RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
NOTCH1-201ENST00000277541 PELP1Q8IZL8 1130 aaKnown RBP22.17■■□□□ 1.14
NOTCH1-201ENST00000277541 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
NOTCH1-201ENST00000277541 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
NOTCH1-201ENST00000277541 MYT1Q01538 1121 aa21.38■■□□□ 1.01
NOTCH1-201ENST00000277541 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
NOTCH1-201ENST00000277541 CENPBP07199 599 aaPredicted RBP21.16■□□□□ 0.98
NOTCH1-201ENST00000277541 ERICH6Q7L0X2 663 aa21.09■□□□□ 0.97
NOTCH1-201ENST00000277541 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
NOTCH1-201ENST00000277541 APLP2Q06481 763 aa21.04■□□□□ 0.96
NOTCH1-201ENST00000277541 EHMT2Q96KQ7 1210 aa21.01■□□□□ 0.95
NOTCH1-201ENST00000277541 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
NOTCH1-201ENST00000277541 PCGF6Q9BYE7 350 aa20.98■□□□□ 0.95
NOTCH1-201ENST00000277541 NEFLP07196 543 aa20.58■□□□□ 0.88
NOTCH1-201ENST00000277541 FAM9AQ8IZU1 332 aaPredicted RBP20.58■□□□□ 0.88
NOTCH1-201ENST00000277541 TTBK1Q5TCY1 1321 aaPredicted RBP20.49■□□□□ 0.87
NOTCH1-201ENST00000277541 YTHDC1Q96MU7 727 aaKnown RBP20.36■□□□□ 0.85
NOTCH1-201ENST00000277541 TRIM41Q8WV44 630 aa20.2■□□□□ 0.82
NOTCH1-201ENST00000277541 HRCP23327 699 aa20.1■□□□□ 0.81
NOTCH1-201ENST00000277541 TRIM26Q12899 539 aaPredicted RBP20.08■□□□□ 0.81
NOTCH1-201ENST00000277541 DAXXQ9UER7 740 aaPredicted RBP20.08■□□□□ 0.81
NOTCH1-201ENST00000277541 RANGAP1P46060 587 aaPredicted RBP20■□□□□ 0.79
NOTCH1-201ENST00000277541 UBTFP17480 764 aaKnown RBP19.97■□□□□ 0.79
NOTCH1-201ENST00000277541 ATP1B4Q9UN42 357 aaPredicted RBP19.89■□□□□ 0.77
NOTCH1-201ENST00000277541 RTL5Q5HYW3 569 aaPredicted RBP19.78■□□□□ 0.76
NOTCH1-201ENST00000277541 PPARGC1BQ86YN6 1023 aaKnown RBP19.65■□□□□ 0.74
NOTCH1-201ENST00000277541 ZNF316A6NFI3 1004 aaPredicted RBP19.63■□□□□ 0.73
NOTCH1-201ENST00000277541 DIEXFQ68CQ4 756 aaKnown RBP19.59■□□□□ 0.73
NOTCH1-201ENST00000277541 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
NOTCH1-201ENST00000277541 GTF3C3Q9Y5Q9 886 aa19.35■□□□□ 0.69
NOTCH1-201ENST00000277541 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
NOTCH1-201ENST00000277541 ITGAEP38570 1179 aa19.34■□□□□ 0.69
NOTCH1-201ENST00000277541 HNRNPUL2Q1KMD3 747 aaKnown RBP19.32■□□□□ 0.68
NOTCH1-201ENST00000277541 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
NOTCH1-201ENST00000277541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.29■□□□□ 0.68
NOTCH1-201ENST00000277541 CHIC1Q5VXU3 224 aa19.26■□□□□ 0.67
NOTCH1-201ENST00000277541 CDK11AQ9UQ88 783 aaPredicted RBP19.25■□□□□ 0.67
NOTCH1-201ENST00000277541 CNGB1Q14028 1251 aaPredicted RBP19.13■□□□□ 0.65
NOTCH1-201ENST00000277541 MYT1LQ9UL68 1186 aa19.12■□□□□ 0.65
NOTCH1-201ENST00000277541 BCANQ96GW7 911 aa19.12■□□□□ 0.65
NOTCH1-201ENST00000277541 ACIN1Q9UKV3 1341 aaKnown RBP19.07■□□□□ 0.64
NOTCH1-201ENST00000277541 ANP32CO43423 234 aa19.06■□□□□ 0.64
NOTCH1-201ENST00000277541 ANP32AP39687 249 aaKnown RBP19.04■□□□□ 0.64
NOTCH1-201ENST00000277541 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
NOTCH1-201ENST00000277541 GLIPR1L2Q4G1C9 344 aa18.95■□□□□ 0.62
NOTCH1-201ENST00000277541 FAM50AQ14320 339 aaKnown RBP18.89■□□□□ 0.61
NOTCH1-201ENST00000277541 ZBTB47Q9UFB7 747 aaPredicted RBP18.88■□□□□ 0.61
NOTCH1-201ENST00000277541 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
NOTCH1-201ENST00000277541 EIF5BO60841 1220 aaKnown RBP18.84■□□□□ 0.61
NOTCH1-201ENST00000277541 ANP32BQ92688 251 aaKnown RBP18.81■□□□□ 0.6
NOTCH1-201ENST00000277541 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
NOTCH1-201ENST00000277541 TRIM52Q96A61 297 aa18.77■□□□□ 0.59
NOTCH1-201ENST00000277541 DCAF1Q9Y4B6 1507 aa18.68■□□□□ 0.58
NOTCH1-201ENST00000277541 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
NOTCH1-201ENST00000277541 ZNF326Q5BKZ1 582 aaKnown RBP18.62■□□□□ 0.57
NOTCH1-201ENST00000277541 FKBP8Q14318 412 aa18.61■□□□□ 0.57
NOTCH1-201ENST00000277541 UPF2Q9HAU5 1272 aaKnown RBP18.58■□□□□ 0.57
NOTCH1-201ENST00000277541 HSP90AA1P07900 732 aaKnown RBP18.57■□□□□ 0.56
NOTCH1-201ENST00000277541 NEFMP07197 916 aa18.52■□□□□ 0.56
NOTCH1-201ENST00000277541 NBR1Q14596 966 aa18.5■□□□□ 0.55
NOTCH1-201ENST00000277541 CCDC180Q9P1Z9 1646 aa18.49■□□□□ 0.55
NOTCH1-201ENST00000277541 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
NOTCH1-201ENST00000277541 BCL11AQ9H165 835 aa18.43■□□□□ 0.54
NOTCH1-201ENST00000277541 HNRNPUQ00839 825 aaKnown RBP eCLIP18.41■□□□□ 0.54
NOTCH1-201ENST00000277541 TONSLQ96HA7 1378 aa18.4■□□□□ 0.54
NOTCH1-201ENST00000277541 CCDC136Q96JN2 1154 aa18.37■□□□□ 0.53
NOTCH1-201ENST00000277541 SLC24A1O60721 1099 aa18.34■□□□□ 0.53
NOTCH1-201ENST00000277541 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.28■□□□□ 0.52
NOTCH1-201ENST00000277541 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
NOTCH1-201ENST00000277541 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
NOTCH1-201ENST00000277541 FAM9BQ8IZU0 186 aa18.25■□□□□ 0.51
NOTCH1-201ENST00000277541 ARXQ96QS3 562 aa18.23■□□□□ 0.51
NOTCH1-201ENST00000277541 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
NOTCH1-201ENST00000277541 TNNT2P45379 298 aaPredicted RBP18.21■□□□□ 0.51
NOTCH1-201ENST00000277541 BECN1Q14457 450 aa18.19■□□□□ 0.5
NOTCH1-201ENST00000277541 TRIM44Q96DX7 344 aaPredicted RBP18.19■□□□□ 0.5
NOTCH1-201ENST00000277541 TMC1Q8TDI8 760 aa18.15■□□□□ 0.5
NOTCH1-201ENST00000277541 CSRNP3Q8WYN3 585 aa18.15■□□□□ 0.5
NOTCH1-201ENST00000277541 ABCC9O60706 1549 aa18.12■□□□□ 0.49
NOTCH1-201ENST00000277541 MIER1Q8N108 512 aa18.12■□□□□ 0.49
NOTCH1-201ENST00000277541 SCRIBQ14160 1630 aa18.09■□□□□ 0.49
NOTCH1-201ENST00000277541 MRS2Q9HD23 443 aa18.09■□□□□ 0.49
NOTCH1-201ENST00000277541 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
NOTCH1-201ENST00000277541 GOLGA6L22H0YM25 854 aa18.06■□□□□ 0.48
NOTCH1-201ENST00000277541 FBLN2P98095 1184 aa18.06■□□□□ 0.48
NOTCH1-201ENST00000277541 WDR43Q15061 677 aaKnown RBP eCLIP18.06■□□□□ 0.48
NOTCH1-201ENST00000277541 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
NOTCH1-201ENST00000277541 IRX6P78412 446 aaPredicted RBP18.02■□□□□ 0.47
NOTCH1-201ENST00000277541 PABPN1Q86U42 306 aaKnown RBP eCLIP18.02■□□□□ 0.47
NOTCH1-201ENST00000277541 SALL2Q9Y467 1007 aaPredicted RBP18■□□□□ 0.47
NOTCH1-201ENST00000277541 PPM1GO15355 546 aaPredicted RBP18■□□□□ 0.47
NOTCH1-201ENST00000277541 P3H3Q8IVL6 736 aa17.99■□□□□ 0.47
NOTCH1-201ENST00000277541 NCLP19338 710 aaKnown RBP17.99■□□□□ 0.47
NOTCH1-201ENST00000277541 ZNF777Q9ULD5 760 aaPredicted RBP17.98■□□□□ 0.47
NOTCH1-201ENST00000277541 NAP1L5Q96NT1 182 aaPredicted RBP17.94■□□□□ 0.46
NOTCH1-201ENST00000277541 NOP58Q9Y2X3 529 aaKnown RBP17.93■□□□□ 0.46
NOTCH1-201ENST00000277541 PTMAP06454 111 aaKnown RBP17.91■□□□□ 0.46
NOTCH1-201ENST00000277541 CDK11BP21127 795 aaKnown RBP17.91■□□□□ 0.46
NOTCH1-201ENST00000277541 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
NOTCH1-201ENST00000277541 DNTTIP2Q5QJE6 756 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms