RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 CFAP44Q96MT7 982 aa22.66■■□□□ 1.22
ITGA6-201ENST00000264107 SKOR2Q2VWA4 1001 aaPredicted RBP22.66■■□□□ 1.22
ITGA6-201ENST00000264107 MTUS2Q5JR59 1369 aa22.65■■□□□ 1.22
ITGA6-201ENST00000264107 FAM161AQ3B820 660 aa22.63■■□□□ 1.21
ITGA6-201ENST00000264107 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.63■■□□□ 1.216e-8■■□□□ 12
ITGA6-201ENST00000264107 FOXD4L1Q9NU39 408 aa22.63■■□□□ 1.21
ITGA6-201ENST00000264107 CALRP27797 417 aaKnown RBP22.63■■□□□ 1.21
ITGA6-201ENST00000264107 DDX49Q9Y6V7 483 aaKnown RBP22.62■■□□□ 1.21
ITGA6-201ENST00000264107 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
ITGA6-201ENST00000264107 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
ITGA6-201ENST00000264107 HSPA5P11021 654 aaKnown RBP22.6■■□□□ 1.21
ITGA6-201ENST00000264107 RWDD1Q9H446 243 aaPredicted RBP22.6■■□□□ 1.21
ITGA6-201ENST00000264107 FGD1P98174 961 aa22.59■■□□□ 1.21
ITGA6-201ENST00000264107 TNIKQ9UKE5 1360 aa22.59■■□□□ 1.21
ITGA6-201ENST00000264107 PHF14O94880 888 aa22.59■■□□□ 1.21
ITGA6-201ENST00000264107 HTATSF1O43719 755 aaKnown RBP22.58■■□□□ 1.21
ITGA6-201ENST00000264107 KCNJ4P48050 445 aa22.57■■□□□ 1.2
ITGA6-201ENST00000264107 RB1CC1Q8TDY2 1594 aa22.56■■□□□ 1.2
ITGA6-201ENST00000264107 CDCA8Q53HL2 280 aa22.56■■□□□ 1.2
ITGA6-201ENST00000264107 NOC3LQ8WTT2 800 aaKnown RBP22.55■■□□□ 1.2
ITGA6-201ENST00000264107 TAOK2Q9UL54 1235 aa22.55■■□□□ 1.2
ITGA6-201ENST00000264107 RBM10P98175 930 aaKnown RBP22.55■■□□□ 1.2
ITGA6-201ENST00000264107 TEX35Q5T0J7 233 aa22.54■■□□□ 1.2
ITGA6-201ENST00000264107 MAPK8IP3Q9UPT6 1336 aa22.54■■□□□ 1.2
ITGA6-201ENST00000264107 PAK3O75914 559 aaPredicted RBP22.53■■□□□ 1.2
ITGA6-201ENST00000264107 PMFBP1Q8TBY8 1022 aa22.53■■□□□ 1.2
ITGA6-201ENST00000264107 MRE11P49959 708 aa22.52■■□□□ 1.2
ITGA6-201ENST00000264107 CCDC66A2RUB6 948 aa22.52■■□□□ 1.2
ITGA6-201ENST00000264107 NAP1L2Q9ULW6 460 aaPredicted RBP22.5■■□□□ 1.19
ITGA6-201ENST00000264107 CENPQQ7L2Z9 268 aaPredicted RBP22.49■■□□□ 1.19
ITGA6-201ENST00000264107 RGL3Q3MIN7 710 aa22.48■■□□□ 1.19
ITGA6-201ENST00000264107 ZMYND15Q9H091 742 aa22.48■■□□□ 1.19
ITGA6-201ENST00000264107 EXOC6Q8TAG9 804 aa22.47■■□□□ 1.19
ITGA6-201ENST00000264107 NOM1Q5C9Z4 860 aaKnown RBP22.46■■□□□ 1.19
ITGA6-201ENST00000264107 TSPY4P0CV99 314 aa22.45■■□□□ 1.19
ITGA6-201ENST00000264107 TSPY10P0CW01 314 aa22.45■■□□□ 1.19
ITGA6-201ENST00000264107 GPS2Q13227 327 aa22.45■■□□□ 1.19
ITGA6-201ENST00000264107 TPM4P67936 248 aa22.45■■□□□ 1.18
ITGA6-201ENST00000264107 ZNF592Q92610 1267 aa22.44■■□□□ 1.18
ITGA6-201ENST00000264107 CHMP5Q9NZZ3 219 aa22.44■■□□□ 1.18
ITGA6-201ENST00000264107 CCNB3Q8WWL7 1395 aa22.43■■□□□ 1.18
ITGA6-201ENST00000264107 PDE4CQ08493 712 aa22.43■■□□□ 1.18
ITGA6-201ENST00000264107 NACADO15069 1562 aa22.41■■□□□ 1.18
ITGA6-201ENST00000264107 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
ITGA6-201ENST00000264107 FOXD4L5Q5VV16 416 aaPredicted RBP22.41■■□□□ 1.18
ITGA6-201ENST00000264107 FOXD4L4Q8WXT5 416 aaPredicted RBP22.41■■□□□ 1.18
ITGA6-201ENST00000264107 RRP1P56182 461 aaKnown RBP22.39■■□□□ 1.18
ITGA6-201ENST00000264107 ZBED9Q6R2W3 1325 aa22.38■■□□□ 1.17
ITGA6-201ENST00000264107 KTN1Q86UP2 1357 aaKnown RBP22.38■■□□□ 1.17
ITGA6-201ENST00000264107 OS9Q13438 667 aaPredicted RBP22.38■■□□□ 1.17
ITGA6-201ENST00000264107 FRAT2O75474 233 aaPredicted RBP22.37■■□□□ 1.17
ITGA6-201ENST00000264107 MSH5O43196 834 aa22.37■■□□□ 1.17
ITGA6-201ENST00000264107 WRNQ14191 1432 aaPredicted RBP eCLIP22.37■■□□□ 1.17
ITGA6-201ENST00000264107 ITPRIPQ8IWB1 547 aa22.37■■□□□ 1.17
ITGA6-201ENST00000264107 NASPP49321 788 aaPredicted RBP22.36■■□□□ 1.17
ITGA6-201ENST00000264107 RALBP1Q15311 655 aa22.36■■□□□ 1.17
ITGA6-201ENST00000264107 STAG3Q9UJ98 1225 aa22.35■■□□□ 1.17
ITGA6-201ENST00000264107 DIAPH3Q9NSV4 1193 aa22.35■■□□□ 1.17
ITGA6-201ENST00000264107 CCAR2Q8N163 923 aaKnown RBP22.35■■□□□ 1.17
ITGA6-201ENST00000264107 KIF16BQ96L93 1317 aa22.35■■□□□ 1.17
ITGA6-201ENST00000264107 GNL2Q13823 731 aaKnown RBP22.35■■□□□ 1.17
ITGA6-201ENST00000264107 APBB1O00213 710 aa22.34■■□□□ 1.17
ITGA6-201ENST00000264107 ST18O60284 1047 aa22.34■■□□□ 1.17
ITGA6-201ENST00000264107 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
ITGA6-201ENST00000264107 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
ITGA6-201ENST00000264107 NPM1P06748 294 aaKnown RBP eCLIP22.33■■□□□ 1.17
ITGA6-201ENST00000264107 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
ITGA6-201ENST00000264107 SETD5Q9C0A6 1442 aa22.33■■□□□ 1.16
ITGA6-201ENST00000264107 KIAA1211Q6ZU35 1233 aa22.32■■□□□ 1.16
ITGA6-201ENST00000264107 CCDC39Q9UFE4 941 aa22.32■■□□□ 1.16
ITGA6-201ENST00000264107 TULP1O00294 542 aaPredicted RBP22.32■■□□□ 1.16
ITGA6-201ENST00000264107 PPP1R15AO75807 674 aaPredicted RBP22.32■■□□□ 1.16
ITGA6-201ENST00000264107 MAPK8IP2Q13387 824 aaPredicted RBP22.32■■□□□ 1.16
ITGA6-201ENST00000264107 CRBNQ96SW2 442 aa22.31■■□□□ 1.16
ITGA6-201ENST00000264107 PLIN1O60240 522 aa22.31■■□□□ 1.16
ITGA6-201ENST00000264107 CWC15Q9P013 229 aaKnown RBP22.31■■□□□ 1.16
ITGA6-201ENST00000264107 U2SURPO15042 1029 aaKnown RBP22.31■■□□□ 1.16
ITGA6-201ENST00000264107 NOL8Q76FK4 1167 aaKnown RBP22.31■■□□□ 1.16
ITGA6-201ENST00000264107 GOLGA2Q08379 1002 aa22.29■■□□□ 1.16
ITGA6-201ENST00000264107 ESF1Q9H501 851 aaKnown RBP22.28■■□□□ 1.16
ITGA6-201ENST00000264107 TRAK2O60296 914 aa22.28■■□□□ 1.16
ITGA6-201ENST00000264107 TMF1P82094 1093 aa22.28■■□□□ 1.16
ITGA6-201ENST00000264107 TAF3Q5VWG9 929 aa22.27■■□□□ 1.16
ITGA6-201ENST00000264107 HMGN5P82970 282 aaKnown RBP22.25■■□□□ 1.15
ITGA6-201ENST00000264107 GOLGA6L19H0YKK7 550 aa22.25■■□□□ 1.15
ITGA6-201ENST00000264107 ARGLU1Q9NWB6 273 aaPredicted RBP22.25■■□□□ 1.15
ITGA6-201ENST00000264107 CCDC173Q0VFZ6 552 aa22.25■■□□□ 1.15
ITGA6-201ENST00000264107 TPM3P06753 285 aa22.25■■□□□ 1.15
ITGA6-201ENST00000264107 PATL2C9JE40 543 aaKnown RBP22.24■■□□□ 1.15
ITGA6-201ENST00000264107 UQCRHLA0A096LP55 91 aa22.24■■□□□ 1.15
ITGA6-201ENST00000264107 UQCRHP07919 91 aa22.24■■□□□ 1.15
ITGA6-201ENST00000264107 CLUAP1Q96AJ1 413 aa22.23■■□□□ 1.15
ITGA6-201ENST00000264107 ESPNB1AK53 854 aa22.23■■□□□ 1.15
ITGA6-201ENST00000264107 CEP164Q9UPV0 1460 aa22.23■■□□□ 1.15
ITGA6-201ENST00000264107 FOXD4L6Q3SYB3 417 aaPredicted RBP22.22■■□□□ 1.15
ITGA6-201ENST00000264107 FOXD4L3Q6VB84 417 aaPredicted RBP22.22■■□□□ 1.15
ITGA6-201ENST00000264107 IFT57Q9NWB7 429 aa22.21■■□□□ 1.15
ITGA6-201ENST00000264107 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
ITGA6-201ENST00000264107 RAB3GAP2Q9H2M9 1393 aa22.2■■□□□ 1.14
ITGA6-201ENST00000264107 PDCL3Q9H2J4 239 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms