST00000277541 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
NOTCH1-201ENST00000277541 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
NOTCH1-201ENST00000277541 KIAA1211Q6ZU35 1233 aa17.17■□□□□ 0.34
NOTCH1-201ENST00000277541 GNL2Q13823 731 aaKnown RBP17.17■□□□□ 0.34
NOTCH1-201ENST00000277541 DDX11L8A8MPP1 907 aa17.16■□□□□ 0.34
NOTCH1-201ENST00000277541 TULP1O00294 542 aaPredicted RBP17.16■□□□□ 0.34
NOTCH1-201ENST00000277541 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
NOTCH1-201ENST00000277541 TAOK2Q9UL54 1235 aa17.15■□□□□ 0.34
NOTCH1-201ENST00000277541 TPM4P67936 248 aa17.15■□□□□ 0.34
NOTCH1-201ENST00000277541 RALBP1Q15311 655 aa17.15■□□□□ 0.34
NOTCH1-201ENST00000277541 NOC3LQ8WTT2 800 aaKnown RBP17.15■□□□□ 0.34
NOTCH1-201ENST00000277541 CSPP1Q1MSJ5 1256 aa17.14■□□□□ 0.33
NOTCH1-201ENST00000277541 VPS8Q8N3P4 1428 aa17.14■□□□□ 0.33
NOTCH1-201ENST00000277541 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
NOTCH1-201ENST00000277541 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
NOTCH1-201ENST00000277541 POGKQ9P215 609 aa17.11■□□□□ 0.33
NOTCH1-201ENST00000277541 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
NOTCH1-201ENST00000277541 GOLGA2Q08379 1002 aa17.1■□□□□ 0.33
NOTCH1-201ENST00000277541 KANK1Q14678 1352 aa17.1■□□□□ 0.33
NOTCH1-201ENST00000277541 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
NOTCH1-201ENST00000277541 GSE1Q14687 1217 aa17.09■□□□□ 0.33
NOTCH1-201ENST00000277541 PLEKHG5O94827 1062 aa17.08■□□□□ 0.33
NOTCH1-201ENST00000277541 HSPA5P11021 654 aaKnown RBP17.08■□□□□ 0.32
NOTCH1-201ENST00000277541 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
NOTCH1-201ENST00000277541 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.32
NOTCH1-201ENST00000277541 ITPRIPQ8IWB1 547 aa17.07■□□□□ 0.32
NOTCH1-201ENST00000277541 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
NOTCH1-201ENST00000277541 SETQ01105 290 aaPredicted RBP17.07■□□□□ 0.32
NOTCH1-201ENST00000277541 ROCK2O75116 1388 aaKnown RBP17.06■□□□□ 0.32
NOTCH1-201ENST00000277541 MORC1Q86VD1 984 aa17.06■□□□□ 0.32
NOTCH1-201ENST00000277541 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
NOTCH1-201ENST00000277541 EIF3AQ14152 1382 aaKnown RBP17.05■□□□□ 0.32
NOTCH1-201ENST00000277541 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
NOTCH1-201ENST00000277541 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
NOTCH1-201ENST00000277541 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
NOTCH1-201ENST00000277541 NPHP1O15259 732 aa17.03■□□□□ 0.32
NOTCH1-201ENST00000277541 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
NOTCH1-201ENST00000277541 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
NOTCH1-201ENST00000277541 ST18O60284 1047 aa17.02■□□□□ 0.31
NOTCH1-201ENST00000277541 GPATCH3Q96I76 525 aa17.01■□□□□ 0.31
NOTCH1-201ENST00000277541 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
NOTCH1-201ENST00000277541 PDE3BQ13370 1112 aa17.01■□□□□ 0.31
NOTCH1-201ENST00000277541 ABCC8Q09428 1581 aa16.97■□□□□ 0.31
NOTCH1-201ENST00000277541 A0A0U1RQG5 324 aaPredicted RBP16.97■□□□□ 0.31
NOTCH1-201ENST00000277541 CLSTN1O94985 981 aa16.97■□□□□ 0.31
NOTCH1-201ENST00000277541 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
NOTCH1-201ENST00000277541 KIF16BQ96L93 1317 aa16.97■□□□□ 0.31
NOTCH1-201ENST00000277541 CENPQQ7L2Z9 268 aaPredicted RBP16.96■□□□□ 0.31
NOTCH1-201ENST00000277541 APBB1O00213 710 aa16.96■□□□□ 0.3
NOTCH1-201ENST00000277541 FAM161AQ3B820 660 aa16.96■□□□□ 0.3
NOTCH1-201ENST00000277541 HMMRO75330 724 aa16.94■□□□□ 0.3
NOTCH1-201ENST00000277541 KIF15Q9NS87 1388 aa16.94■□□□□ 0.3
NOTCH1-201ENST00000277541 CENPJQ9HC77 1338 aaPredicted RBP16.93■□□□□ 0.3
NOTCH1-201ENST00000277541 ZBED9Q6R2W3 1325 aa16.93■□□□□ 0.3
NOTCH1-201ENST00000277541 GPS2Q13227 327 aa16.93■□□□□ 0.3
NOTCH1-201ENST00000277541 SRPK2P78362 688 aaKnown RBP16.92■□□□□ 0.3
NOTCH1-201ENST00000277541 ZNF771Q7L3S4 317 aaPredicted RBP16.92■□□□□ 0.3
NOTCH1-201ENST00000277541 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
NOTCH1-201ENST00000277541 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
NOTCH1-201ENST00000277541 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 HSP90B1P14625 803 aaKnown RBP16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 TRIM6-TRIM34B2RNG4 842 aa16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 TPM3P06753 285 aa16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
NOTCH1-201ENST00000277541 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 CHMP4AQ9BY43 222 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 SOGA1O94964 1423 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 PDE4AP27815 886 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 KIF3AQ9Y496 699 aa16.9■□□□□ 0.3
NOTCH1-201ENST00000277541 TEX35Q5T0J7 233 aa16.88■□□□□ 0.29
NOTCH1-201ENST00000277541 ERCC6Q03468 1493 aa16.88■□□□□ 0.29
NOTCH1-201ENST00000277541 U2AF1L5P0DN76 240 aaPredicted RBP16.88■□□□□ 0.29
NOTCH1-201ENST00000277541 U2AF1Q01081 240 aaKnown RBP eCLIP16.88■□□□□ 0.29
NOTCH1-201ENST00000277541 DDX49Q9Y6V7 483 aaKnown RBP16.87■□□□□ 0.29
NOTCH1-201ENST00000277541 SPAG9O60271 1321 aaKnown RBP16.87■□□□□ 0.29
NOTCH1-201ENST00000277541 GOLGA6L19H0YKK7 550 aa16.86■□□□□ 0.29
NOTCH1-201ENST00000277541 HDGFL2Q7Z4V5 671 aaPredicted RBP16.86■□□□□ 0.29
NOTCH1-201ENST00000277541 HDAC5Q9UQL6 1122 aa16.86■□□□□ 0.29
NOTCH1-201ENST00000277541 FOXD4L1Q9NU39 408 aa16.86■□□□□ 0.29
NOTCH1-201ENST00000277541 CCDC70Q6NSX1 233 aa16.85■□□□□ 0.29
NOTCH1-201ENST00000277541 MTERF4Q7Z6M4 381 aaKnown RBP16.85■□□□□ 0.29
NOTCH1-201ENST00000277541 CUX2O14529 1486 aa16.85■□□□□ 0.29
NOTCH1-201ENST00000277541 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
NOTCH1-201ENST00000277541 CARMIL1Q5VZK9 1371 aa16.83■□□□□ 0.29
NOTCH1-201ENST00000277541 PKD2Q13563 968 aa16.83■□□□□ 0.28
NOTCH1-201ENST00000277541 STK31Q9BXU1 1019 aa16.82■□□□□ 0.28
NOTCH1-201ENST00000277541 RRP1P56182 461 aaKnown RBP16.82■□□□□ 0.28
NOTCH1-201ENST00000277541 FAM43AQ8N2R8 423 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms