RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 POGZQ7Z3K3 1410 aa27.79■■■□□ 2.04
SEC22C-202ENST00000273156 RICTORQ6R327 1708 aa27.78■■■□□ 2.04
SEC22C-202ENST00000273156 LRRIQ1Q96JM4 1722 aa27.78■■■□□ 2.04
SEC22C-202ENST00000273156 ARHGAP5Q13017 1502 aa27.77■■■□□ 2.04
SEC22C-202ENST00000273156 ARHGEF40Q8TER5 1519 aa27.76■■■□□ 2.03
SEC22C-202ENST00000273156 ZFYVE16Q7Z3T8 1539 aa27.72■■■□□ 2.03
SEC22C-202ENST00000273156 ZNF518AQ6AHZ1 1483 aa27.71■■■□□ 2.03
SEC22C-202ENST00000273156 VPS8Q8N3P4 1428 aa27.69■■■□□ 2.02
SEC22C-202ENST00000273156 YEATS2Q9ULM3 1422 aa27.67■■■□□ 2.02
SEC22C-202ENST00000273156 MTUS2Q5JR59 1369 aa27.66■■■□□ 2.02
SEC22C-202ENST00000273156 AFAP1Q8N556 730 aa27.64■■■□□ 2.02
SEC22C-202ENST00000273156 PREX2Q70Z35 1606 aa27.63■■■□□ 2.01
SEC22C-202ENST00000273156 ADAMTSL3P82987 1691 aa27.63■■■□□ 2.01
SEC22C-202ENST00000273156 ATP10AO60312 1499 aa27.62■■■□□ 2.01
SEC22C-202ENST00000273156 BCORL1Q5H9F3 1711 aa27.6■■■□□ 2.01
SEC22C-202ENST00000273156 PTPRMP28827 1452 aa27.6■■■□□ 2.01
SEC22C-202ENST00000273156 MYT1LQ9UL68 1186 aa27.6■■■□□ 2.01
SEC22C-202ENST00000273156 CCNB3Q8WWL7 1395 aa27.59■■■□□ 2.01
SEC22C-202ENST00000273156 CDC42BPBQ9Y5S2 1711 aa27.59■■■□□ 2.01
SEC22C-202ENST00000273156 C9orf84Q5VXU9 1444 aa27.58■■■□□ 2.01
SEC22C-202ENST00000273156 KDM5CP41229 1560 aa27.58■■■□□ 2.01
SEC22C-202ENST00000273156 GPATCH8Q9UKJ3 1502 aaKnown RBP27.58■■■□□ 2.01
SEC22C-202ENST00000273156 CFDP1Q9UEE9 299 aaPredicted RBP27.57■■■□□ 2
SEC22C-202ENST00000273156 ABCC1P33527 1531 aa27.56■■■□□ 2
SEC22C-202ENST00000273156 ZNF777Q9ULD5 760 aaPredicted RBP27.56■■■□□ 2
SEC22C-202ENST00000273156 MLH3Q9UHC1 1453 aa27.55■■■□□ 2
SEC22C-202ENST00000273156 APLP2Q06481 763 aa27.54■■■□□ 2
SEC22C-202ENST00000273156 TRAPPC8Q9Y2L5 1435 aa27.52■■■□□ 2
SEC22C-202ENST00000273156 EHBP1L1Q8N3D4 1523 aa27.52■■■□□ 2
SEC22C-202ENST00000273156 CDC42BPAQ5VT25 1732 aa27.52■■■□□ 2
SEC22C-202ENST00000273156 PLEKHH2Q8IVE3 1493 aa27.52■■■□□ 2
SEC22C-202ENST00000273156 MADDQ8WXG6 1647 aa27.51■■□□□ 1.99
SEC22C-202ENST00000273156 ARHGEF12Q9NZN5 1544 aa27.51■■□□□ 1.99
SEC22C-202ENST00000273156 HECW2Q9P2P5 1572 aa27.5■■□□□ 1.99
SEC22C-202ENST00000273156 KIAA1107Q9UPP5 1409 aa27.5■■□□□ 1.99
SEC22C-202ENST00000273156 MLECQ14165 292 aa27.49■■□□□ 1.99
SEC22C-202ENST00000273156 TRIM26Q12899 539 aaPredicted RBP27.48■■□□□ 1.99
SEC22C-202ENST00000273156 PPARGC1BQ86YN6 1023 aaKnown RBP27.46■■□□□ 1.99
SEC22C-202ENST00000273156 ITSN2Q9NZM3 1697 aa27.44■■□□□ 1.98
SEC22C-202ENST00000273156 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.98
SEC22C-202ENST00000273156 SAMD9LQ8IVG5 1584 aa27.43■■□□□ 1.98
SEC22C-202ENST00000273156 REREQ9P2R6 1566 aa27.43■■□□□ 1.98
SEC22C-202ENST00000273156 SPAG9O60271 1321 aaKnown RBP27.43■■□□□ 1.98
SEC22C-202ENST00000273156 DIP2CQ9Y2E4 1556 aa27.41■■□□□ 1.98
SEC22C-202ENST00000273156 SYCP2Q9BX26 1530 aa27.41■■□□□ 1.98
SEC22C-202ENST00000273156 SIGLEC1Q9BZZ2 1709 aa27.39■■□□□ 1.98
SEC22C-202ENST00000273156 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.98
SEC22C-202ENST00000273156 PCGF6Q9BYE7 350 aa27.38■■□□□ 1.97
SEC22C-202ENST00000273156 TIAM1Q13009 1591 aa27.37■■□□□ 1.97
SEC22C-202ENST00000273156 AGLP35573 1532 aa27.37■■□□□ 1.97
SEC22C-202ENST00000273156 NCOA2Q15596 1464 aa27.35■■□□□ 1.97
SEC22C-202ENST00000273156 ABCA6Q8N139 1617 aa27.35■■□□□ 1.97
SEC22C-202ENST00000273156 ESF1Q9H501 851 aaKnown RBP27.34■■□□□ 1.97
SEC22C-202ENST00000273156 MAP3K1Q13233 1512 aa27.34■■□□□ 1.97
SEC22C-202ENST00000273156 SUPT6HQ7KZ85 1726 aaKnown RBP27.32■■□□□ 1.96
SEC22C-202ENST00000273156 RSPH4AQ5TD94 716 aa27.32■■□□□ 1.96
SEC22C-202ENST00000273156 KIDINS220Q9ULH0 1771 aa27.32■■□□□ 1.96
SEC22C-202ENST00000273156 ZNF644Q9H582 1327 aaPredicted RBP27.32■■□□□ 1.96
SEC22C-202ENST00000273156 PLPPR3Q6T4P5 718 aa27.31■■□□□ 1.96
SEC22C-202ENST00000273156 LRRC9Q6ZRR7 1453 aa27.31■■□□□ 1.96
SEC22C-202ENST00000273156 FER1L4A9Z1Z3 1794 aa27.31■■□□□ 1.96
SEC22C-202ENST00000273156 ATP7AQ04656 1500 aa27.28■■□□□ 1.96
SEC22C-202ENST00000273156 LMTK3Q96Q04 1460 aa27.27■■□□□ 1.96
SEC22C-202ENST00000273156 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
SEC22C-202ENST00000273156 RTEL1-TNFRSF6BF6WH68 1400 aa27.25■■□□□ 1.95
SEC22C-202ENST00000273156 CNTLNQ9NXG0 1405 aa27.24■■□□□ 1.95
SEC22C-202ENST00000273156 INO80Q9ULG1 1556 aaPredicted RBP27.23■■□□□ 1.95
SEC22C-202ENST00000273156 A2MP01023 1474 aa27.22■■□□□ 1.95
SEC22C-202ENST00000273156 CEBPAP49715 358 aaPredicted RBP27.2■■□□□ 1.95
SEC22C-202ENST00000273156 KANK4Q5T7N3 995 aaPredicted RBP27.2■■□□□ 1.95
SEC22C-202ENST00000273156 CAMSAP2Q08AD1 1489 aa27.2■■□□□ 1.94
SEC22C-202ENST00000273156 CCDC141Q6ZP82 1450 aa27.2■■□□□ 1.94
SEC22C-202ENST00000273156 PPP6R1Q9UPN7 881 aa27.18■■□□□ 1.94
SEC22C-202ENST00000273156 TSPY4P0CV99 314 aa27.17■■□□□ 1.94
SEC22C-202ENST00000273156 TSPY10P0CW01 314 aa27.17■■□□□ 1.94
SEC22C-202ENST00000273156 MIA2Q96PC5 1412 aa27.15■■□□□ 1.94
SEC22C-202ENST00000273156 PLXNC1O60486 1568 aa27.15■■□□□ 1.94
SEC22C-202ENST00000273156 HSPA2P54652 639 aa27.13■■□□□ 1.93
SEC22C-202ENST00000273156 DHX29Q7Z478 1369 aaKnown RBP27.12■■□□□ 1.93
SEC22C-202ENST00000273156 MYOM3Q5VTT5 1437 aa27.12■■□□□ 1.93
SEC22C-202ENST00000273156 UHRF1BP1Q6BDS2 1440 aa27.11■■□□□ 1.93
SEC22C-202ENST00000273156 ADGBQ8N7X0 1667 aa27.1■■□□□ 1.93
SEC22C-202ENST00000273156 ARHGEF5Q12774 1597 aa27.1■■□□□ 1.93
SEC22C-202ENST00000273156 GGT6Q6P531 493 aa27.1■■□□□ 1.93
SEC22C-202ENST00000273156 ZMYM3Q14202 1370 aa27.07■■□□□ 1.92
SEC22C-202ENST00000273156 PREX1Q8TCU6 1659 aa27.06■■□□□ 1.92
SEC22C-202ENST00000273156 SETD1BQ9UPS6 1966 aaKnown RBP27.05■■□□□ 1.92
SEC22C-202ENST00000273156 NPATQ14207 1427 aa27.05■■□□□ 1.92
SEC22C-202ENST00000273156 C3P01024 1663 aa27.03■■□□□ 1.92
SEC22C-202ENST00000273156 KIF3BO15066 747 aa27.01■■□□□ 1.92
SEC22C-202ENST00000273156 MROH2AA6NES4 1674 aa27.01■■□□□ 1.91
SEC22C-202ENST00000273156 DMRT2Q9Y5R5 561 aa27.01■■□□□ 1.91
SEC22C-202ENST00000273156 ILDR1Q86SU0 546 aaPredicted RBP26.96■■□□□ 1.91
SEC22C-202ENST00000273156 MAST1Q9Y2H9 1570 aa26.95■■□□□ 1.9
SEC22C-202ENST00000273156 FAM135AQ9P2D6 1515 aa26.95■■□□□ 1.9
SEC22C-202ENST00000273156 WASHC2CQ9Y4E1 1318 aa26.92■■□□□ 1.9
SEC22C-202ENST00000273156 CLTCQ00610 1675 aaKnown RBP26.91■■□□□ 1.9
SEC22C-202ENST00000273156 PTPRKQ15262 1439 aa26.91■■□□□ 1.9
SEC22C-202ENST00000273156 FGD6Q6ZV73 1430 aa26.9■■□□□ 1.9
SEC22C-202ENST00000273156 SHANK2Q9UPX8 1470 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms