RNA–Protein interactions for RNA: ENST00000265593.8

CLCN2-201, Transcript of chloride voltage-gated channel 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCN2, Length 3,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2-201ENST00000265593 ZNF644Q9H582 1327 aaPredicted RBP21.79■■□□□ 1.08
CLCN2-201ENST00000265593 RAPGEF6Q8TEU7 1601 aa21.79■■□□□ 1.08
CLCN2-201ENST00000265593 CHMP7Q8WUX9 453 aaPredicted RBP21.78■■□□□ 1.08
CLCN2-201ENST00000265593 FOXD1Q16676 465 aa21.78■■□□□ 1.08
CLCN2-201ENST00000265593 CDK11AQ9UQ88 783 aaPredicted RBP21.78■■□□□ 1.08
CLCN2-201ENST00000265593 DAPK1P53355 1430 aa21.78■■□□□ 1.08
CLCN2-201ENST00000265593 CCER2I3L3R5 266 aa21.77■■□□□ 1.08
CLCN2-201ENST00000265593 FBLN2P98095 1184 aa21.77■■□□□ 1.08
CLCN2-201ENST00000265593 ABCC5O15440 1437 aa21.74■■□□□ 1.07
CLCN2-201ENST00000265593 MAGI1Q96QZ7 1491 aaPredicted RBP21.73■■□□□ 1.07
CLCN2-201ENST00000265593 ROCK1Q13464 1354 aa21.72■■□□□ 1.07
CLCN2-201ENST00000265593 RBM19Q9Y4C8 960 aaKnown RBP21.72■■□□□ 1.07
CLCN2-201ENST00000265593 DNMT1P26358 1616 aaKnown RBP21.72■■□□□ 1.07
CLCN2-201ENST00000265593 PRG4Q92954 1404 aaPredicted RBP21.72■■□□□ 1.07
CLCN2-201ENST00000265593 CEP170Q5SW79 1584 aa21.7■■□□□ 1.07
CLCN2-201ENST00000265593 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.07
CLCN2-201ENST00000265593 PLB1Q6P1J6 1458 aa21.7■■□□□ 1.06
CLCN2-201ENST00000265593 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
CLCN2-201ENST00000265593 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
CLCN2-201ENST00000265593 SYNJ2O15056 1496 aa21.69■■□□□ 1.06
CLCN2-201ENST00000265593 TROQ12816 1431 aaPredicted RBP21.68■■□□□ 1.06
CLCN2-201ENST00000265593 CFDP1Q9UEE9 299 aaPredicted RBP21.67■■□□□ 1.06
CLCN2-201ENST00000265593 EIF4G2P78344 907 aaKnown RBP eCLIP21.65■■□□□ 1.06
CLCN2-201ENST00000265593 SLC4A1APQ9BWU0 796 aaKnown RBP21.65■■□□□ 1.06
CLCN2-201ENST00000265593 JPH4Q96JJ6 628 aa21.65■■□□□ 1.06
CLCN2-201ENST00000265593 WASHC2AQ641Q2 1341 aa21.65■■□□□ 1.06
CLCN2-201ENST00000265593 ZNF777Q9ULD5 760 aaPredicted RBP21.64■■□□□ 1.06
CLCN2-201ENST00000265593 ANKRD30BQ9BXX2 1392 aa21.64■■□□□ 1.05
CLCN2-201ENST00000265593 CAMSAP2Q08AD1 1489 aa21.62■■□□□ 1.05
CLCN2-201ENST00000265593 CARMIL2Q6F5E8 1435 aa21.62■■□□□ 1.05
CLCN2-201ENST00000265593 KIF14Q15058 1648 aa21.6■■□□□ 1.05
CLCN2-201ENST00000265593 RPRD2Q5VT52 1461 aaKnown RBP21.6■■□□□ 1.05
CLCN2-201ENST00000265593 GPATCH8Q9UKJ3 1502 aaKnown RBP21.6■■□□□ 1.05
CLCN2-201ENST00000265593 NUP160Q12769 1436 aa21.58■■□□□ 1.05
CLCN2-201ENST00000265593 ITSN2Q9NZM3 1697 aa21.58■■□□□ 1.04
CLCN2-201ENST00000265593 NBPF8Q3BBV2 869 aa21.57■■□□□ 1.04
CLCN2-201ENST00000265593 NCOA1Q15788 1441 aa21.55■■□□□ 1.04
CLCN2-201ENST00000265593 TEX14Q8IWB6 1497 aa21.54■■□□□ 1.04
CLCN2-201ENST00000265593 ADCY10Q96PN6 1610 aa21.53■■□□□ 1.04
CLCN2-201ENST00000265593 C11orf95C9JLR9 678 aaPredicted RBP21.53■■□□□ 1.04
CLCN2-201ENST00000265593 PZPP20742 1482 aa21.52■■□□□ 1.04
CLCN2-201ENST00000265593 PLEKHD1A6NEE1 506 aa21.52■■□□□ 1.04
CLCN2-201ENST00000265593 ADGBQ8N7X0 1667 aa21.5■■□□□ 1.03
CLCN2-201ENST00000265593 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
CLCN2-201ENST00000265593 CCDC7Q96M83 1385 aa21.48■■□□□ 1.03
CLCN2-201ENST00000265593 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
CLCN2-201ENST00000265593 HNRNPUQ00839 825 aaKnown RBP eCLIP21.48■■□□□ 1.03
CLCN2-201ENST00000265593 ADGRL2O95490 1459 aa21.47■■□□□ 1.03
CLCN2-201ENST00000265593 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
CLCN2-201ENST00000265593 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
CLCN2-201ENST00000265593 ATP10BO94823 1461 aa21.46■■□□□ 1.03
CLCN2-201ENST00000265593 ABCA8O94911 1581 aa21.46■■□□□ 1.03
CLCN2-201ENST00000265593 PKD2Q13563 968 aa21.45■■□□□ 1.02
CLCN2-201ENST00000265593 NBR1Q14596 966 aa21.44■■□□□ 1.02
CLCN2-201ENST00000265593 ANKRD50Q9ULJ7 1429 aa21.43■■□□□ 1.02
CLCN2-201ENST00000265593 KIAA1107Q9UPP5 1409 aa21.43■■□□□ 1.02
CLCN2-201ENST00000265593 CDC42BPAQ5VT25 1732 aa21.43■■□□□ 1.02
CLCN2-201ENST00000265593 ABCC10Q5T3U5 1492 aa21.41■■□□□ 1.02
CLCN2-201ENST00000265593 SPATA31E1Q6ZUB1 1445 aa21.41■■□□□ 1.02
CLCN2-201ENST00000265593 CCDC184Q52MB2 194 aa21.41■■□□□ 1.02
CLCN2-201ENST00000265593 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
CLCN2-201ENST00000265593 MSH5O43196 834 aa21.4■■□□□ 1.02
CLCN2-201ENST00000265593 KIF7Q2M1P5 1343 aa21.39■■□□□ 1.02
CLCN2-201ENST00000265593 PRKRIP1Q9H875 184 aaPredicted RBP21.39■■□□□ 1.01
CLCN2-201ENST00000265593 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
CLCN2-201ENST00000265593 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
CLCN2-201ENST00000265593 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
CLCN2-201ENST00000265593 NUP155O75694 1391 aa21.36■■□□□ 1.01
CLCN2-201ENST00000265593 HNRNPMP52272 730 aaKnown RBP eCLIP21.35■■□□□ 1.01
CLCN2-201ENST00000265593 PTPRGP23470 1445 aa21.35■■□□□ 1.01
CLCN2-201ENST00000265593 MBD5Q9P267 1494 aa21.34■■□□□ 1.01
CLCN2-201ENST00000265593 SHANK2Q9UPX8 1470 aa21.34■■□□□ 1.01
CLCN2-201ENST00000265593 MRS2Q9HD23 443 aa21.32■■□□□ 1
CLCN2-201ENST00000265593 FAM9BQ8IZU0 186 aa21.32■■□□□ 1
CLCN2-201ENST00000265593 POLR3GLQ9BT43 218 aa21.3■■□□□ 1
CLCN2-201ENST00000265593 USP47Q96K76 1375 aa21.3■■□□□ 1
CLCN2-201ENST00000265593 POLR1AO95602 1720 aaPredicted RBP21.3■■□□□ 1
CLCN2-201ENST00000265593 KIF15Q9NS87 1388 aa21.3■■□□□ 1
CLCN2-201ENST00000265593 B4GALNT3Q6L9W6 998 aa21.26■□□□□ 0.99
CLCN2-201ENST00000265593 ARHGEF5Q12774 1597 aa21.24■□□□□ 0.99
CLCN2-201ENST00000265593 BCORL1Q5H9F3 1711 aa21.23■□□□□ 0.99
CLCN2-201ENST00000265593 KDM2AQ9Y2K7 1162 aa21.23■□□□□ 0.99
CLCN2-201ENST00000265593 SAMD9LQ8IVG5 1584 aa21.22■□□□□ 0.99
CLCN2-201ENST00000265593 KDM5DQ9BY66 1539 aa21.22■□□□□ 0.99
CLCN2-201ENST00000265593 CCDC141Q6ZP82 1450 aa21.21■□□□□ 0.99
CLCN2-201ENST00000265593 CDC42BPBQ9Y5S2 1711 aa21.21■□□□□ 0.99
CLCN2-201ENST00000265593 CHD1O14646 1710 aa21.21■□□□□ 0.99
CLCN2-201ENST00000265593 KDM5CP41229 1560 aa21.21■□□□□ 0.99
CLCN2-201ENST00000265593 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
CLCN2-201ENST00000265593 UHRF1BP1Q6BDS2 1440 aa21.2■□□□□ 0.98
CLCN2-201ENST00000265593 PREX2Q70Z35 1606 aa21.19■□□□□ 0.98
CLCN2-201ENST00000265593 DEKP35659 375 aaKnown RBP21.19■□□□□ 0.98
CLCN2-201ENST00000265593 DHX29Q7Z478 1369 aaKnown RBP21.18■□□□□ 0.98
CLCN2-201ENST00000265593 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
CLCN2-201ENST00000265593 DCAF11Q8TEB1 546 aa21.18■□□□□ 0.98
CLCN2-201ENST00000265593 ARHGEF12Q9NZN5 1544 aa21.16■□□□□ 0.98
CLCN2-201ENST00000265593 RSPH4AQ5TD94 716 aa21.16■□□□□ 0.98
CLCN2-201ENST00000265593 ZBED9Q6R2W3 1325 aa21.15■□□□□ 0.98
CLCN2-201ENST00000265593 SYCP2Q9BX26 1530 aa21.14■□□□□ 0.98
CLCN2-201ENST00000265593 RTN4Q9NQC3 1192 aaKnown RBP21.14■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms