RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 FGD1P98174 961 aa17.75■□□□□ 0.43
PTPN23-201ENST00000265562 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
PTPN23-201ENST00000265562 SOGA1O94964 1423 aa17.75■□□□□ 0.43
PTPN23-201ENST00000265562 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
PTPN23-201ENST00000265562 C14orf37Q86TY3 774 aa17.74■□□□□ 0.43
PTPN23-201ENST00000265562 RSPH6AQ9H0K4 717 aa17.74■□□□□ 0.43
PTPN23-201ENST00000265562 RALBP1Q15311 655 aa17.73■□□□□ 0.43
PTPN23-201ENST00000265562 RWDD1Q9H446 243 aaPredicted RBP17.73■□□□□ 0.43
PTPN23-201ENST00000265562 ARID3AQ99856 593 aa17.73■□□□□ 0.43
PTPN23-201ENST00000265562 RAB3GAP2Q9H2M9 1393 aa17.73■□□□□ 0.43
PTPN23-201ENST00000265562 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
PTPN23-201ENST00000265562 OS9Q13438 667 aaPredicted RBP17.72■□□□□ 0.43
PTPN23-201ENST00000265562 FANCIQ9NVI1 1328 aa17.71■□□□□ 0.43
PTPN23-201ENST00000265562 HSP90AA2PQ14568 343 aaPredicted RBP17.69■□□□□ 0.42
PTPN23-201ENST00000265562 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
PTPN23-201ENST00000265562 IPO8O15397 1037 aaKnown RBP17.67■□□□□ 0.42
PTPN23-201ENST00000265562 GSE1Q14687 1217 aa17.67■□□□□ 0.42
PTPN23-201ENST00000265562 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
PTPN23-201ENST00000265562 PMFBP1Q8TBY8 1022 aa17.67■□□□□ 0.42
PTPN23-201ENST00000265562 SYAP1Q96A49 352 aaPredicted RBP17.66■□□□□ 0.42
PTPN23-201ENST00000265562 ARHGAP35Q9NRY4 1499 aa17.66■□□□□ 0.42
PTPN23-201ENST00000265562 POGKQ9P215 609 aa17.66■□□□□ 0.42
PTPN23-201ENST00000265562 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
PTPN23-201ENST00000265562 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
PTPN23-201ENST00000265562 MFAP1P55081 439 aaKnown RBP17.65■□□□□ 0.42
PTPN23-201ENST00000265562 PDE3BQ13370 1112 aa17.65■□□□□ 0.42
PTPN23-201ENST00000265562 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
PTPN23-201ENST00000265562 PDE4AP27815 886 aa17.62■□□□□ 0.41
PTPN23-201ENST00000265562 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
PTPN23-201ENST00000265562 HAP1P54257 671 aaPredicted RBP17.61■□□□□ 0.41
PTPN23-201ENST00000265562 ITPRIPQ8IWB1 547 aa17.61■□□□□ 0.41
PTPN23-201ENST00000265562 A0A0G2JS52 829 aa17.61■□□□□ 0.41
PTPN23-201ENST00000265562 FOXD1Q16676 465 aa17.6■□□□□ 0.41
PTPN23-201ENST00000265562 GOLGA2Q08379 1002 aa17.59■□□□□ 0.41
PTPN23-201ENST00000265562 PKD2Q13563 968 aa17.59■□□□□ 0.41
PTPN23-201ENST00000265562 VSIG10Q8N0Z9 540 aa17.59■□□□□ 0.41
PTPN23-201ENST00000265562 MPHOSPH9Q99550 1183 aa17.58■□□□□ 0.41
PTPN23-201ENST00000265562 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
PTPN23-201ENST00000265562 DDX11L8A8MPP1 907 aa17.57■□□□□ 0.4
PTPN23-201ENST00000265562 APBB1O00213 710 aa17.57■□□□□ 0.4
PTPN23-201ENST00000265562 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
PTPN23-201ENST00000265562 KIAA1211Q6ZU35 1233 aa17.56■□□□□ 0.4
PTPN23-201ENST00000265562 NLRP13Q86W25 1043 aa17.56■□□□□ 0.4
PTPN23-201ENST00000265562 FAM161AQ3B820 660 aa17.55■□□□□ 0.4
PTPN23-201ENST00000265562 ROCK2O75116 1388 aaKnown RBP17.55■□□□□ 0.4
PTPN23-201ENST00000265562 SLC4A3P48751 1232 aa17.54■□□□□ 0.4
PTPN23-201ENST00000265562 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
PTPN23-201ENST00000265562 HTATSF1O43719 755 aaKnown RBP17.53■□□□□ 0.4
PTPN23-201ENST00000265562 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
PTPN23-201ENST00000265562 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
PTPN23-201ENST00000265562 DHX57Q6P158 1386 aaKnown RBP17.52■□□□□ 0.4
PTPN23-201ENST00000265562 ZBED9Q6R2W3 1325 aa17.52■□□□□ 0.39
PTPN23-201ENST00000265562 L3MBTL2Q969R5 705 aa17.52■□□□□ 0.39
PTPN23-201ENST00000265562 CUX2O14529 1486 aa17.51■□□□□ 0.39
PTPN23-201ENST00000265562 FOXD4L1Q9NU39 408 aa17.51■□□□□ 0.39
PTPN23-201ENST00000265562 FMN1Q68DA7 1419 aa17.51■□□□□ 0.39
PTPN23-201ENST00000265562 CENPJQ9HC77 1338 aaPredicted RBP17.51■□□□□ 0.39
PTPN23-201ENST00000265562 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
PTPN23-201ENST00000265562 SRPK2P78362 688 aaKnown RBP17.5■□□□□ 0.39
PTPN23-201ENST00000265562 TULP1O00294 542 aaPredicted RBP17.49■□□□□ 0.39
PTPN23-201ENST00000265562 SMC4Q9NTJ3 1288 aa17.49■□□□□ 0.39
PTPN23-201ENST00000265562 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
PTPN23-201ENST00000265562 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
PTPN23-201ENST00000265562 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
PTPN23-201ENST00000265562 PHLDB1Q86UU1 1377 aa17.48■□□□□ 0.39
PTPN23-201ENST00000265562 CLUAP1Q96AJ1 413 aa17.48■□□□□ 0.39
PTPN23-201ENST00000265562 PHF14O94880 888 aa17.48■□□□□ 0.39
PTPN23-201ENST00000265562 SKOR2Q2VWA4 1001 aaPredicted RBP17.48■□□□□ 0.39
PTPN23-201ENST00000265562 CCDC88BA6NC98 1476 aa17.48■□□□□ 0.39
PTPN23-201ENST00000265562 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
PTPN23-201ENST00000265562 KANK1Q14678 1352 aa17.47■□□□□ 0.39
PTPN23-201ENST00000265562 PRKRIP1Q9H875 184 aaPredicted RBP17.46■□□□□ 0.39
PTPN23-201ENST00000265562 GNL2Q13823 731 aaKnown RBP17.46■□□□□ 0.39
PTPN23-201ENST00000265562 MYBBP1AQ9BQG0 1328 aaKnown RBP17.45■□□□□ 0.38
PTPN23-201ENST00000265562 ABCC8Q09428 1581 aa17.45■□□□□ 0.38
PTPN23-201ENST00000265562 KIF15Q9NS87 1388 aa17.45■□□□□ 0.38
PTPN23-201ENST00000265562 TPM4P67936 248 aa17.45■□□□□ 0.38
PTPN23-201ENST00000265562 RTF1Q92541 710 aaKnown RBP17.45■□□□□ 0.38
PTPN23-201ENST00000265562 DDX49Q9Y6V7 483 aaKnown RBP17.44■□□□□ 0.38
PTPN23-201ENST00000265562 ST18O60284 1047 aa17.44■□□□□ 0.38
PTPN23-201ENST00000265562 CCDC146Q8IYE0 955 aa17.44■□□□□ 0.38
PTPN23-201ENST00000265562 SMARCA2P51531 1590 aa17.42■□□□□ 0.38
PTPN23-201ENST00000265562 PLIN1O60240 522 aa17.42■□□□□ 0.38
PTPN23-201ENST00000265562 CRBNQ96SW2 442 aa17.41■□□□□ 0.38
PTPN23-201ENST00000265562 NUP155O75694 1391 aa17.41■□□□□ 0.38
PTPN23-201ENST00000265562 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
PTPN23-201ENST00000265562 HDGFL2Q7Z4V5 671 aaPredicted RBP17.4■□□□□ 0.38
PTPN23-201ENST00000265562 HMMRO75330 724 aa17.4■□□□□ 0.38
PTPN23-201ENST00000265562 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
PTPN23-201ENST00000265562 GOLGA6L1Q8N7Z2 621 aa17.4■□□□□ 0.38
PTPN23-201ENST00000265562 TRIM6-TRIM34B2RNG4 842 aa17.39■□□□□ 0.37
PTPN23-201ENST00000265562 NOL8Q76FK4 1167 aaKnown RBP17.38■□□□□ 0.37
PTPN23-201ENST00000265562 LMOD2Q6P5Q4 547 aa17.37■□□□□ 0.37
PTPN23-201ENST00000265562 SOX12O15370 315 aa17.37■□□□□ 0.37
PTPN23-201ENST00000265562 EIF3AQ14152 1382 aaKnown RBP17.36■□□□□ 0.37
PTPN23-201ENST00000265562 FOXD4L5Q5VV16 416 aaPredicted RBP17.36■□□□□ 0.37
PTPN23-201ENST00000265562 FOXD4L4Q8WXT5 416 aaPredicted RBP17.36■□□□□ 0.37
PTPN23-201ENST00000265562 ANKRD30AQ9BXX3 1397 aa17.36■□□□□ 0.37
PTPN23-201ENST00000265562 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
PTPN23-201ENST00000265562 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms