RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 NISCHQ9Y2I1 1504 aa42.55■■■■■ 4.4
SEC22C-202ENST00000273156 CCDC180Q9P1Z9 1646 aa37.97■■■■□ 3.67
SEC22C-202ENST00000273156 ABCC9O60706 1549 aa37.57■■■■□ 3.6
SEC22C-202ENST00000273156 RB1CC1Q8TDY2 1594 aa36■■■■□ 3.35
SEC22C-202ENST00000273156 NACADO15069 1562 aa35.89■■■■□ 3.34
SEC22C-202ENST00000273156 DCAF8L2P0C7V8 631 aa35.8■■■■□ 3.32
SEC22C-202ENST00000273156 MYO15BQ96JP2 1530 aa35.58■■■■□ 3.29
SEC22C-202ENST00000273156 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
SEC22C-202ENST00000273156 DCAF1Q9Y4B6 1507 aa35.25■■■■□ 3.23
SEC22C-202ENST00000273156 PABPN1Q86U42 306 aaKnown RBP eCLIP35.07■■■■□ 3.21
SEC22C-202ENST00000273156 UNC13AQ9UPW8 1703 aa34.94■■■■□ 3.18
SEC22C-202ENST00000273156 DNAJC5BQ9UF47 199 aa34.85■■■■□ 3.17
SEC22C-202ENST00000273156 BICRAQ9NZM4 1560 aa34.82■■■■□ 3.16
SEC22C-202ENST00000273156 SHROOM4Q9ULL8 1493 aa34.62■■■■□ 3.13
SEC22C-202ENST00000273156 SCRIBQ14160 1630 aa34.57■■■■□ 3.12
SEC22C-202ENST00000273156 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
SEC22C-202ENST00000273156 CC2D2AQ9P2K1 1620 aa33.93■■■■□ 3.02
SEC22C-202ENST00000273156 CECR2Q9BXF3 1484 aa33.86■■■■□ 3.01
SEC22C-202ENST00000273156 NCAPD3P42695 1498 aa33.14■■■□□ 2.9
SEC22C-202ENST00000273156 SMARCA4P51532 1647 aa33.05■■■□□ 2.88
SEC22C-202ENST00000273156 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
SEC22C-202ENST00000273156 BAZ1AQ9NRL2 1556 aaPredicted RBP33.03■■■□□ 2.88
SEC22C-202ENST00000273156 SMARCA2P51531 1590 aa33.02■■■□□ 2.88
SEC22C-202ENST00000273156 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
SEC22C-202ENST00000273156 PEG3Q9GZU2 1588 aa32.79■■■□□ 2.84
SEC22C-202ENST00000273156 BAZ1BQ9UIG0 1483 aaKnown RBP32.77■■■□□ 2.84
SEC22C-202ENST00000273156 MROH2BQ7Z745 1585 aa32.74■■■□□ 2.83
SEC22C-202ENST00000273156 ERCC6Q03468 1493 aa32.49■■■□□ 2.79
SEC22C-202ENST00000273156 NESP48681 1621 aa32.34■■■□□ 2.77
SEC22C-202ENST00000273156 CUX2O14529 1486 aa32.31■■■□□ 2.76
SEC22C-202ENST00000273156 WIZO95785 1651 aa32.3■■■□□ 2.76
SEC22C-202ENST00000273156 LAMC3Q9Y6N6 1575 aa32.29■■■□□ 2.76
SEC22C-202ENST00000273156 RSF1Q96T23 1441 aaPredicted RBP32.28■■■□□ 2.76
SEC22C-202ENST00000273156 PDS5BQ9NTI5 1447 aa32.18■■■□□ 2.74
SEC22C-202ENST00000273156 CADPSQ9ULU8 1353 aa32.17■■■□□ 2.74
SEC22C-202ENST00000273156 TOP2AP11388 1531 aaKnown RBP32.03■■■□□ 2.72
SEC22C-202ENST00000273156 THOC2Q8NI27 1593 aaKnown RBP31.92■■■□□ 2.7
SEC22C-202ENST00000273156 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
SEC22C-202ENST00000273156 CFTRP13569 1480 aa31.86■■■□□ 2.69
SEC22C-202ENST00000273156 DNAJC5Q9H3Z4 198 aa31.84■■■□□ 2.69
SEC22C-202ENST00000273156 MRC2Q9UBG0 1479 aa31.8■■■□□ 2.68
SEC22C-202ENST00000273156 CEP164Q9UPV0 1460 aa31.75■■■□□ 2.67
SEC22C-202ENST00000273156 FANCD2Q9BXW9 1451 aa31.75■■■□□ 2.67
SEC22C-202ENST00000273156 WDR62O43379 1518 aa31.67■■■□□ 2.66
SEC22C-202ENST00000273156 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
SEC22C-202ENST00000273156 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
SEC22C-202ENST00000273156 URB2Q14146 1524 aaKnown RBP31.4■■■□□ 2.62
SEC22C-202ENST00000273156 PRDM2Q13029 1718 aa31.39■■■□□ 2.61
SEC22C-202ENST00000273156 ABCC8Q09428 1581 aa31.26■■■□□ 2.59
SEC22C-202ENST00000273156 TOPBP1Q92547 1522 aa31.16■■■□□ 2.58
SEC22C-202ENST00000273156 IFT140Q96RY7 1462 aa31.14■■■□□ 2.58
SEC22C-202ENST00000273156 DNMBPQ6XZF7 1577 aa31.09■■■□□ 2.57
SEC22C-202ENST00000273156 OSCARQ8IYS5 282 aa30.97■■■□□ 2.55
SEC22C-202ENST00000273156 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
SEC22C-202ENST00000273156 POLA1P09884 1462 aaPredicted RBP30.87■■■□□ 2.53
SEC22C-202ENST00000273156 TARBP1Q13395 1621 aaKnown RBP30.81■■■□□ 2.52
SEC22C-202ENST00000273156 SOGA1O94964 1423 aa30.8■■■□□ 2.52
SEC22C-202ENST00000273156 EIF4G3O43432 1585 aaKnown RBP30.77■■■□□ 2.52
SEC22C-202ENST00000273156 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.511e-6■■■■■ 30.6
SEC22C-202ENST00000273156 CUX1P39880 1505 aa30.74■■■□□ 2.51
SEC22C-202ENST00000273156 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
SEC22C-202ENST00000273156 RAD54L2Q9Y4B4 1467 aa30.72■■■□□ 2.51
SEC22C-202ENST00000273156 TDRD9Q8NDG6 1382 aaKnown RBP30.65■■■□□ 2.5
SEC22C-202ENST00000273156 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
SEC22C-202ENST00000273156 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
SEC22C-202ENST00000273156 FBLN2P98095 1184 aa30.54■■■□□ 2.48
SEC22C-202ENST00000273156 GRIN2BQ13224 1484 aa30.49■■■□□ 2.47
SEC22C-202ENST00000273156 WRNQ14191 1432 aaPredicted RBP eCLIP30.47■■■□□ 2.47
SEC22C-202ENST00000273156 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
SEC22C-202ENST00000273156 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
SEC22C-202ENST00000273156 SNAPC4Q5SXM2 1469 aa30.45■■■□□ 2.46
SEC22C-202ENST00000273156 CHMP7Q8WUX9 453 aaPredicted RBP30.43■■■□□ 2.46
SEC22C-202ENST00000273156 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
SEC22C-202ENST00000273156 TOP2BQ02880 1626 aa30.39■■■□□ 2.46
SEC22C-202ENST00000273156 CHD1O14646 1710 aa30.38■■■□□ 2.45
SEC22C-202ENST00000273156 BIVM-ERCC5R4GMW8 1640 aa30.34■■■□□ 2.45
SEC22C-202ENST00000273156 SYNJ2O15056 1496 aa30.34■■■□□ 2.45
SEC22C-202ENST00000273156 ARHGEF11O15085 1522 aa30.33■■■□□ 2.45
SEC22C-202ENST00000273156 RIMBP3CA6NJZ7 1639 aa30.31■■■□□ 2.44
SEC22C-202ENST00000273156 RIMBP3BA6NNM3 1639 aa30.31■■■□□ 2.44
SEC22C-202ENST00000273156 RIMBP3Q9UFD9 1639 aa30.31■■■□□ 2.44
SEC22C-202ENST00000273156 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
SEC22C-202ENST00000273156 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
SEC22C-202ENST00000273156 PBRM1Q86U86 1689 aa30.22■■■□□ 2.43
SEC22C-202ENST00000273156 CLASP1Q7Z460 1538 aa30.16■■■□□ 2.42
SEC22C-202ENST00000273156 CYB5RLQ6IPT4 315 aa30.15■■■□□ 2.42
SEC22C-202ENST00000273156 ERICH3Q5RHP9 1530 aa30.09■■■□□ 2.41
SEC22C-202ENST00000273156 FHAD1B1AJZ9 1412 aa30.08■■■□□ 2.41
SEC22C-202ENST00000273156 GRIN2AQ12879 1464 aa30.06■■■□□ 2.4
SEC22C-202ENST00000273156 ARAP1Q96P48 1450 aa30.04■■■□□ 2.4
SEC22C-202ENST00000273156 ADAMTS12P58397 1594 aa30.03■■■□□ 2.4
SEC22C-202ENST00000273156 CHIC1Q5VXU3 224 aa30■■■□□ 2.39
SEC22C-202ENST00000273156 NUP160Q12769 1436 aa29.96■■■□□ 2.39
SEC22C-202ENST00000273156 KIF27Q86VH2 1401 aa29.91■■■□□ 2.38
SEC22C-202ENST00000273156 CEP170Q5SW79 1584 aa29.85■■■□□ 2.37
SEC22C-202ENST00000273156 IGF1RP08069 1367 aa29.82■■■□□ 2.36
SEC22C-202ENST00000273156 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
SEC22C-202ENST00000273156 TRHP20396 242 aaPredicted RBP29.71■■■□□ 2.35
SEC22C-202ENST00000273156 SHROOM2Q13796 1616 aa29.7■■■□□ 2.34
SEC22C-202ENST00000273156 CUL7Q14999 1698 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms