RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 TROQ12816 1431 aaPredicted RBP25.08■■□□□ 1.61
SOD1-201ENST00000270142 LRRIQ1Q96JM4 1722 aa25.07■■□□□ 1.6
SOD1-201ENST00000270142 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
SOD1-201ENST00000270142 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
SOD1-201ENST00000270142 SIGLEC1Q9BZZ2 1709 aa25.06■■□□□ 1.6
SOD1-201ENST00000270142 EFCAB2Q5VUJ9 269 aa25.04■■□□□ 1.6
SOD1-201ENST00000270142 RIMS1Q86UR5 1692 aaKnown RBP25.03■■□□□ 1.6
SOD1-201ENST00000270142 CLIP1P30622 1438 aa25.03■■□□□ 1.6
SOD1-201ENST00000270142 PCF11O94913 1555 aaKnown RBP25.01■■□□□ 1.59
SOD1-201ENST00000270142 CASKIN1Q8WXD9 1431 aa25■■□□□ 1.59
SOD1-201ENST00000270142 ARHGAP5Q13017 1502 aa24.99■■□□□ 1.59
SOD1-201ENST00000270142 CCDC18Q5T9S5 1454 aa24.96■■□□□ 1.59
SOD1-201ENST00000270142 LMTK3Q96Q04 1460 aa24.96■■□□□ 1.59
SOD1-201ENST00000270142 MLECQ14165 292 aa24.94■■□□□ 1.58
SOD1-201ENST00000270142 ATP10AO60312 1499 aa24.94■■□□□ 1.58
SOD1-201ENST00000270142 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
SOD1-201ENST00000270142 C9orf84Q5VXU9 1444 aa24.94■■□□□ 1.58
SOD1-201ENST00000270142 KDM5CP41229 1560 aa24.92■■□□□ 1.58
SOD1-201ENST00000270142 PLPPR3Q6T4P5 718 aa24.91■■□□□ 1.58
SOD1-201ENST00000270142 CDC42BPBQ9Y5S2 1711 aa24.9■■□□□ 1.58
SOD1-201ENST00000270142 AFAP1Q8N556 730 aa24.9■■□□□ 1.58
SOD1-201ENST00000270142 FYCO1Q9BQS8 1478 aa24.89■■□□□ 1.58
SOD1-201ENST00000270142 FER1L4A9Z1Z3 1794 aa24.88■■□□□ 1.57
SOD1-201ENST00000270142 PREX2Q70Z35 1606 aa24.88■■□□□ 1.57
SOD1-201ENST00000270142 ARHGEF12Q9NZN5 1544 aa24.87■■□□□ 1.57
SOD1-201ENST00000270142 ABCC1P33527 1531 aa24.85■■□□□ 1.57
SOD1-201ENST00000270142 DIP2CQ9Y2E4 1556 aa24.83■■□□□ 1.57
SOD1-201ENST00000270142 MYT1LQ9UL68 1186 aa24.82■■□□□ 1.56
SOD1-201ENST00000270142 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
SOD1-201ENST00000270142 HSPA2P54652 639 aa24.81■■□□□ 1.56
SOD1-201ENST00000270142 MLH3Q9UHC1 1453 aa24.81■■□□□ 1.56
SOD1-201ENST00000270142 ITSN2Q9NZM3 1697 aa24.8■■□□□ 1.56
SOD1-201ENST00000270142 ABCA6Q8N139 1617 aa24.79■■□□□ 1.56
SOD1-201ENST00000270142 CDC42BPAQ5VT25 1732 aa24.79■■□□□ 1.56
SOD1-201ENST00000270142 REREQ9P2R6 1566 aa24.78■■□□□ 1.56
SOD1-201ENST00000270142 GPATCH8Q9UKJ3 1502 aaKnown RBP24.73■■□□□ 1.55
SOD1-201ENST00000270142 CEBPAP49715 358 aaPredicted RBP24.73■■□□□ 1.55
SOD1-201ENST00000270142 SAMD9LQ8IVG5 1584 aa24.71■■□□□ 1.55
SOD1-201ENST00000270142 ZNF777Q9ULD5 760 aaPredicted RBP24.71■■□□□ 1.55
SOD1-201ENST00000270142 KIDINS220Q9ULH0 1771 aa24.7■■□□□ 1.55
SOD1-201ENST00000270142 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
SOD1-201ENST00000270142 AGLP35573 1532 aa24.7■■□□□ 1.54
SOD1-201ENST00000270142 SYCP2Q9BX26 1530 aa24.69■■□□□ 1.54
SOD1-201ENST00000270142 PREX1Q8TCU6 1659 aa24.67■■□□□ 1.54
SOD1-201ENST00000270142 MTUS2Q5JR59 1369 aa24.65■■□□□ 1.54
SOD1-201ENST00000270142 HNRNPMP52272 730 aaKnown RBP eCLIP24.63■■□□□ 1.53
SOD1-201ENST00000270142 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
SOD1-201ENST00000270142 CFDP1Q9UEE9 299 aaPredicted RBP24.62■■□□□ 1.53
SOD1-201ENST00000270142 CEP162Q5TB80 1403 aa24.61■■□□□ 1.53
SOD1-201ENST00000270142 KIAA1107Q9UPP5 1409 aa24.61■■□□□ 1.53
SOD1-201ENST00000270142 SPAG9O60271 1321 aaKnown RBP24.61■■□□□ 1.53
SOD1-201ENST00000270142 C3P01024 1663 aa24.6■■□□□ 1.53
SOD1-201ENST00000270142 UHRF1BP1Q6BDS2 1440 aa24.6■■□□□ 1.53
SOD1-201ENST00000270142 PLEKHH2Q8IVE3 1493 aa24.59■■□□□ 1.53
SOD1-201ENST00000270142 EHBP1L1Q8N3D4 1523 aa24.58■■□□□ 1.53
SOD1-201ENST00000270142 ESF1Q9H501 851 aaKnown RBP24.58■■□□□ 1.53
SOD1-201ENST00000270142 TIAM1Q13009 1591 aa24.57■■□□□ 1.52
SOD1-201ENST00000270142 ATP7AQ04656 1500 aa24.56■■□□□ 1.52
SOD1-201ENST00000270142 INO80Q9ULG1 1556 aaPredicted RBP24.55■■□□□ 1.52
SOD1-201ENST00000270142 CNTLNQ9NXG0 1405 aa24.54■■□□□ 1.52
SOD1-201ENST00000270142 SETD1BQ9UPS6 1966 aaKnown RBP24.52■■□□□ 1.52
SOD1-201ENST00000270142 PLXNC1O60486 1568 aa24.51■■□□□ 1.51
SOD1-201ENST00000270142 SUPT6HQ7KZ85 1726 aaKnown RBP24.51■■□□□ 1.51
SOD1-201ENST00000270142 ZNF644Q9H582 1327 aaPredicted RBP24.51■■□□□ 1.51
SOD1-201ENST00000270142 STRCQ7RTU9 1775 aa24.5■■□□□ 1.51
SOD1-201ENST00000270142 A2MP01023 1474 aa24.5■■□□□ 1.51
SOD1-201ENST00000270142 CERKQ8TCT0 537 aa24.48■■□□□ 1.51
SOD1-201ENST00000270142 MBD5Q9P267 1494 aa24.48■■□□□ 1.51
SOD1-201ENST00000270142 MROH2AA6NES4 1674 aa24.46■■□□□ 1.51
SOD1-201ENST00000270142 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
SOD1-201ENST00000270142 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
SOD1-201ENST00000270142 NCOA2Q15596 1464 aa24.43■■□□□ 1.5
SOD1-201ENST00000270142 NPATQ14207 1427 aa24.43■■□□□ 1.5
SOD1-201ENST00000270142 CLTCQ00610 1675 aaKnown RBP24.41■■□□□ 1.5
SOD1-201ENST00000270142 ADGBQ8N7X0 1667 aa24.41■■□□□ 1.5
SOD1-201ENST00000270142 GGT6Q6P531 493 aa24.4■■□□□ 1.5
SOD1-201ENST00000270142 RTEL1-TNFRSF6BF6WH68 1400 aa24.39■■□□□ 1.5
SOD1-201ENST00000270142 PTPRTO14522 1441 aa24.38■■□□□ 1.49
SOD1-201ENST00000270142 NCOA1Q15788 1441 aa24.37■■□□□ 1.49
SOD1-201ENST00000270142 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
SOD1-201ENST00000270142 CAMSAP2Q08AD1 1489 aa24.37■■□□□ 1.49
SOD1-201ENST00000270142 CCDC141Q6ZP82 1450 aa24.36■■□□□ 1.49
SOD1-201ENST00000270142 VPS8Q8N3P4 1428 aa24.35■■□□□ 1.49
SOD1-201ENST00000270142 PTPRKQ15262 1439 aa24.34■■□□□ 1.49
SOD1-201ENST00000270142 DHX29Q7Z478 1369 aaKnown RBP24.33■■□□□ 1.49
SOD1-201ENST00000270142 CAMSAP1Q5T5Y3 1602 aa24.33■■□□□ 1.49
SOD1-201ENST00000270142 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
SOD1-201ENST00000270142 MYO3AQ8NEV4 1616 aa24.32■■□□□ 1.48
SOD1-201ENST00000270142 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
SOD1-201ENST00000270142 ZNF142P52746 1687 aaPredicted RBP24.28■■□□□ 1.48
SOD1-201ENST00000270142 RSPH4AQ5TD94 716 aa24.28■■□□□ 1.48
SOD1-201ENST00000270142 ARHGEF5Q12774 1597 aa24.26■■□□□ 1.47
SOD1-201ENST00000270142 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
SOD1-201ENST00000270142 LTBP4Q8N2S1 1624 aa24.25■■□□□ 1.47
SOD1-201ENST00000270142 KIF3BO15066 747 aa24.25■■□□□ 1.47
SOD1-201ENST00000270142 NCKAP5LQ9HCH0 1330 aa24.24■■□□□ 1.47
SOD1-201ENST00000270142 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
SOD1-201ENST00000270142 PLA2R1Q13018 1463 aa24.23■■□□□ 1.47
SOD1-201ENST00000270142 KDM5DQ9BY66 1539 aa24.21■■□□□ 1.47
SOD1-201ENST00000270142 MAP3K1Q13233 1512 aa24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms